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LotjaGi5g1v0210500.3

Overview

Field Value
Gene ID LotjaGi5g1v0210500
Transcript ID LotjaGi5g1v0210500.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Heme oxygenase-like, multi-helical protein; TAIR: AT5G32470.1 heme oxygenase-like, multi-helical; Swiss-Prot: sp|F4KFT7|TENAC_ARATH Bifunctional TH2 protein, mitochondrial; TrEMBL-Plants: tr|K7N529|K7N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0210500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:51453230..51457895) extracted from Lotus japonicus Gifu genome v1.2.

AGCCCATACCCACCAAAGCCAGCCATCACTTCGAACTCGTCTCTTTCATGCTCTTTCTCTCTCTCTCTCTCTCTCTCTCT CTCGGTGTAAAACACGAGACGAGACGAGACACCGAGGGGTCATCGCCGTCTGCGTTAGTTCATTCTTGATGCGCATGCGG TGTTTCCTCCGAACTCCAATCTTCAAAACCCTCGTAACCGTCAACTCTTCAATCTCATTCCTCCCTCCTCCTCACTCGCC AGTAACCGCCAATCTCCGATTCCCAATGGCGGCGGCGGCGGCAATCCACACCGAAGCAGGTCTCGCTCGCCGTTTCTGGA TCAAGTTCGCTCGCGAGTCCATCTTCGCCATGTACACTCCCTTCGCCATCTCCTTGGCCTCCGGTAACTTGAAGATTGAC TCCTTCCGCCACTACATCGCTCAGGATGTTCATTTCCTCCGCGCTTTTGCTCGAGCGTCAGTTCTTTACCACCTTCATTC TTTCTTTGTACTCTTGAAATTGTTGTTTTCCCCTGTTTGGTTGCTGAGAAAGTTTGCATCATGAAAATGAGTATAGTAAT GATTGATAAAAGATGAAATAGTCAACAAATGAAGTTAGATTTTGATTCTTGAACTCTGTAGCTTGATTTAGATTACAAAG TTTGATAGAACTATATGGACATTTTTAGAATGTTTATTGTCTTATATTAGATGGTGGAGAATGAAATGTTCTCTTGGCTC AACATTGTGTGGTTTATGGTTCTTGGAACTGAGTGAAACTAAATTCATATGTTTGAATTTTTTACTGGAGAGTTAGATTA TTTGGTGAAATTGTTTCTGGCTTGTTGTTGTTGTTGATTTTTTAATTATTAAAAGGTTATGTTAGATTGTTTGGTAGTTT AAGTTTCATCTTTGAATTTTGATGATTTAATAGGTATGAGTTGGCTGAAGAGTGTACTGATGATGATGATGCAAAGCTTG AATTCTCTGAGTTGAGAAAGGCAGTTTCAGAGGAGATGAAGATGCATCAGTCATTGGTACAGGCAAGTCATTTTTCCCAC ATGGGATTGAATTGAAACTGAATTTTGCATCTTATTCATTATGAATTTATAATTCAACTACTTAGGTTTCTGAATCATGT CTTGAATTATGAAGTATTTTTCTCCATGGATCCCATTGCTATGATTTTCATCTTGTGTATATGGCATAGCTCCCAAAACT ATTTCAGCTGTTGTTTGCTTATAGTAAAGGACCCTTGAATCTCTAACTCTGTGCAATGCATTGCATAGCCAGTTCCGAGC CTGGAGAAAAGAGTCGGGTTGAGTTAGGTAGTCGACAGATAACGTAATATTTTCTTGAATATACTTAACATGGATCATTT TCAGGATTATGACATTATCTGATCCATGTAACCGATGTCAGCTAGTAGGAAAAAGATTGGTTGTTGCTGCTCTTTTCGTC GTTCGCTAATAGTAAAGTAGGCATTGTCCACTAAATACAGATTGGACCCCTTTTCAATGTTTGAAAAACATACACAACTC