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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0205500 |
| Transcript ID | LotjaGi5g1v0205500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT5G18460.1 carboxyl-terminal peptidase (DUF239); Swiss-Prot: sp|Q9DDE3|ACES_DANRE Acetylcholinesterase; TrEMBL-Plants: tr|I1NIL2|I1NIL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0205500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50783684..50787146) extracted from Lotus japonicus Gifu genome v1.2.
TCTTGATGCTGAAGCTTCAAAAGGGTCTCTTAGAATCACCTTAATTGATATCTCACCCACCTCCCCCCTCCCCCCTCACA ATAATATTACAAGTCGTTTTCCAACTTGTTTTTTCTTGTTTGTGTTTGTGTAATATTACCCATGAAACACTTCAAATATA TTTGTGCTGTTCCCTTTGTTGATAGTTATGACTTTCTAGTGTTTTTAATTAATTTGTCTTACCCATTTTTATTTTGTTGG CACTGAAAGATATGGCTATTGGTGGGAGAAGAAGGTTCTCCTTTTCTGCTCTTCTTGATCATCATCTTCTCCTTCCAACT TTGTTAATCACCATACTTTTTCAAAGGGCTGTGGCTGATCATGAATCCAATATCTTAAATTACACAAGGCATCGCCAAGT CAGTGGAATGAGACTTGAAAGGATTAGCAGGTACTTGGAGAAGATTAACAAGGCTCCTGTTCTCACCATAGAGGTAATAA CATTAATACAAAAAAACTATATAGTTTGTGATTTTTGTTTTGTACGAAGAAGGAAAAAATAAAGAGAAGTAATACATATA ACATATGATATGATATGATAGGATATGATGTTACTTAAAGAAATATATTTAGAGAAAAATAGATTGTAATGATCACACGT TAATGTCATTCTTCCTTTTTTTTGTTTTCTTTTATGATATTTTTCTTTCTTCTCTATTGCAAAAGTATTAACTATTCTCA TTTTTTTCCTTCTTTTGAATCATATTCTAGAGTCCAGATGGGGATCTCATAGATTGTGTTCACAAAAGAAAACAACTAGC TTTCGATCACCCTCTCTTAAAGAATCATAAGATTCAGGTAAAACCAACTACCTCATTAATTTCTTCACTCTACTTTACTC ATTTACTTTATTTATTCTGCTTGTGTAATTTAAATGTGGTATGGACCAATTTGATTATATTTGAAGTTTTGAATGATTTG ATTGATGCAACAGAAAGCGCCAACGGAGATGCCAAGAGGGATGAATGTGACAAGAGATGAAAATAGAAACATGGAAGGGG AAGGAGGAAAAGAGAATAGGCCAAAAGAGGCTGTATGGCAAATGTGGCACCGAAATGGAACTTGGTGTCCAAAAGGGACG GTTCCCATACGGCGGAGCACAGTGGATGATGTGTTGAGAGCAAAGTCTTTGTATGAGTTTGGCAAGAAACCGCCAGGAAT GCTTCCTCTCTCTCGCCGTACTGCCAATGTCTCCCCTAATGATATATTCAGCAACAATGATCATGAGGTACATGTTCTCT TTAAATAATGTCGCATATTCGATGTGAGTAGAAAGAACTTATCTCACAAGAGCGGTGAATATTTCAGCTTGCACATGATT GTTTGGGGTGCCAGAATGTTATTGCTACATTAATACAACTAATTGAATACTATTATACCAATTAGCTAATTAATAATCAT TTTTGCCACTTGATGAATAAGGAAAATTGGCCATAAGATGAATTTTTTTTTCATCACTCAGTAGCTGTATACAGAGACAC GGTATCCTTTAAAAAATCAATTATTTTAGAGATAGAATGCTATTTAACATTGCTTTCTTTGCACTTCAACAGTTCAACTC ACACTAATAAATGGAGATTGTGCATTAATTATTAGTTAATTAATTAAAGTGGTCGTGTGTGGTGCATATAAACGCAGCAT