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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0205800 |
| Transcript ID | LotjaGi5g1v0205800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LOW protein: ammonium transporter 1-like protein; TAIR: AT5G37360.1 LOW protein: ammonium transporter 1-like protein; Swiss-Prot: sp|Q708W1|FXJ1B_XENLA Forkhead box protein J1-B; TrEMBL-Plants: tr|A0A151U5G1|A0A151U5G1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0205800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50801704..50806658) extracted from Lotus japonicus Gifu genome v1.2.
CTCAACTATTTTATCAGTAATGAAAGTCATCCCATAAATTATTCTTTACTTATGATATTCGTTAAATAAAGGCATATTTC TCAGATAATGTTTATCTTAATAAGAATAACACATTATCTAGCCATGGATAATAATAATCACATGCAAACTTGTCATTTAT ATGCCGGAATTTTAGTGGCTGACACCGAGTGTTGCATAGCTCCAATTCAACAATGGCTTCAGCTTCGCTTCATCTCCTTC CATCTCTCTCCAGACTCTGTTATTCAATAGCCCCTCTTTCCCATCATCACACTCACCAATTCTCTTCCATAACCTCACTC AGATTCTCCACGTTCTCTTCTTCTAGCAGTACCATTTCTCTCCCCAAACCTCTCACTGTGTGTTTCGCTCTCACAGAGCC CAATTCACCCAAATCCCTAGACCCTGATCCTCAATCTCTTCTACAAGAAATTGCTGTAAGCCATTCAATTCTCATGCTTC AAATTCCTGTATTTCATATTTCGTAATTCATGAGTTCATGTGCGTTTGTTCACTTTGCAGGACAGTTTTGATCTTCCTTC TGATTACTTTTCACAGTTTCCCAGTGATCTTCGATTAGACGTAAGTGCAGTACCATCCTCTGTTATGTAATTAACACACA GCAATGACATCATTTTCATGTAATCGTTTCCATTATTGATAGATAGCAATTTAAAAAAAAAAATAAAAAATTGATCCTTT GCTTTTGAAATGTGTTTGTGATTTGTGAAGTTAAATGACGCGGCGTTCGACCTTTCCAATGGACCTGTCTTGGATGAGGT TGGTACTTTTTGCTACCTACAATGCAATCACAATTCAAGTTTCAATTAAGATTCAATGTTAGTATAATGATTCTCCCTCT AAGCTTTCCTTTAAAACAGTCCCTGCTCAAGTGGTTTCATGTCATAGCTTTTCTTCATTTACAATCAATCAATTATTTTG GATTGAATTGATTTTGAAAAAAATGATTATAGTAAACATGAGTTGAATGTGAAGTGATTTATGTTTGGCAACATTTATGA ATATTGTTTTTGTAGGGTAATTTTGTGAAATTCAGTTGTAAAATCTCAGAATTGATTATGTTCAATGCAGAAGCTACTCT CTATAGCTTCTAGCAGAATTGATTCTGGGACTGAAATCGATTCTCCAAAATGACTCTGAAGCATCTATATTGTCTTGCGA GCACACACTTACATGCATTTAACTTAAGTGTTAATTTTCCTCCTAAAGATGTTTCTACTATATTATGTGTACTTGGTGTG TTTTCAATTCCAAAATAGAATGGATATGTTTTGTTTAATGGGAACAAGTATACTTTCTCAGTGTGGCCAAGAGCTGGGAC AGACATTGCTAAACCTCTCTCGAGCGTGGGAACTTGCCGATACATCAACCTCTCACTCATTAGTGGCGAAGCTTCCTTTG TTGGAGGCTAATTTGACAGGCACTGCCAAATCAGGTAAACCCATGAGCAAGGTATCAGTGAGCTTTTACTACTGGGACAT TCCTTTTTTATGGATTTGGCTTTAAAATATTTGTTCTCTTTGCTTCTTAGCCCTTGGCAAGCGTTTGGTATCTGCTGGAA GAAGATTTCAATCAATGGGGCAGTATGGCCAAGGTGAGCCACAAAAGGTAACCCCTACTAGACATATAACCCCCACTAGA TACACATAACCCCTACTAGACATATAACTCCTACTGGACATATAACTCCTACTAGGTAGATAACCCCTACTTGATGGACA TAACCCCTACTATGCATATAACCCCCTACTAGATATATAATCCCTACTAGACATATAACCCCTACTGGATATATAACCCC