GCATGCTAATAATGAAGTTCATGTGGTTGAAGCATGACCATAAGGGAAATCCATTGGATTCCTGTAGAACAAGGGAATGA GTGGTTATAAATTACTTCTAGGGAGGAAAAAATGTGTTTTGCCCAAATTCCACCTTGGTGTATTATTATTGTTGTTGTTG ATCATGATGATTCTGTTTGAGATTAAGCCCATCTTTAAACTTGAAATATATGAATGTATGTCTCATGTAATGCAAACTTC AGGAAAATTTCAAAAGCCAAATTATACTTTACATGCTTGTAGTTCTTTCCTTTTCCTTTTTCAACCTTATAGCCGATAGT ATTGTGGTTTTTATGCTAATGGTGTGCAGGAATGGGGGTTGGACCTTGCCAAAGAGCATAGCATTAATTCCGCAACAGTT AAGTACACAGACTTCCTGTTGGCTACAGCCTCTGGAAAGATTGAAGGACTAAAAGGTCCTGGTAAATTGGCCACCCCATT TGAGAAAACAAAAATTGCTGCTTATACTTTAGGTGCTGTGACACCTTGCATGAGGCTTTATGCCTTTTTGGGTAAGAAGT TCAAGGAACTTCTGGACTCCAATGAAAGTGCCCATCCGTACAAGAAGTGGATCGACAACTATTCCTCTGATGGTTTCCAG GTTTGTCACGTTGAAAATAGAGGCATACCATATAGCCCTTGTGGTTGCTTGTATACTATTTTGAATGGTTGTCGAATATA CATTTACTCATGGCATTCTTGTCCCCAACTACTCAGTTATTCTTCTATTTGAATTTAGGCTTCTGCTCTGCAAACTGAAG ATTTGCTCGACAAAATAAGTGTCTATTTGACTGGCGAAGAACTTGATGTCATTGAAAAGCTTTATTACCAAGCAATGAAG CTTGAAATAGACTTCTTCTCTGCTCAACAACTTTCTCAGCCAACTATTGTACCATTGACTAAAGGCCATAACCCAGCAGA AGATCATCTCATGATTTTTTCTGATTTTGATTTAACATGCACTGTTGTCGATTCATCTGCCATTTTGGCAGAAATTGCTA TAGTGACAGCACCAAAATCTGATCAGAATCAGCCTGAAGATCAAATTGTTCGAATGACATCTTCTGATCTCAGGAATACA TGGAGTTCTCTATCCAAACAGTATACAGAGGAGTACGAGCAATGCATAGAAAACATTATGCCTGCCAAAAGATGTATGCT GATTTTCTAAATTCTATCTACAATTAAATGCTTTAGGAGGAATCTGTGTTTTGCTCAGACTTTGTTAATTGGCTTTGACC TTATGTGATTTGCAGTGGACCATTTTGATTATAAAGAACTGTCTATAGCACTGGAGCAACTCTCAAAATTTGAGAATACA GCAAATAATAGGGTTATTGAGTCAGGGGTTCTCAAGGGTATAAATCTAGAAGATATAAAGCGTGCTGGAGAGCGTTTGAA CCTTCAAGATGGTTGCACTAACTTCTTTCAGAGGATTGTTAAGAATGAAAATTTGAATGCCAATGTGCATGTTCTTTCAT ACTGCTGGTGCAGTGACCTCATTAAATCTGCTTTCTCTTCAGGTACATATTCTTTATCTTGAGCTGTAATTTCATTTCTC TTTGCTGATACTTGTATTCTAAATGTTTATTTTCAAGAACTTGAGCTCATGGAAATTTAAGTCCTTTTTCCTTAGGACAC TACTATGAGTCAGTTATTGTGTTCATTTTGTGCTCTAGGAGTCATTGTAGTCATGCTGCAATAATGATATATACACACCT CATTTTTTAAACACTCTATTTCCACCTCTTTTTATTTCTATCTCTCTCTCCTCTTATCATCTATCATATTTCATACTTTC TCTTTCTTACTTTTTCTTTTCTTTCTATCTCTCTCCTCCTTCCACCTCTCTCCACCTCAAAGAGAGGTGTGAAGATAACA TTATTCAGTCATGCTGTGTCTCATAAACTTGTTTGAATTGCTGGTAAACGTGTCTCCTTGCACCTCCGAGCATTTCCTTA TAATGTTTTTAAAGTTCTTTCAGGAGTAAGGTATTAAGAGGTCTATACAATTTTCTGATGTATTTTATTGGAGAATGTGC