GCAGTCGCTTACACAGGATTGGGATCGGATTCGCCACAAGAGATTTACGGAGCAAAAGCATCAATAAACGTGTGGGAGCC ATCTATTCAAGTGATGAACGAGTTCAGCCTCTCACAAATTTGGCTCCTTTCAGGTTTCTTCGATGGTTCTGATCTCAACA GTATCGAAGCTGGGTGGCAGGTACACTCCTTCTAACTTCTAAGTTCTAACTCATTTTATTAATGAATGGATTCAATTAGA AAAAAAATGAGAGAAATTTAGGTGGTGGAGAGTTCGATTTTAAAATAGAAAAAACTCATTAGTCAGCTTCCTAGGGTTAG TATGCTAACAATGATTTGAGTTTCATAGCTATTGGCCAGGAGATCCTTTGGTTAACAATGAAGAAAGATACAAAATTCAT TAATGCATGATGGTGGTTTTAATGAATCTTTATTCACATCAAAACTCTTTTTCTTTATTATGATCACTCATTTTCAGTTG TTTCCTTGAAGCAACAGCATGCAGCCATGCACATTAGTAATATATTGTATATTTGTATTTAATGTTTAATTTATATAGAT AGAAATACTAATTAATTTAATGAAAAAAAGTGCATGTCTGAACCTTTGATTATTCTACTAGTCAGGTCAGTCCACAGATC TATGGTGACAGCAGACCCAGATTGTTCACTTATTGGACGGTCAGTATTTCTATTCCTTCTTCTCATTTCTCTTACTCTTC ATTCTCTTTCCCTTTTCTTGGGAAATAATAAATGGCAATTATGTATAAGACTGTAAGAGAAAGGGCATTTAAATTCTAGC TATTCAGCTGCAAACATGTGGTGTTTTTAAATGTGTAAAGGTTTTTGGTGATTGATTGCAGAGTGACTCATATGGGAAAA CTGGATGTTACAACCTTCTCTGTTCTGGTTTTGTTCAAATCGATAGCAGGATAGCCATTGGAACTGCAATTTCTCCTCTC TCTTCTTATGCTGGCAACCAATATGAAGTCACCATCCTCATTTGGAAGGTTAATTTCTTCCACACACAAATCTATCAATG TGCTTGAAAACACTTCATAGCATTGATTTTATAACATATTAGAGCTATTATAAATAACATATATTAGATATTACATTTTA TAATAAGTAATAATATGGTTTATGAATAAACCAATTTTTAACATGTGTGACTGGTGACACTTTGAATTAGGATCCAAATG TGGGAAATTGGTGGTTGAGTTATGGTGACAACATATTGGTGGGGTATTGGCCCGCGGAGCTGTTCACGCACCTAGCAGAC CACGCCACGGGGGTGGAGTGGGGCGGCGAGGTAGTGAACACACGGGCCAATGATGAACACACGTCCACCCAGATGGGCTC CGGCCACTTTGCCGAGGATGGTTACGGAAAAGCAAGCTACTTCCGGAACATTGAGATTGTGGACGTGACTAACACTCTTA GATCAGTGCAGAACATCACAACAATAGCAGAAACCTCGAACTGTTACAACATTCAGACCTCCTACAGCAAGGAATGGGGC ACGTATTTCTACTATGGTGGACCTGGGAAAAATCCACAGTGTCCGTGACTATTAAATTAGCTAGTTGCCGTATATATCCA TTATCATGGACACAAGAAGTTTTCACTTCCAGTTACTCGTTACTTATACGTAATAACGTAAATGACATAGAATTACTTTG TGCTGTTTCCATTCCTGTTTCTGCCACTTGCTTTTGTTTTTAGTTATGAAGATATATATGAATAATGAATGTAAAAACAC GATTGGAAATGGCAAATTTTGAA
CDS sequence (LotjaGi5g1v0205500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGAAGCTTCAAAAGGATATGGCTATTGGTGGGAGAAGAAGGTTCTCCTTTTCTGCTCTTCTTGATCATCATCTTCT CCTTCCAACTTTGTTAATCACCATACTTTTTCAAAGGGCTGTGGCTGATCATGAATCCAATATCTTAAATTACACAAGGC ATCGCCAAGTCAGTGGAATGAGACTTGAAAGGATTAGCAGGTACTTGGAGAAGATTAACAAGGCTCCTGTTCTCACCATA GAGAGTCCAGATGGGGATCTCATAGATTGTGTTCACAAAAGAAAACAACTAGCTTTCGATCACCCTCTCTTAAAGAATCA