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LotjaGi5g1v0224200.1

Overview

Field Value
Gene ID LotjaGi5g1v0224200
Transcript ID LotjaGi5g1v0224200.1
Lotus japonicus genome version Gifu v1.2
Description Respiratory burst oxidase-like protein; TAIR: AT1G09090.2 respiratory burst oxidase-like protein; Swiss-Prot: sp|Q948T9|RBOHB_SOLTU Respiratory burst oxidase homolog protein B; TrEMBL-Plants: tr|A0A151U4U3|A0A151U4U3_CAJCA Respiratory burst oxidase isogeny protein B; Found in the gene: LotjaGi5g1v0224200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:53076417..53082644) extracted from Lotus japonicus Gifu genome v1.2.

ATGAGCTAGGATGTAATTTAAAGAATAAAAATACCAAAAACACCAGTTAGTAATAAAATGAAAGATACATTATCAATTTA AAATGAATGCTTATAAATTCGCGTCTCCTATGTAGCTAGATAGTAGAAATTTCCCTTGTAAGGTGAAGAGAGAAATTAAT TAGCTACTAAAGGCTTGCAAAATGGAGATCCAAGAGTCATGGCTGGATACGAGGTTCACTTGCAGCAATAGCAATGGCGG CTGTGACAAGCTCAAGGTCGATCGATACAAATCCGGAGCAACTCATTCCCTCCAATGTTTCAGGGTCCTGACAAAAAACG TTGTCCTTGAAGGTTGGTCGGAGGTTGAGAAGCGCTTTGACGGGTTGGCAATTGAGGGAAAACTACTCAAGACTCGCTTC AACGAATGCATAGGTACATATTAATTTCATCATTACTTTCACATTTGCATTGTGTATACCACATTTGAGTATTTGCTTAT GCAGTTTAATTAAGTGTTTATGTAAATAATTTTTTATCCTATGAGAGTTAAAGTTGTAATTAAGTCTTTATATTTTGAGT TAATTTTCAAGTACTTAGCTTACAAGTTTATTAAAATTATAAGCTCGCATGCATACATTAGTGTAAATGTGAGCTTTTGT TCTTGCTTTTTACGACCTGAAACTGCAAATTAATTGTTATATAAATGGTTCAATCACATTAGTTCTCTCTCAATGATTTA ATAAACTCTTATTGAGACTAATGTTATTGGTGATTTTAATCTGGGTGGAAATCGCAATTAGGAATGAGCGAGTTGAAGGA TTTTGCTTGTAAGTTGTTTGATGCATTAGCTCGTCGTCGAGGCATAACATCAGCTTCCATAACCAAAGATGAGTTGCGTG AAATTTGGGAGCAGATTACAAATCAAAGCTTTGATTCAAGGGTTCAGACCTTTTTTGACTTGTGAGAGTTCCTTTATTTT TTATGAATTCCTTTTCTCCTTCCAATTATATTTTTATGATTCAAACTATTTGAATATTCACGCTTGTATTGTCCATAAAC ATTTATTTTAAAAACTTAAGCTGTTAAGTAAATTGTGCATAAATAATTATATTGTTAATTTTTGTTCAAAAAAAATTATA TTGTTAATTCAGTTCTGATACTATATTAAGAACAAATTATAAAAAAACTTACGTTATTTAATATGAGTCACGTGAAGATT TTATATTAATATTTCTAACATATACTTCTAAGCAAGTTTCATTATATGAGTAAAATAGTAAAAAAATAAAACAAATAAGA ATAGTATTATATTTGTGGATTAACAAACCAATGGACAATGGTTATGGATCCTCATGCTCCTAACATGAACCACTTTCAAA