CTGTGTTTCATAGTTATTTTTTCTCCTTACATTTGCTAGTGGATAGAATTTGGAAGGCCTCTCATCTATGCTATCCATGG TTGTTTAAGGGAATTTTTATTGTTGCAATGCATCGAAATCAGAAAGCTTTGCTAGAATTTTGAGCCACTTTAGTTTTGAT GCTTTCTTTACACCTTAGTTTTATATATGTATTTTTTTATTTCATAAATTTAACTGACAATACAGATTCAGCTTTGTTAT ATAAACCAGAGACGTGTTATTATTTGTCAATTTTTATGTTTATGTATGTTTAACATGGCAAAGCTGGACTTTTGTGGCAG AATGGTTTGTCTGAATGAACTGAATCACCATGAGTTCTTAATTCCTGTTTTTCTTGATCTCTTTCTGTTATTTGCTTGGA GCCTATCCATGATTTTTTTGTGTTGAAATTTCCCGTGTAGTTTGCCTTGATCAGACCTTCTTTATTTTATGTACATTCAT AACTGTTGATGTCTTCCTTGGTTACTTCCTGGTGGTTTATCTTTAGTGCTTTTATTTTCCTGTTGATGTCTAGACTTTCT GCTGAGAATTCACCAAGTTGGTTGAAATTGGCAATTGATTATATTTCTGTTTCCTATTGTCTAATCATTTTTATTTTCTT AATTTTCAAGCAGCTGATTTAAATGAGTTGAATATTCATGCTAATGACTTCACGTATGAGGGATCTGTTTCGACGGGTGA CATTGTTAAGAAGGTGGAGTCTCCCATTGACAAGGTCCAACAATTTCGTAGTATATTGAAAAATTGCAACAATGACAAGA AGAAATTAACTGTTTACATTGGAGACTCATTGGGTGATCTACTTTGTCTACTCGAAGCAGATGTAGGAATTGTGATTGGT TCAAGTTCAAGCCTTAGGACTGTTGGGACGCAATTCGGTGTTTCATTTGTCCCATTGTTTTCTGGCTTGGTTAAGAAACA GAAAGATTACATTGAAGGAAGCTCTTCTAATTGGAAGGGTAAATCTGGCATTCTTTACACAGTCTCTAGTTGGGCTGAAG TGCATGCTTTTATTTTGGGTTGCTAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0210500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGCGGCGGCGGCAATCCACACCGAAGCAGGTCTCGCTCGCCGTTTCTGGATCAAGTTCGCTCGCGAGTCCATCTT CGCCATGTACACTCCCTTCGCCATCTCCTTGGCCTCCGGTAACTTGAAGATTGACTCCTTCCGCCACTACATCGCTCAGG ATGTTCATTTCCTCCGCGCTTTTGCTCGAGCGTATGAGTTGGCTGAAGAGTGTACTGATGATGATGATGCAAAGCTTGAA TTCTCTGAGTTGAGAAAGGCAGTTTCAGAGGAGATGAAGATGCATCAGTCATTGGTACAGGAATGGGGGTTGGACCTTGC CAAAGAGCATAGCATTAATTCCGCAACAGTTAAGTACACAGACTTCCTGTTGGCTACAGCCTCTGGAAAGATTGAAGGAC TAAAAGGTCCTGGTAAATTGGCCACCCCATTTGAGAAAACAAAAATTGCTGCTTATACTTTAGGTGCTGTGACACCTTGC ATGAGGCTTTATGCCTTTTTGGGTAAGAAGTTCAAGGAACTTCTGGACTCCAATGAAAGTGCCCATCCGTACAAGAAGTG GATCGACAACTATTCCTCTGATGGTTTCCAGGCTTCTGCTCTGCAAACTGAAGATTTGCTCGACAAAATAAGTGTCTATT TGACTGGCGAAGAACTTGATGTCATTGAAAAGCTTTATTACCAAGCAATGAAGCTTGAAATAGACTTCTTCTCTGCTCAA CAACTTTCTCAGCCAACTATTGTACCATTGACTAAAGGCCATAACCCAGCAGAAGATCATCTCATGATTTTTTCTGATTT TGATTTAACATGCACTGTTGTCGATTCATCTGCCATTTTGGCAGAAATTGCTATAGTGACAGCACCAAAATCTGATCAGA