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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0218100 |
Transcript ID | LotjaGi5g1v0218100.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT3G05140.1 ROP binding protein kinases 2; Swiss-Prot: sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK2; TrEMBL-Plants: tr|A0A0B2QJ01|A0A0B2QJ01_GLYSO Receptor-like cytosolic serine/threonine-protein kinase RBK2; Found in the gene: LotjaGi5g1v0218100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52436339..52437299) extracted from Lotus japonicus Gifu genome v1.2.
AGGGTCTCTTCTTCATGGTTTGTATTGCTTGTATGTAAAAACCTACGGTATAAACTTAAAATGTACTTACCGCTCATTTC TTCAATACTAATTTCAGGTTCAGATAGAAAGAAGTTAGATTGGAGTAAAAGATACAAAATTGCTCTGGGAATAGCTGATG GTCTCCTCTATTTGCATGAGAATTGTCATAGGCGAATCATTCACAGAGATATTAAGGCAGATAATATTTTGCTTACAGAG AATTTTGAGCCACAGGTTTTTGCTAAGCTTTGTGAAATAACTTAATTGCAGTATCAAGATTTTATTAATCAAGATTTTAT CCAGATTTGTGATTTTGGGCTTGCAAAGTGGTTGCCAGAACAATTGACTCACCATAATGTGTCAACATTCGAAGGCACAT TTGGGTATGAAAGTAAAAAACTGCAAATTCTAAAAATTCTAGAGTGTTTTTAGGTTCCAATGATTTAATATGATCACTTA ATTACTTGTAGGTATTTTGCTCCTGAATATTTTATGCATGGCATAGTAGACGAGAAAACTGATGTTTATTCCTTTGGGGT CCTACTTTTAGAGATCATAACTGGGCGTCCAGCTTTGGATCATTTGCAACAGAGTGTTGTGAAATGGGTAAATAATTTTT CTAGACAGTGGTGTATTATATTAGCTATGTGCCATTACATGAGAAGCCTCAACACTCTGATATCTTGTATATTTTAGGCA AAACCTTTTCTTGATGCTAATAGCATCAAGGACCTTGTTGATCCTTCACTTGGTGATGATTATGACAAAGGACAGATAGG TATTGTTGTTTTGACTGCATCATTGTGCGTTGAGGAGTCTCCTATCTTACGCCCCATCATGAGTCAGGCAAGTACACACA CAGCAAGATTGAAGAACCACATTCATTTTAATGAAAAAATATGATCATATATATACTTCTAAACAATATAAATGGGGCTT C
CDS sequence (LotjaGi5g1v0218100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTGTTCAGATAGAAAGAAGTTAGATTGGAGTAAAAGATACAAAATTGCTCTGGGAATAGCTGATGGTCTCCTCTA TTTGCATGAGAATTGTCATAGGCGAATCATTCACAGAGATATTAAGGCAGATAATATTTTGCTTACAGAGAATTTTGAGC CACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTGCCAGAACAATTGACTCACCATAATGTGTCAACATTCGAAGGCACA TTTGGGTATTTTGCTCCTGAATATTTTATGCATGGCATAGTAGACGAGAAAACTGATGTTTATTCCTTTGGGGTCCTACT TTTAGAGATCATAACTGGGCGTCCAGCTTTGGATCATTTGCAACAGAGTGTTGTGAAATGGGCAAAACCTTTTCTTGATG CTAATAGCATCAAGGACCTTGTTGATCCTTCACTTGGTGATGATTATGACAAAGGACAGATAGGTATTGTTGTTTTGACT GCATCATTGTGCGTTGAGGAGTCTCCTATCTTACGCCCCATCATGAGTCAGGCAAGTACACACACAGCAAGATTGAAGAA CCACATTCATTTTAATGAAAAAATATGA
Protein sequence (LotjaGi5g1v0218100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCSDRKKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKADNILLTENFEPQICDFGLAKWLPEQLTHHNVSTFEGT FGYFAPEYFMHGIVDEKTDVYSFGVLLLEIITGRPALDHLQQSVVKWAKPFLDANSIKDLVDPSLGDDYDKGQIGIVVLT ASLCVEESPILRPIMSQASTHTARLKNHIHFNEKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 194 | 194 | 1.2E-57 | – | |
SMART | 1 | 191 | 191 | 3.7E-5 | ||
ProSiteProfiles | 1 | 191 | 191 | 25.729 | ||
PANTHER | 5 | 178 | 174 | 1.7E-90 | – | |
PANTHER | 5 | 178 | 174 | 1.7E-90 | – | |
SUPERFAMILY | 5 | 184 | 180 | 4.79E-47 | ||
Pfam | 7 | 123 | 117 | 2.7E-26 | ||
ProSitePatterns | 36 | 48 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0218100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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