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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0212800 |
| Transcript ID | LotjaGi5g1v0212800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|O22768|UNE12_ARATH Transcription factor UNE12; TrEMBL-Plants: tr|C0JP10|C0JP10_LOTJA Putative basic helix-loop-helix protein BHLH2; Found in the gene: LotjaGi5g1v0212800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51791206..51796569) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGTCTCTATCTTTTTAAAGCCGTAGCGCACTCACTCACTCACCTTGTCTGTAGTGAGAACACACAAGAAGCAAAAGC TGTAAAGCTAGCTTCAACTGGCATGGGAAAAATATAAAGACCCACTCAACCCAACACCCATACAATTTTCTCTCTTCCTT CCTTGTTTTCTTTCTTTCTTTCTCACAAAACAAAACAAAACAAAACATTGTTGGGAAGTGCCCTCAAATTCCATTCCCGG GTCATCGTGTTTCGCACACCTTAACAACACCCTCCTTGTTTTCTGCTCTGTTTTCACCCTGCAAGCATATCAACAAATGT GGCAATATTAAAAGCTTGCTCTGTTCTCTTCTGCAGACTCACAAATACATGCACACAGCAAGTTAAACAGAGAAGAAAGT AGAAAATGGTGTCGGAGGGGTTAGGGGATGATTTCTTGGAGCAGATCTTGGCGGTGCCGGAGGCCTATGGCAGGACGGTG GTGGGCGACGGAGGAGTGTTGCAGCTGGGTTTGAGAGGAGGAGGAGGAGGAGGAATCCCTCTGGGATTGAATTTGGAACA ATCTGCGTTTCTCACACACCACCAAGATACACGCTTCATTGACAACAACAACAGCAACAACATTAATAGTAATAACCATC ACCACCAACATCACCAGCTTAGTCTCAATAATCATCATCATCACAGTGAAAACTATGCCACCTCTTCATCTTCCTCTTCA ATCACTGTATGCAACTTCAGACACATAACTTCTTTCTAGCTATATATATGTTTTGTTATGAATTGATACTGATTAATGGT ATTCTTGATTGCAGGATCGGGAATCGATGCAGATGAGGGGTTTGTTTCCAACGTTCGGACAATTGCATACTCCTACTCAT GCTCCCTCTGTCCGCCCCACTCTGCCACCGCCTTCTCAGCCCCAACTCCACCTCCACCACCAGCACCAACACCATCATCA GGTCCATATTACTAGTAGTCTAGTACTTGTTACACCCTAGCCTTGATGAGCCATGAGGATAAAATAAACTTCTAATCATT TTTTTAATTTTAATTTCTCATTTTTAAAATCCATTATTTTGGTAGAATTGATTACTATACACTAAAAAGTCTAAAATGGT TAGACATACTACTCTAATTAGAATTTATAAAATATTTAAAATATAAAATAGAATTAATAAGGTCTAGCACAACTGATAGA AAGTTGAGCTCCTTAAACATTTATTTTAGAGTTTAATTTATGGGCGGTATGTATGAAGAATGATTTATTAGAAGAGACTT ATCCTGTTAATGTCATCTCTAAAACTCGAGATGATTAGTCTTTCTACGGTGGAAATAAAATGTAGGTGTAAGACTTTGGG AACCCTATAAATTAAATTCTATTTTGATATCCTAATATGAAAATGACTAATATCATATTATGTATCTTGCTTTTCACTCA TCCATCCGTAATCCAGTGAACCTTAAACTATATAAAGGCAGATTACTTATCATAATCATATTAGTATTATAATTAAAGTT GGGTCCCTTTACAATGCATATAGTGGAGATAGATGCCTTTGGATGATTAATTAGTAGGCACTCATTGTGTTAATTTCACT CATTCACAAGGGCAACATTTTTGCATCCGCAGAATCATTTTTCTTTTTCCTAGCCCTTTCTTTTCATTCGAGTTTTAAAA ATTCCCAGATTCTGTTTTATATATGTTATTTGTTTCAAAATGCTGGATTTGTTCTAGACTTTTAGGAGCATATATCGTGC GACACATCTTTTTCCTTTGTCATTTTGCAATCAGCAGTGCATAAGTACTTAGTACTACTATTACTTTAGTAGGTAATCAA TGATATACCAAAATTTCACTATTTCCTTTCGGCCAACTCGCTTTCTTCTGTTGATTATACATTTTCTATAACATAAAGAA ATAAAGTAAGTATTCCACTTTGTGCCAATACCGCTTGAGACCTGCATTTATATATTTTAACAATCCGCTTTGATTTTTAT TTGACGCAGTCACTGCAGTTACTGCATATGAGCTATTGGATTAAGATCAAACGTTTCATATTTAAACTTGGTAAATAAGA TGTTAATATATGTTAAAAACATGATCCGTTCGATTAAGATTAGACGGCTTGCACTTGTGATTGTAGTGCAGTCAACGGCA GGAAATATATGTGGATGAGTAAGATCATCATTTTGGCTATTCAACAACCTTTTCCACTCAGCTGCTACTGCTAGTCTTTT