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LotjaGi5g1v0216300.4

Overview

Field Value
Gene ID LotjaGi5g1v0216300
Transcript ID LotjaGi5g1v0216300.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinesin, putative; TAIR: AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8W0Y9|KN14U_ARATH Kinesin-like protein KIN-14U; TrEMBL-Plants: tr|A0A0S3SQC4|A0A0S3SQC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0216300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:52208409..52213430) extracted from Lotus japonicus Gifu genome v1.2.

CTAGATGCTAAAATACTAACTCATATTCTAACATATTGGGTCACAAATGTAAAACTCAATCTTAAATCGTATATGAGCCG AAATACATGCTCTAAAAACCTAAGTTAAACAAGCCTAAACCTAAATTACTTAAAGTCCCATATAAAATCTCAAAAACAAA ACACGAAAGGTAATACCGAAATTAGGAAAAATACTAGCTATAAGAGCAAAGTTGAAAGTAAAGTCTTGGAAGAAGATTCT GACAAGCTCTCCATGAGGGATATCACCTAAGGTCCTCCCTCCATATGCAAAGATACATCACTTTCCCGGATCATCTACAT CCTTCTACAATTAAATCTAGAGGTCGGAATTTAATAAAATTTCAACTAAAAGTTTGTTTTAATTTGTGAATCGTAGAGGA TCGGGATCCTTTCCTCAAACCTAATTACGCTTTTAATTTCTGATATATCTTCCTTTAGTTGATTTATTGAAGCATCTTTT AACCGCAAAAAATATAGAATTAATGTGGTAAAAATCTGAAATTGAAGTTAATTGTTTTCCTTCCAACTCAAAACTCTAAT TCCAATTCACATATTAATAAACACTATCTTCTCTTCTCATATTCCCTGTTTTCATCTTCTATCTTCACAGTTTCTCTCCA ACACCCAAACATACCATGTTCAGCCTCACCTGCACTTTGACTTTTGTTATCCCTCAACCTTCTCCTCCTCCCTACCATCC CTAATATTAGGCACATCCTCATTTTCTTCACCCACCTTACACTTCCCATTTCCATCCAACTTATTCCCCCTTACTAGTAT ACTCATTAATCCATCATTTATGTGAATGTATAAAACAAAACCATTACACAAATTAAGAAATTTGATAGTAAATAAAGCAA AGCTCACAAGAATCAACCAACCAAAAACCCACGTTCTCCTCTTACTTCTGGTCAAAGTTTTACTCAAAAAAGCACCACTG ACACTGCTACCACTGCCTCAAAGACCAACCCTTTACAGTTCAACTTCAACATCTGGACCAATCAAAACAGATTCTCACAC CACCACCATTGTTTTTTTCTTCTTATCATTATCATCATCATACCTTTTTTTATTTCAACTCTTCAAAATCAGGGTCATTG TGACTTGAGTCTGTTCAATCATTGACTGTAACTAAACTCCCCAAAGTTCAGACCTTTTTCCTGTTCTTATCCTATTGTTG CTGAAATTTTTTCATGGGGTGTTGGAGAATCTCGTGTTTATAGCTTCATCATAACGCATGCTCCATTATCTTTTGGTTTC TCGTGCTTCTTGTTGGTGCTTTTTCAGTGTCTAGAAGCTTCTATTTGGTTGGCTCACTTTTCAATGAACTGGGGTTGCTT CAAAATTTTGTCTTGTTTAGATTAAACGAACAGCAGATTTTTGTCCAAAAAAAAAAGAACAGCAGATTCAGTGATTGTTT CTGTTACTGTTCGATCCGTGTCTTGTGTTTGGTACAAAAATGATTGTTTCTAAAAGAGAAGAGCAGATTATGTTGCCTTC AGAAGGTGCAAGTGAGGTTTCAAAGTCAACTTCATTGGATTTGAACCCAGATTCCCTTGATGGATCCACACCTGGTTCCA CTGATTACACTGATGTAGGGGTTGTGCCAGAGCACCAGAAGGATGAGCTTGAGCACTTGATATCAAATTTAGAGAGTATA AAATATATGAAGGCACTTTTGTTTTTGGCTTGTGGGTTTGAATCTGTGAAGTGAATGTTACTAATTTTGTTTTGCTTGAT CTGATTTGATTGTGTAGGGGAGGTTGAGCAGCTGAGGCTCAATCAGAGGATAGTGGATGATAAGAGGAGAGAAGCATTGA GTAAGATATTGGATATCAAAGGTAATGATAATAGTACTAATTGGAGGTTTTTGTTGTTATGCATTGGAATTTTGATGATA TTGTAGTACATCTTTTCAAGGGTTGAAGAATTTCATTTTGCTATCCAGGGAGCATTCGAGTATTTTGTAGAATTCGACCA ATTTTGATACCGGATAAGAGGAAAATCTCTGAACCAGTATCAGCTGGATCAGAGAGAATTCGGGTTAAGTTGGGAGGAAC AAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAATCAAGCCAAGGCTAGTATTAAACGTTAATGTGTTTACCAA CTTTTGCTATCTAATTGTAGTTCCATGTTCTAATGGAGGGCGGGTATGTGTGTCATTGTTTGAATCTCTACAGAAAATGT TTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGACACAATGTGTGTGTTTTTGCTTACGGTCAAACGGGCA CAGGCAAGACATTCACCATGGTTAGTCTAGTCAATTCTAATTTGTGTTGCTATTTAAGTTATGCTTAGTGTGTGTTTGGA TATCAGTTGAGATGTAAATTGACTTTTAAGTTTTAACCTGATCCAATGATGCACTAGTGACAACATTGCTAATGTATGGT GGCTCCTGTAACAATCTTAATTAGGATGGTACAAATGAGCATCCGGGAATCATCCCCCGTGCTCTTGAAGAGCTCTTTCG