TACTAGATACACATAACCCCTACTACACATATAGCCCCTACTTGATACACATAACTCCTACTATATTCTCCCACCTCTTT GAGAGAATACTTGTAGCAAAAGCATCCTCAGTAGGAAGAAATGAGAGAATATGACAGAATTTTATCAGGCAAATTACTTA TCCTATCACTCATTCTCAAACTAAAACTAAAGGGGAATGAAAGAATATTGGAAAAGGGAAATGAAGGAATATTGGAAACT GGACTGAAATGGATATGGAAATCAGAATGAGAGAATTCAGTACTACTCTCACGCTATCAAAATGAGAGAATTATGTACTT CTCACGCTCCCATCTATACTACAGGTGACTCTCCAATGATTTTTTTTACGATTGCAATGACTCTTAAATGAATAGCATTT CAGGTGACTCTCCAATAACTTTATGGATAATCGTAACTCTTCCTAGATCATTGTGACTTTTCCTACAACTATCAAAAATG AAAATAAATGGTGAGTGTAAATTCATTTATTTTATTTCACTCACCATTTAATTTCATTTTTGATAGTTGTAGAAAAAGTC ACAATGATCTAGGAAGAGTTACGATTATCCAAGAAGTTATTGGAGAGTCACCTGAAATGCAATTCATTTAAGAATCATTG TAACCGTAGAAAAAAAGAGTCATTGGAGAGTCACCTGTAGTATAAATGGGAGCGTGAGTAGTACAAAATTCTCTCATTTT GATAGCGTAAGAGTAGTACATAATTCTCTTATTCTGATATTCATTTCCATCTGAGTCCAGTGTCCAATATTCCTTCATTT CCCTTTTCCAATATTCTCTCATTCCCCTTTAGTTTTAGTTTGAGAATGAGTGATAGGATAAGTAATTTGCCTGATGAAAA TCACTACTCAATGTGTGTTGGTGGTTCTCCCTGGCTTCCATGAAATTGATGTAATGAGAAAATGATTGGGATTTTTGGGG AAATCACTAACTAGTTGATGTAATGAGAATAAGGGCTCAGCTCGCTTTTTTTTTGTGTGTTAATGATTTAATTGATCTTC TGGTTTGTTACTGTTTGGGGTCATTTTCCCTCTATATGATGTAAGTTTAATTATTTTAAAAACTAGTTTCTCTCTTAGAA AACATATATCATAATGTAACAAATTCAGGATATCAAAAGGACCTAAAGAGGAAACTAGAGAATGATCGAAGTATTTCTAT ATGTATATATTCACTTCTTTGTTATTATCTTTATTTCATAGCTGAAAGTGTCATTACTTTGTTTCAGAACATTAGCAGAA ATTTATACATGGAATTGGTTAGTGGTTTTCATAATGCACCCACAGGAATATTAGGTTAGGGGTTACTACCTAACCACTTC AGCCCATTCTGTGATAATTGAAGCTGGTGTAACTGTAAACATGTTCGTATTATTTGATTGATGCATCAACTATGTATAGA GGCATATGTTTTGTTGCAGGACCATAAATTTCAAAGATAACATGCTTCTGCAACGATTAATTACTAATACTGGAAATAAA CTTTTTGAATATTTGTCAGCAAGTTCAAGTCAATTTTCTTTTTCTTTTAAACACTGATCATTGCTAGGTATCAGAAAGAC ACACCAGGATATTAATCCAATTAGGTAACCTCTATGCACAAAATAATATAGAAAAACACACCAGAGTCAATGTTACCATA TTTGACATAGTGATTTTATCTAAGTAACACTTATATGTCTCTGTGTTTAACCATCAAGATTGCAAAAGCAATGATTGCAG CTGGGAGAGTTCTATCTGCCAGTTCAACATCTGCAGTAATAGATGAACAACCCAAAGAGGAAACCAGAATGCTGAAGGTC AATAATGAATAATTAGTCTCTGCTTATGGGAAAAATTCTGTTATAAGAAACTATTGCTATAAACTACAAAATTACTAACG TGATTGCCATCTGCAGTTTGGAGATTTGCAGGTTGAAGTAACACTGGAAAAAGCCATTATTGGGGCTGTAATTGGAACTA TTTTTGGGTAAGTTTTCCAAGTTAGACTTGACTTGAATAAGAAAGGAGGCTGGGAAAACTTAGTTCTTTTTTTAAACTTT GAACGCAGGGTTCTTTCATGGGAAATAGCTCAAGGAATTCAAAGCGTTCCTGAGAGTTCTTCGCAGTATGCAAATGACAG TGCCTTTGCACTTGCTAAGGTGCTTTGAAATAGCTTCCCTCTCACAACACTTCAACTTGTTTCTGTTGACTACTAATTTC TGATGCCAAAAGTGTCTTAAATCTAAATGCTTTGCTGCAGTCTTTAAGGGGAGCATTGATTTCCCTTTTCTACGCCTCCA CGCTCTTGTCTGCATCTACATCGGTGGGACTTGTTCTACTTGCAATACAACTCAAATCAAAGAAAAATTAAGCTTTCTGT GCTTTCTCTCCTAAATTTTCGTTGTAAATGGTGTAGTAGAGAAACACTGTCTAAGTTTGTGAATATACATTCACAGTGAA