GTGGGCCAAAATCACCAGTGAAACTTAGGGGATATACTAAGTTATACCTTTTTGACATAAAATAAAAAATAAAATATTCA CCCCATTACTCTGTTTGGTAACTCTTTCAAAATAAGAGTTTAGAATTACTCAATTCATTATGTAGAGCATAAAAGACTAA TTCATAAATTATAAATTTCGTTATAAAAGAAATCATGAAAAGTTAAGTTTAAAGGATATGAAACCCTTCACTTGAGGAGG AGGAGGAAGGGGCAGAGCTCGTCGAACACTACCGTCACAGTGTGACTCCTGAGTAAAGAGAAGAAAATGTTGAATTTTTT AAAACCATTAAAATGTTGGACTGCAATTTTTTTTTTATTGAAAGACTCTACTTTTCCTCTTTATTCATGATGAATTTTCT TTGTTGTAAACTTACCTCATAACAGGGTAGACAAGAATGCTGATGGACGAATTAATGAAGAACAAGTAAAAGAGGTAAAA AAAAAAATATTACTGTCATTTTTCATATATAAGAATATGTGAATCCTTAATTTTTTAAATTGGAATAGGGAAAACGTCAA CTTGTTACTAAGTCCGTGACCATTAGACTATTGGAATACAAATTTCATTCTTTTCTCTTTGCATTGTCTAGAATTGGGTG TTTTAAAACTCTTGTATAAGGCCTCTATGAATTTTTAAGGCTAGGTAAGTGAGTGTGGTTGTGTAACTCTCTTAGTCCTA GAACTTTTGTATATGGGTTGGAATATTCCTTGTACTCCTTAAGGTATTTATAAGTTTCTGTTGTTGTTTAAAAGCAAAAT TTGAAATACTAATTTCTATATGGTAGATATCTTATTTTACTAGAGACTTGTGGAAGTTTGAAGATTGTTGTATTTATGAT TCATTTTACAGATTATCTCCCTTAGTGCTTCATCTAATAAGTTGTCAAAAATACAAGAACGCTCTGGGGAATATGCTTCC CTTATCATGGAGGAGCTGGATCCGGACAACCTTGGATACATTGAGGTTTGTACTCTGCACACAAAATAATTGAAAACAGA TCAAGTTGATCAATTAGAAAATGGACTTGTAATTGGTTTGCAAGTAAATAATGTGCGATTTCATGCAGTTGTACAGCTTG GAAATGCTTCTATTGCAAGCCTCAGCACAATCAACCACAGATAGTAAGGTGGTGAGTCAAATGTTGAGCCAAAAGTTTGT TCCTACCAAAGAGAGGAACCCCATCAAGCGGGGGCTCCAAGCACTAGCATACTTTATACAGGACAATTGGAAACGTATTT GGGTTATGGCCCTGTGGCTCTCTATTTGTGTAGCACTTTTCACTTGGAAATTTTTCCAGTACAAAAACCGTGCCGTATTC GATGTCATGGGATATTGTGTTGTAGTAGCTAAGGGTGGCGCTGAGACACTCAAATTTAACATGGCCTTAATCTTGTTTCC CATCTGTAGAAACACCATAACTTGGCTCAGAAGCAAGACCAAGTTAGGAATGGTAGTCCCATTTGATGACAACGTTAACT TTCATAAGGTAATATAAATTTACATCATATTTGTTTCACTTTTCCCCCTTTATGATGTTACTCACTACTAAAACCAAGTT ACCAAATATTGAACACTATAATAATCATGAATAGTAGTCAAACATAGGATGAAAGTTACATAATGTTAGGATACTAATCT AAGTTCCATTCGACTATAGGCTACCCTGTGAGTTCTAATATCCATTGATCACAAGATGAATATTCTAAGAAACATCAGTT GCACTAATGTTTTATAAATTATATTGAGAGAAGAACAAAATCATAGAAAATAATGTAGCAAACATTTACACATTTTTTAT ATTTATTTAGGTTATCGCTTTCGGCATTGCAATTGGGATTGGATTGCATGCAGTTGCACATTTGACTTGTGACTTCCCAA