TCAAGCTTCTATGGATAATTCGTCTGCATTCACTTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAATGTCAGGGATC TTCTGGCTCCAAGACCTTCTGGTAGATCATATGAACCTATGACAAAGTGGTAACTTTTTTTTCCCTCCTTTTTCACTTAT GTTTTTTCAATGTATGATTGAATTTCATAGAGTGATCTATCTGAGACTTTGGTTCATCACCTCACTCATTTTACAGCAGT CTCAACATCCAAATAGATCCAAAAGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAATCTCTGATTATGCTAAAGC CAGATGGTTGTACAACAAGGGCAGAAGGTTCAGATCCACCTCATGGACTAATGTCAATGAGGCATCAAGCAGGTCACACT GGTGGGTTATAGGTCTAATTACATTGTCTAAGCTAATTTCATGGGTTTCTTAGCTTGATAGTTACATTATCTATTTAGCT TCATATATCTAGCTTGACAAGGATAAGCATATTTAGACGCGGGGATGCTTCAGAAGCCAAAAGCGAAATAAGTAAATTGT GGATGGTTGATCTTGGAGGCAATGAACGGTTACTGAAAACTGGAGCCAGAGGAGTAACACTTGATGAGGGCCGGGCTATC AATCTTTCTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGGGTCATGTGCCTTACAGGCAAGTATT CTTATGGTGTTAATTTATCAAGTTTAATTGTGTCCTTTTAGTCTATGTTTGGATATTTGTTGGCACGCAAACAGATTTTA GCACTCACTTTGGGGTAAAAAGTGAACAGAACTTTTTTTATGGATCGAAGTGAACGTTTCGTTCACATTGCACTGAACTG ATATCCAAACACACACTTAGCCTTTAGTTGTGATATGTGCTTTGATAAGCTTATAACTACAGAGATGAGTCTTTTTTACT GCTGCAGGTTTTTATGCCATCCCAATTATTGTTTCTTTCTAGACAATCAAAGTATCAAATAGTGACGATTTAATGCTTAC TTTGTTTGCAGAAATAGCAAGCTGACACAAATACTGAGAGATTCTCTTGGTATGATACTTCTCTCTTCTCCTAATTGCAA ATTCATTTGTATTGGAATATTTTTCACTTATTGATATTTGACTTATTGAGAGTAGAGGAAGAACAGTGAGCCATTTGTCA ATATCTGCATGAAATGTGCATGTACCAATGTGATATGCATAGTTCAAGATTTATGTTCAGACTTTTTTTGTTTTCTAAAA TATAAAATGCCTAATCTTTATAATCAAATACTTAAGGTGATGGCTCAAAGGTCTTGATGCTTGTGCATATAAGCCCTTCA GAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGCAGTAGAGTCCAATAAAGAAGTACA AGTGGTAAACTTACTTAAATTTATCTTAAACCAAAGTTCCTCAGTGGGAACTGCTTGAAGATTGCTAACTGCATGCATGT ATTGTAGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTAAGGAAGCTGAAAAGCAACGTC AGTATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATATTTTCAACCACATATACTCTT CCAGAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAATGAAACCCCTAAAGCATCTCA TAAGTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTGCTAGTCGCCAAAGGCAAAGTG CTGCAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGTTCAATCCAGTTTCCATGTTCC CAATCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAAATCCCGGTATGCTGAAACAAA TACTATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTCGAAGCAAGATGGTTACATCAT CTGATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATCTAAGGGTTAAGTGACATCTTA GTTGCAGAATGCAGATACTTTAATGTTGTGGAGTGGTTGCATGTTTACCTTCTTTCAGTTTGTATTTTCTTTAACAAATT GTAGCGAGAGTGTGGTGTTAATAGGTGTGTTTTCTGGGGCTGTTAGTGTTTGGGATCTGTTAACTGTTTAACATGGTCAT TCTCAGTTTTTGAGCTTGTTGGGTCTTGTTAGTCATTTGATTATGAGATTATATAGCAATTTGAGGTGACTAACTATTAC TGAAGTTTGTCTTGACTTTTATATGAATACAAACAAACAGTTACTTGGCCTTTACTATTAGC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0216300.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTGTTTCTAAAAGAGAAGAGCAGATTATGTTGCCTTCAGAAGGTGCAAGTGAGGTTTCAAAGTCAACTTCATTGGA TTTGAACCCAGATTCCCTTGATGGATCCACACCTGGTTCCACTGATTACACTGATGTAGGGGTTGTGCCAGAGCACCAGA AGGATGAGCTTGAGCACTTGATATCAAATTTAGAGAGGGAGGTTGAGCAGCTGAGGCTCAATCAGAGGATAGTGGATGAT AAGAGGAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCAATTTTGAT ACCGGATAAGAGGAAAATCTCTGAACCAGTATCAGCTGGATCAGAGAGAATTCGGGTTAAGTTGGGAGGAACAAGGAAAG ATTTTGAGTTTGATAAGGTTTTTCCTCAAGAATCAAGCCAAGAAAATGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCT GCAATGGACGGACACAATGTGTGTGTTTTTGCTTACGGTCAAACGGGCACAGGCAAGACATTCACCATGGATGGTACAAA TGAGCATCCGGGAATCATCCCCCGTGCTCTTGAAGAGCTCTTTCGTCAAGCTTCTATGGATAATTCGTCTGCATTCACTT TTTCAATGAGCATGTTGGAAGTTTACATGGGCAATGTCAGGGATCTTCTGGCTCCAAGACCTTCTGGTAGATCATATGAA CCTATGACAAAGTGCAGTCTCAACATCCAAATAGATCCAAAAGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAAT CTCTGATTATGCTAAAGCCAGATGGTTGTACAACAAGGGCAGAAGGTTCAGATCCACCTCATGGACTAATGTCAATGAGG CATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATGCTTCAGAAGCCAAAAGCGAAATAAGT AAATTGTGGATGGTTGATCTTGGAGGCAATGAACGGTTACTGAAAACTGGAGCCAGAGGAGTAACACTTGATGAGGGCCG GGCTATCAATCTTTCTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGGGTCATGTGCCTTACAGAA ATAGCAAGCTGACACAAATACTGAGAGATTCTCTTGGTGATGGCTCAAAGGTCTTGATGCTTGTGCATATAAGCCCTTCA GAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGCAGTAGAGTCCAATAAAGAAGTACA AGTGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTAAGGAAGCTGAAAAGCAACGTCAGT ATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATATTTTCAACCACATATACTCTTCCA GAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAATGAAACCCCTAAAGCATCTCATAA GTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTGCTAGTCGCCAAAGGCAAAGTGCTG CAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGTTCAATCCAGTTTCCATGTTCCCAA TCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAAATCCCGGTATGCTGAAACAAATAC TATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTCGAAGCAAGATGGTTACATCATCTG ATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATCTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0216300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIVSKREEQIMLPSEGASEVSKSTSLDLNPDSLDGSTPGSTDYTDVGVVPEHQKDELEHLISNLEREVEQLRLNQRIVDD KRREALSKILDIKGSIRVFCRIRPILIPDKRKISEPVSAGSERIRVKLGGTRKDFEFDKVFPQESSQENVFVEVEPILRS AMDGHNVCVFAYGQTGTGKTFTMDGTNEHPGIIPRALEELFRQASMDNSSAFTFSMSMLEVYMGNVRDLLAPRPSGRSYE PMTKCSLNIQIDPKGLVEIEGLSEVQISDYAKARWLYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDASEAKSEIS KLWMVDLGGNERLLKTGARGVTLDEGRAINLSLSALADVIAALKRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHISPS EEDVCETICALNFAKRARAVESNKEVQVELKKQKEKKIMELEEDIKEAEKQRQYLRDQIQNVELKLKESKKIFSTTYTLP EREDMETSISPKDDVKEVNETPKASHKCIKRSFSNSVPRFMNSTAASRQRQSAAEQELIVKSKGLRSVVARSSIQFPCSQ SLSYSDLRVKAMLRSSHGKSRYAETNTIPTERPKCNELDSKVVTPRSKMVTSSDPNLRVTLCHHRRRMSNLI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 43 43 - –
MobiDBLite
mobidb-lite
16 43 28 - –
Coils
Coil
54 81 28 - –
PANTHER
PTHR24115:SF835
70 629 560 1.1E-200 –
PANTHER
PTHR24115
70 629 560 1.1E-200
IPR027640
Gene3D
G3DSA:3.40.850.10
90 465 376 4.0E-114
IPR036961
SMART
SM00129
93 428 336 9.7E-118
IPR001752
ProSiteProfiles
PS50067
95 420 326 97.91
IPR001752
SUPERFAMILY
SSF52540
95 460 366 4.62E-101
IPR027417
Pfam
PF00225
127 420 294 5.1E-94
IPR001752
PRINTS
PR00380
164 185 22 6.7E-35
IPR001752
PRINTS
PR00380
289 306 18 6.7E-35
IPR001752
PRINTS
PR00380
321 339 19 6.7E-35
IPR001752
PRINTS
PR00380
370 391 22 6.7E-35
IPR001752
Coils
Coil
416 465 50 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0216300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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