CATTAGCATTTTGGCTATTCAACAAGCAGCAAGTAAAGTCCAACTCAATCAACATCATACCACATAAGAATTTTGTTACG CACATGTTTGGTCCAGTTCCTCATTTTCTCTTAGAGGGTCCAACCATATCCAGCATCTTCCTGCTCCACTTGTTGTTTGT TTTACTTTCTTAAATTATCCAAATAAATGAATACTAAATTACTAATGGTTTCAATTTTTATTAGTAAGTCAAATAAATAA ACACCAGCAAAGAGGAGTAGTATTAATTGTAAAATACCTCTTAGTGTAGTAAAACACCATCTTGTTATATTCATTACTTG ATGATCACATTGCAGCCCCTTCAAAACCAGCAACCAACTCCAGCTTCTAATGCTCATATGCAACATCCACCTGGCATCCG CCCTAGAGTGAGAGCAAGAAGAGGCCAAGCCACTGACCCTCACAGTATAGCTGAGCGGGTAAGCCACACACATTTTTTTC CACCTCTCTGCTCAAATGTACACAGTTTGTTGCATGGCTAATTTCCCTTGTTCACCACATTTATGACAAAATTACTAACA GGGTTTCTAACCAATTCATTTGTATTGCATGTAGTTACGTCGTGAAAGAATCGCTGAAAGAATGAGGGCATTGCAGGAAT TAGTCCCCAGCATCAACAAGGTTAGTTCTTTCACAATGCAATTATGATGTTAATAATACCTTTGGCTGGATTTGGTTGCC TATGTTCTTAGTTAACATACACTTCACATTTTCTGCAGACTTTTGAAATTATCATTTCTTCATGCTTCATATTCTTTTTA TCTATTAATTGCAAACAGACTTGTATTTATGCTTATTATTTTGTAACTGTGGTTATGTAGTCGGACAGAGCTGCGATGCT TGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTTAAGGTATGGAAGCTCTTATAATCTGCACAATCCAACA AGACTTTCTTTATTCTGTGGATATATATCTAAAATTTCTTCCTGTATAAAAGTTATGTTGAACTTGCATTTATGCATTTT GAAGTAATTAAGTCCTCAAGCACATATGAAACCACTTACTAAATCCATTATTTTGAAATCAAAAAATAATTTCAAATTAT TAAGCCTTCACAAATATTCTTTAGACTGTTGGTAAATGGAAGGCTTAACACTGTGGAATGTTTTGTCCACACTCATATAT TTGGACTATTAATTAGTGCTTAGTAGGCTCATTCCTGTATTGACATTGTCTCATCTATAACTTCTTATTGCAATGAGGTC TCAAATGAATATGAGATGTCTACTACATCTTTTTAATATCATTTTCTTTGTATCAATTATCTGAAGTCAATAGAATCTAT GTCATTAAATTTGATTGATGTATTCAAACAGGTGTTGAGCATGAGTAGACTGGGTGGAGCTGGTGCAGTTGCTCAACTTG TAGCTGATGTTCCCCTTTCAGCAGTGGAGGTGATAAATACAAATAGATGAAACTTTCTTTTTGTACTTGATATTCTTTTC ATCATATCTATCTCCCTTTTACTTTTATTTTTATCAAGCAATGAACTAGTTGTCCAAGTTTGGACCAAAATCCTTTATCC CCATCTGATGTCTCCTTCCTCCTTCCGTGTCCACCAATCAAATTATGACATGTTATTTAAAAATCACTCATGTAAGGTTG TAATTGTCTTACTCGTGTCTACATGACACAATATTATTGGTGGAATGGAGAAGGTAACACTGAATGAGGATAAATGTTTA TGTGCTTTTATTGTGACTACTTTGCTTGACATGTTGTAAAAGTATGTTTTGACATAAGTTTTCAACTGTTTGTTCTATTT AAACGCTTATAGTAACAGTGGACTTCATTGGTTTCATTGATTCTTTCAACAGGGGGAAGATATAGAAGGTGGAGCCAGTG AGCAAGCTTGGTCCAAGTGGTCCAACGATGGCACAGAACAACAAGTGGCTAAACTTATGGAAGAAGATGTTGGAGCAGCT ATGCAATTTCTTCAGTCCAAGGCACTCTGTATCATGCCAATATCACTAGCCTCAGCTATTTTTCGCATGCCACAATCAGA AGCATCAACAACAATCAAGCCTGAATCAGACAGCCAGACATAGAACAGAACAAAAATGTCACCTCAATTCTCCTCCTTTA TGACAAGGCTATTCTACTTTTTAGTATAGTTTCTCCTCGTTAGGATTCTCTCATGTCACATGATAATGTAAGTGAAATAT TATGCATATTCTCTCTTTATAAATACTCAGATGATCCCTTAAATATGAAGAGAGAGATAGACATAAAGTTTCAACATGAC AGTGTCGTGAAGTTTTCACATGAGAGGATCCTTATCCGGTTTCTCCTGATTGGATGGAGTAGGATCTAGTCGGTGCAGCT TTTAGTTTATTTTTCAAGTTTTGTCAACCAAGAAGTAATTGTCATTCATAATAAGTAAAGTAAACATGTCCTTATCAATG GTGAAAGATCATATATTTTCAACTATCCTATTAATGTTTTTCTCCCAAATATGTGTGGTAGGGTTGGTGGTGGATAGCCA AAATATTTGAAGTGGAGGCTCCTTTTCTTCATTTTTGATTTTAAAACTTCAGTGGAAAGTGGGACCATTTAAAAAAGGAA