GGTTATTACACACAACTGCAGCAGAATATGAACCTTTGAAACCATTTTTTGGGAAGAACAAACCCGACAACTATTGGTGG TTCTTGAAAGGGACCGAGGGTTGGACCGGAGTGCTCATGGTGGTGCTTATGGCCATACCTTTTATTTTGGCTCAACCTTG GGCTCGTAGGAACAGACTCAAACTCCCTAAACCTTTGAAGAAACTCACTGGTTTCAATGCCTTTTGGTACTCCCATCACC TTTTGATCATTGTCTATGTGCTTCTTGTCATTCACGGACACTTCCTTTACCTTAGCAAGAAATGGTATAAGAATACGGTA TGTTGTCTCATTCATATACTCTCATGTGATAACTTCAAACATGGCATTGTTATGTTTTTATCTGTATATCATAACCATTG AATTTATGAGATCTTTTGAATATTTATGAAGAAAGATAGACACAATGTTTCACTTGACAATATCACATGTAACGTGAGAA AATTCTAATTCATTATCATCGATTTGGATTCTCTATGTGTAGAATTCAGGCAGGCGCTCTTTATTCCCTTTTTTTTTTTT GCTTGCAAATATGTTTTTCATCTTATTGATTGCTGAATTTGGCTTAAAAAAATTCTCTGATATAGACGTGGATGTATCTC GCCGTTCCTATGATACTATATGAAAGCGAAAGGCTAATTCGTGCTTTCAGGTCTTGCTTCAAATATGTGAGGATTCAATC GGTAAATATTTTTAAAAATCTTCACTATCTTTTTAAATTTATTTGTGTTATTAATGGTGTTGTGAATGAAATTTCAACGT TGTTCTTTTTAAAATCCAGGTTTCCTGGTACACAGGAAATGTATTTGCATTGAAAATGTCTAAACCACAAGGATTTAAGT ACATGAGTGGCCAGTATATTTATGTTAACTGTTCAGACATCTCCCCATTTGAATGGTATGCAACTAATTTAATTTAAAAA TTCCTATTCCTATTGTTATTATTTCCATTCATATAGAAAGGTGACTTGATTATGTTATACTGGTTTCTTTCATCAGGCAT CCCTTTTCTATTACATCAGCTCCAGAAGATGACTACTTAAGCGTTCATATTCGAACTTTAGGTGACTGGACCTCTCAGCT GCAAGCTATTTTGGAAAAAGTAAATCTTCTACAATAGCATTATGTTTTTTCAAGAGATTCTTATGATGTTACAAATTGTA TGTTTCTAATTAAATGTTCATGAAAATTCCTGGATCATCTTGAATTGATACAGGCATGTCAACCATCAAGTGATGACCAA AAATGTATTCTACAAGCTAATACATTAGCAGACACCAGCAAACCAAGGTATGCTAAGTTGTATTTGATGGTTGGGTTTTA GTGCAACAATGCCACTCACTTGTATGGATATGTATTGGCTTGATCAACATATGTTTAGAAATAGAAAGGTGAATTATGTT TGGATATTTGTAGTGAAATTATGCATGTCTTAGGAATGATTTCTTTGTTGTGACTTGTGAGTAACATTTTAGAAAAGGTA CAATTGATGTCTTGTAAAGGTTAATAGTTGCAGCCATGCAGGTGCAGAGCATCATATATAGTTCCCCTAATCTCTTGTGG TTTGAAAACCCCCTTTTTTTTAAGGTTTGACCTCTGTATTTGATAAGGTTCTATGCTCTGGTGTTGGCTTATGTCTAGTT TTGTGTTTGTAAAATGAGTCTGAATGGGTATTTTAGTACCTCTTTTGATTACACACATTTTTACTTGAATTTTCAATAAT AATACTATTAGATTGGTCTATATATCTAGGATGGAATTATTTTATACCACAGGGTGTGTTGGACAACTCCTTATAAAAAT TCAAGCAAACAAGTGGGTGTAATTCCCAACACACACAAATTGGTTCATCTAAGATGATGTTATTTAATATTTGAGGTAAG TTAGAAAACCCCTAACTCAAATAAATATTGCAGGATTCCAAGGCTCTGGATTGATGGACCTTATGGGTCTCCAGCACAAG