ATCAGCCTGAAGATCAAATTGTTCGAATGACATCTTCTGATCTCAGGAATACATGGAGTTCTCTATCCAAACAGTATACA GAGGAGTACGAGCAATGCATAGAAAACATTATGCCTGCCAAAAGATTGGACCATTTTGATTATAAAGAACTGTCTATAGC ACTGGAGCAACTCTCAAAATTTGAGAATACAGCAAATAATAGGGTTATTGAGTCAGGGGTTCTCAAGGGTATAAATCTAG AAGATATAAAGCGTGCTGGAGAGCGTTTGAACCTTCAAGATGGTTGCACTAACTTCTTTCAGAGGATTGTTAAGAATGAA AATTTGAATGCCAATGTGCATGTTCTTTCATACTGCTGGTGCAGTGACCTCATTAAATCTGCTTTCTCTTCAGCTGATTT AAATGAGTTGAATATTCATGCTAATGACTTCACGTATGAGGGATCTGTTTCGACGGGTGACATTGTTAAGAAGGTGGAGT CTCCCATTGACAAGGTCCAACAATTTCGTAGTATATTGAAAAATTGCAACAATGACAAGAAGAAATTAACTGTTTACATT GGAGACTCATTGGGTGATCTACTTTGTCTACTCGAAGCAGATGTAGGAATTGTGATTGGTTCAAGTTCAAGCCTTAGGAC TGTTGGGACGCAATTCGGTGTTTCATTTGTCCCATTGTTTTCTGGCTTGGTTAAGAAACAGAAAGATTACATTGAAGGAA GCTCTTCTAATTGGAAGGGTAAATCTGGCATTCTTTACACAGTCTCTAGTTGGGCTGAAGTGCATGCTTTTATTTTGGGT TGCTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0210500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAAAAIHTEAGLARRFWIKFARESIFAMYTPFAISLASGNLKIDSFRHYIAQDVHFLRAFARAYELAEECTDDDDAKLE FSELRKAVSEEMKMHQSLVQEWGLDLAKEHSINSATVKYTDFLLATASGKIEGLKGPGKLATPFEKTKIAAYTLGAVTPC MRLYAFLGKKFKELLDSNESAHPYKKWIDNYSSDGFQASALQTEDLLDKISVYLTGEELDVIEKLYYQAMKLEIDFFSAQ QLSQPTIVPLTKGHNPAEDHLMIFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMTSSDLRNTWSSLSKQYT EEYEQCIENIMPAKRLDHFDYKELSIALEQLSKFENTANNRVIESGVLKGINLEDIKRAGERLNLQDGCTNFFQRIVKNE NLNANVHVLSYCWCSDLIKSAFSSADLNELNIHANDFTYEGSVSTGDIVKKVESPIDKVQQFRSILKNCNNDKKKLTVYI GDSLGDLLCLLEADVGIVIGSSSSLRTVGTQFGVSFVPLFSGLVKKQKDYIEGSSSNWKGKSGILYTVSSWAEVHAFILG C
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.20.910.10
1 245 245 4.0E-59
IPR016084
PANTHER
PTHR43198
4 554 551 1.9E-266 –
PANTHER
PTHR43198:SF2
4 554 551 1.9E-266 –
SUPERFAMILY
SSF48613
30 238 209 1.4E-40
IPR016084
Pfam
PF03070
32 129 98 1.2E-13
IPR004305
Pfam
PF03070
152 239 88 8.2E-9
IPR004305
SUPERFAMILY
SSF56784
252 517 266 1.27E-19
IPR036412
Gene3D
G3DSA:3.40.50.1000
262 511 250 3.6E-11
IPR023214

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0210500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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