TAAGATTCAGAAAGCGCCAACGGAGATGCCAAGAGGGATGAATGTGACAAGAGATGAAAATAGAAACATGGAAGGGGAAG GAGGAAAAGAGAATAGGCCAAAAGAGGCTGTATGGCAAATGTGGCACCGAAATGGAACTTGGTGTCCAAAAGGGACGGTT CCCATACGGCGGAGCACAGTGGATGATGTGTTGAGAGCAAAGTCTTTGTATGAGTTTGGCAAGAAACCGCCAGGAATGCT TCCTCTCTCTCGCCGTACTGCCAATGTCTCCCCTAATGATATATTCAGCAACAATGATCATGAGCATGCAGTCGCTTACA CAGGATTGGGATCGGATTCGCCACAAGAGATTTACGGAGCAAAAGCATCAATAAACGTGTGGGAGCCATCTATTCAAGTG ATGAACGAGTTCAGCCTCTCACAAATTTGGCTCCTTTCAGGTTTCTTCGATGGTTCTGATCTCAACAGTATCGAAGCTGG GTGGCAGGTCAGTCCACAGATCTATGGTGACAGCAGACCCAGATTGTTCACTTATTGGACGAGTGACTCATATGGGAAAA CTGGATGTTACAACCTTCTCTGTTCTGGTTTTGTTCAAATCGATAGCAGGATAGCCATTGGAACTGCAATTTCTCCTCTC TCTTCTTATGCTGGCAACCAATATGAAGTCACCATCCTCATTTGGAAGGATCCAAATGTGGGAAATTGGTGGTTGAGTTA TGGTGACAACATATTGGTGGGGTATTGGCCCGCGGAGCTGTTCACGCACCTAGCAGACCACGCCACGGGGGTGGAGTGGG GCGGCGAGGTAGTGAACACACGGGCCAATGATGAACACACGTCCACCCAGATGGGCTCCGGCCACTTTGCCGAGGATGGT TACGGAAAAGCAAGCTACTTCCGGAACATTGAGATTGTGGACGTGACTAACACTCTTAGATCAGTGCAGAACATCACAAC AATAGCAGAAACCTCGAACTGTTACAACATTCAGACCTCCTACAGCAAGGAATGGGGCACGTATTTCTACTATGGTGGAC CTGGGAAAAATCCACAGTGTCCGTGA
Protein sequence (LotjaGi5g1v0205500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKLQKDMAIGGRRRFSFSALLDHHLLLPTLLITILFQRAVADHESNILNYTRHRQVSGMRLERISRYLEKINKAPVLTI ESPDGDLIDCVHKRKQLAFDHPLLKNHKIQKAPTEMPRGMNVTRDENRNMEGEGGKENRPKEAVWQMWHRNGTWCPKGTV PIRRSTVDDVLRAKSLYEFGKKPPGMLPLSRRTANVSPNDIFSNNDHEHAVAYTGLGSDSPQEIYGAKASINVWEPSIQV MNEFSLSQIWLLSGFFDGSDLNSIEAGWQVSPQIYGDSRPRLFTYWTSDSYGKTGCYNLLCSGFVQIDSRIAIGTAISPL SSYAGNQYEVTILIWKDPNVGNWWLSYGDNILVGYWPAELFTHLADHATGVEWGGEVVNTRANDEHTSTQMGSGHFAEDG YGKASYFRNIEIVDVTNTLRSVQNITTIAETSNCYNIQTSYSKEWGTYFYYGGPGKNPQCP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 42 | 42 | - | – | |
| SignalP_EUK | 1 | 42 | 42 | - | – | |
| PANTHER | 24 | 461 | 438 | 3.2E-226 | – | |
| PANTHER | 24 | 461 | 438 | 3.2E-226 | – | |
| Phobius | 26 | 37 | 12 | - | – | |
| Phobius | 38 | 42 | 5 | - | – | |
| Phobius | 43 | 461 | 419 | - | – | |
| Pfam | 79 | 213 | 135 | 8.7E-43 | ||
| MobiDBLite | 118 | 139 | 22 | - | – | |
| MobiDBLite | 121 | 139 | 19 | - | – | |
| Pfam | 231 | 454 | 224 | 2.3E-89 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0205500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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