ACTACAAAAACTATGAAGTCCTCCTTCTCGTGGGGCTAGGAATTGGTGCCACCCCTTTGATTAGCATACTCAAAGGCATG CTAAATAACATTAAGCAGCAACAAGACATAGAAAATGGAGTGCTCGAAAGTAGAGTCAAGACTAACAAGAAAAAACATTT TGCCACCAAGCAAGCCTATTTCTATTGGGTTACTCGGGAGCAAGGTTCCTTCGAATGGTTCAAAGGGTTGATGAATGAGA TAGCAGAGAATGATAAGGAAGGAGTGATTGAGCTTCACAACTATTGCACCGGTGTGTATAAAGAGGGAGATGATGGTTCT GCTTTGATCACAATGCTTCAATCCCTCTACCAATCCAAATATGGCGTGGATAAAGTTTCTGAGACAAGGGTCAAGACACA TTTTGGTAGACCAAATTGGCGAAATGTCTTTGAACATGTTTCTCTCAAACACCCTGACAAAAGAGTCGGTAAGTATTGAT TTTGTTCTTTTATTGCTTAAATTTAACTTATAAGTCTTGCATAGCTAACTTCTAATAAACTAATTTATTTGTAGGTGTTT TTTACTGCGGGGCTCATGGATTGATTGGAGAACTAAAAAGGCTTTCCCTAGACTTTTCAAGAAAAACCAGCACAAAGTTT GATTTTCACAAAGAGAATTTTTAGACACCTGTCATATTTTTTTCCCTTTCAATGTGACAATACATAGATATATATAGTTC ATAGTTGGATCAAATTTGCAGTAGAGCTACATGTTTAGCTAGGTGCTTTTGCCAAGTGATATTGTCTTCACATGTAGTAT GAAGTGGATCGTGAAGTTGAGTGCTCTTAGATAAATCATCAATTAACTATGAGTTATCTATTTATGTAATAATTTTGTAG AATAAATATGATTTTTTCCTCTTTTCGTTTCTATCATTTTATTATATGCCACACTCAGATACTCGTCT 

CDS sequence (LotjaGi5g1v0224200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGATCCAAGAGTCATGGCTGGATACGAGGTTCACTTGCAGCAATAGCAATGGCGGCTGTGACAAGCTCAAGGTCGA TCGATACAAATCCGGAGCAACTCATTCCCTCCAATGTTTCAGGGTCCTGACAAAAAACGTTGTCCTTGAAGGTTGGTCGG AGGTTGAGAAGCGCTTTGACGGGTTGGCAATTGAGGGAAAACTACTCAAGACTCGCTTCAACGAATGCATAGGAATGAGC GAGTTGAAGGATTTTGCTTGTAAGTTGTTTGATGCATTAGCTCGTCGTCGAGGCATAACATCAGCTTCCATAACCAAAGA TGAGTTGCGTGAAATTTGGGAGCAGATTACAAATCAAAGCTTTGATTCAAGGGTTCAGACCTTTTTTGACTTGGTAGACA AGAATGCTGATGGACGAATTAATGAAGAACAAGTAAAAGAGATTATCTCCCTTAGTGCTTCATCTAATAAGTTGTCAAAA ATACAAGAACGCTCTGGGGAATATGCTTCCCTTATCATGGAGGAGCTGGATCCGGACAACCTTGGATACATTGAGTTGTA CAGCTTGGAAATGCTTCTATTGCAAGCCTCAGCACAATCAACCACAGATAGTAAGGTGGTGAGTCAAATGTTGAGCCAAA AGTTTGTTCCTACCAAAGAGAGGAACCCCATCAAGCGGGGGCTCCAAGCACTAGCATACTTTATACAGGACAATTGGAAA CGTATTTGGGTTATGGCCCTGTGGCTCTCTATTTGTGTAGCACTTTTCACTTGGAAATTTTTCCAGTACAAAAACCGTGC CGTATTCGATGTCATGGGATATTGTGTTGTAGTAGCTAAGGGTGGCGCTGAGACACTCAAATTTAACATGGCCTTAATCT TGTTTCCCATCTGTAGAAACACCATAACTTGGCTCAGAAGCAAGACCAAGTTAGGAATGGTAGTCCCATTTGATGACAAC