GTACTAAACTCATCACATCGTTGGAGAGCAATCTCAATGTAGCAATATTTTTGTTTAATGTAACCCTACATGATATGAGA GGATGCCTTATAGGTAACTGTTTTATTTACTGTCCAGAACTGCTTCTCTGTCATCTAAAGTACTTCATTCAGATCGAACA AAACCATCCGGAATAAAAGAGATAGGAATAGAAGAGGGCGGAGTGAGAGAGGAATAGGAGAGACCAAAGTGAGAGATATG AGTTGACATCATAGAAAAAAATTAATGAGATATGAAGAAAAAAATTAGAAAAAATAAGTAGAAATGAGATGAAAGAAAAA GTGAGTGTGAATATATAATACTTGATTAAGATAACAGCAAAATAATAATAACAAAATAATAATAAGTCTACGCGGATGTA ATTTTCGAATCTTATATGTTGCTATATATGTTGTAAATAAGTTGGCATATTTGAATCAACTTCTCTTTTGTAAGAATCAA TTTTGGCACATAGAAGCTATTCACATAAACTTCTTCCAGGATTGATCTTGACTTAAGAATAAGTTGTAGAATAATTTTCA AAAGTGCATTAGGGCCGCGGTTGCAAGAGCTTATTTGAGCTGATCTTATAGCATAAACTTAAGCAAGTATTTGAG
CDS sequence (LotjaGi5g1v0205800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAGCTTCGCTTCATCTCCTTCCATCTCTCTCCAGACTCTGTTATTCAATAGCCCCTCTTTCCCATCATCACAC TCACCAATTCTCTTCCATAACCTCACTCAGATTCTCCACGTTCTCTTCTTCTAGCAGTACCATTTCTCTCCCCAAACCTC TCACTGTGTGTTTCGCTCTCACAGAGCCCAATTCACCCAAATCCCTAGACCCTGATCCTCAATCTCTTCTACAAGAAATT GCTGACAGTTTTGATCTTCCTTCTGATTACTTTTCACAGTTTCCCAGTGATCTTCGATTAGACTTAAATGACGCGGCGTT CGACCTTTCCAATGGACCTGTCTTGGATGAGTGTGGCCAAGAGCTGGGACAGACATTGCTAAACCTCTCTCGAGCGTGGG AACTTGCCGATACATCAACCTCTCACTCATTAGTGGCGAAGCTTCCTTTGTTGGAGGCTAATTTGACAGGCACTGCCAAA TCAGCCCTTGGCAAGCGTTTGGTATCTGCTGGAAGAAGATTTCAATCAATGGGGCAGTATGGCCAAGGTGAGCCACAAAA GATTGCAAAAGCAATGATTGCAGCTGGGAGAGTTCTATCTGCCAGTTCAACATCTGCAGTAATAGATGAACAACCCAAAG AGGAAACCAGAATGCTGAAGTTTGGAGATTTGCAGGTTGAAGTAACACTGGAAAAAGCCATTATTGGGGCTGTAATTGGA ACTATTTTTGGGGTTCTTTCATGGGAAATAGCTCAAGGAATTCAAAGCGTTCCTGAGAGTTCTTCGCAGTATGCAAATGA CAGTGCCTTTGCACTTGCTAAGTCTTTAAGGGGAGCATTGATTTCCCTTTTCTACGCCTCCACGCTCTTGTCTGCATCTA CATCGGTGGGACTTGTTCTACTTGCAATACAACTCAAATCAAAGAAAAATTAA
Protein sequence (LotjaGi5g1v0205800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASASLHLLPSLSRLCYSIAPLSHHHTHQFSSITSLRFSTFSSSSSTISLPKPLTVCFALTEPNSPKSLDPDPQSLLQEI ADSFDLPSDYFSQFPSDLRLDLNDAAFDLSNGPVLDECGQELGQTLLNLSRAWELADTSTSHSLVAKLPLLEANLTGTAK SALGKRLVSAGRRFQSMGQYGQGEPQKIAKAMIAAGRVLSASSTSAVIDEQPKEETRMLKFGDLQVEVTLEKAIIGAVIG TIFGVLSWEIAQGIQSVPESSSQYANDSAFALAKSLRGALISLFYASTLLSASTSVGLVLLAIQLKSKKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| PANTHER | 10 | 309 | 300 | 9.1E-144 | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 282 | 264 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Phobius | 283 | 303 | 21 | - | – | |
| Phobius | 304 | 310 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0205800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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