GGGTATAGATATGTATGATGTATCTGGAGGAAACTTTAGTGCAATTTGAACTAAAATATGGTTTGGTTAACCTTGTAATC TGTAAAGCTGTTTGGAACCATCTGAAAATTGGAAAAGCTAGTGTATTTTTTAATAATCATAGACGTTGAGTTTTGTTTGC TTATGAAGCAAGTGCATTCCACCACGAAATTTGGTGGGAGATTACTGAATCGTCTTCTTGCTGAGAAAGTGGAAAGTGAC ATTTTGTTAATTTACTGAACAAAAGTAAAGTAGCCCTTATCTTCTTACTAAATACTAATATTTATATAAAGGTTATGCTA ACTGATAGAATAGAAGAATCCCAATTCTATATTTAATGTATGAATTTGTTCTTTTGTCTATGTAATTTTTTGATATTGTG CTTAAATAGCGCGATTAGGACCCTGAATTTAGGCAAAGTATGTTCCTTAACTTTTCTTTTGAAATTTAGTCATTTGAATA AAAA
CDS sequence (LotjaGi5g1v0212800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTCGGAGGGGTTAGGGGATGATTTCTTGGAGCAGATCTTGGCGGTGCCGGAGGCCTATGGCAGGACGGTGGTGGG CGACGGAGGAGTGTTGCAGCTGGGTTTGAGAGGAGGAGGAGGAGGAGGAATCCCTCTGGGATTGAATTTGGAACAATCTG CGTTTCTCACACACCACCAAGATACACGCTTCATTGACAACAACAACAGCAACAACATTAATAGTAATAACCATCACCAC CAACATCACCAGCTTAGTCTCAATAATCATCATCATCACAGTGAAAACTATGCCACCTCTTCATCTTCCTCTTCAATCAC TGATCGGGAATCGATGCAGATGAGGGGTTTGTTTCCAACGTTCGGACAATTGCATACTCCTACTCATGCTCCCTCTGTCC GCCCCACTCTGCCACCGCCTTCTCAGCCCCAACTCCACCTCCACCACCAGCACCAACACCATCATCAGCCCCTTCAAAAC CAGCAACCAACTCCAGCTTCTAATGCTCATATGCAACATCCACCTGGCATCCGCCCTAGAGTGAGAGCAAGAAGAGGCCA AGCCACTGACCCTCACAGTATAGCTGAGCGGTTACGTCGTGAAAGAATCGCTGAAAGAATGAGGGCATTGCAGGAATTAG TCCCCAGCATCAACAAGTCGGACAGAGCTGCGATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTT AAGGTGTTGAGCATGAGTAGACTGGGTGGAGCTGGTGCAGTTGCTCAACTTGTAGCTGATGTTCCCCTTTCAGCAGTGGA GGGGGAAGATATAGAAGGTGGAGCCAGTGAGCAAGCTTGGTCCAAGTGGTCCAACGATGGCACAGAACAACAAGTGGCTA AACTTATGGAAGAAGATGTTGGAGCAGCTATGCAATTTCTTCAGTCCAAGGCACTCTGTATCATGCCAATATCACTAGCC TCAGCTATTTTTCGCATGCCACAATCAGAAGCATCAACAACAATCAAGCCTGAATCAGACAGCCAGACATAG
Protein sequence (LotjaGi5g1v0212800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSEGLGDDFLEQILAVPEAYGRTVVGDGGVLQLGLRGGGGGGIPLGLNLEQSAFLTHHQDTRFIDNNNSNNINSNNHHH QHHQLSLNNHHHHSENYATSSSSSSITDRESMQMRGLFPTFGQLHTPTHAPSVRPTLPPPSQPQLHLHHQHQHHHQPLQN QQPTPASNAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQV KVLSMSRLGGAGAVAQLVADVPLSAVEGEDIEGGASEQAWSKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLA SAIFRMPQSEASTTIKPESDSQT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 331 | 328 | 1.9E-116 | – | |
| PANTHER | 4 | 331 | 328 | 1.9E-116 | – | |
| MobiDBLite | 66 | 191 | 126 | - | – | |
| MobiDBLite | 66 | 82 | 17 | - | – | |
| MobiDBLite | 91 | 111 | 21 | - | – | |
| Gene3D | 180 | 237 | 58 | 1.7E-12 | ||
| CDD | 185 | 241 | 57 | 3.99069E-10 | ||
| SUPERFAMILY | 185 | 246 | 62 | 1.3E-14 | ||
| ProSiteProfiles | 187 | 236 | 50 | 15.713 | ||
| Pfam | 192 | 236 | 45 | 1.8E-6 | ||
| SMART | 193 | 242 | 50 | 1.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0212800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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