GTTAACTTTCATAAGGTTATCGCTTTCGGCATTGCAATTGGGATTGGATTGCATGCAGTTGCACATTTGACTTGTGACTT CCCAAGGTTATTACACACAACTGCAGCAGAATATGAACCTTTGAAACCATTTTTTGGGAAGAACAAACCCGACAACTATT GGTGGTTCTTGAAAGGGACCGAGGGTTGGACCGGAGTGCTCATGGTGGTGCTTATGGCCATACCTTTTATTTTGGCTCAA CCTTGGGCTCGTAGGAACAGACTCAAACTCCCTAAACCTTTGAAGAAACTCACTGGTTTCAATGCCTTTTGGTACTCCCA TCACCTTTTGATCATTGTCTATGTGCTTCTTGTCATTCACGGACACTTCCTTTACCTTAGCAAGAAATGGTATAAGAATA CGACGTGGATGTATCTCGCCGTTCCTATGATACTATATGAAAGCGAAAGGCTAATTCGTGCTTTCAGGTCTTGCTTCAAA TATGTGAGGATTCAATCGGTTTCCTGGTACACAGGAAATGTATTTGCATTGAAAATGTCTAAACCACAAGGATTTAAGTA CATGAGTGGCCAGTATATTTATGTTAACTGTTCAGACATCTCCCCATTTGAATGGCATCCCTTTTCTATTACATCAGCTC CAGAAGATGACTACTTAAGCGTTCATATTCGAACTTTAGGTGACTGGACCTCTCAGCTGCAAGCTATTTTGGAAAAAGCA TGTCAACCATCAAGTGATGACCAAAAATGTATTCTACAAGCTAATACATTAGCAGACACCAGCAAACCAAGGATTCCAAG GCTCTGGATTGATGGACCTTATGGGTCTCCAGCACAAGACTACAAAAACTATGAAGTCCTCCTTCTCGTGGGGCTAGGAA TTGGTGCCACCCCTTTGATTAGCATACTCAAAGGCATGCTAAATAACATTAAGCAGCAACAAGACATAGAAAATGGAGTG CTCGAAAGTAGAGTCAAGACTAACAAGAAAAAACATTTTGCCACCAAGCAAGCCTATTTCTATTGGGTTACTCGGGAGCA AGGTTCCTTCGAATGGTTCAAAGGGTTGATGAATGAGATAGCAGAGAATGATAAGGAAGGAGTGATTGAGCTTCACAACT ATTGCACCGGTGTGTATAAAGAGGGAGATGATGGTTCTGCTTTGATCACAATGCTTCAATCCCTCTACCAATCCAAATAT GGCGTGGATAAAGTTTCTGAGACAAGGGTCAAGACACATTTTGGTAGACCAAATTGGCGAAATGTCTTTGAACATGTTTC TCTCAAACACCCTGACAAAAGAGTCGGTGTTTTTTACTGCGGGGCTCATGGATTGATTGGAGAACTAAAAAGGCTTTCCC TAGACTTTTCAAGAAAAACCAGCACAAAGTTTGATTTTCACAAAGAGAATTTTTAG 

Protein sequence (LotjaGi5g1v0224200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEIQESWLDTRFTCSNSNGGCDKLKVDRYKSGATHSLQCFRVLTKNVVLEGWSEVEKRFDGLAIEGKLLKTRFNECIGMS ELKDFACKLFDALARRRGITSASITKDELREIWEQITNQSFDSRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSK IQERSGEYASLIMEELDPDNLGYIELYSLEMLLLQASAQSTTDSKVVSQMLSQKFVPTKERNPIKRGLQALAYFIQDNWK RIWVMALWLSICVALFTWKFFQYKNRAVFDVMGYCVVVAKGGAETLKFNMALILFPICRNTITWLRSKTKLGMVVPFDDN VNFHKVIAFGIAIGIGLHAVAHLTCDFPRLLHTTAAEYEPLKPFFGKNKPDNYWWFLKGTEGWTGVLMVVLMAIPFILAQ PWARRNRLKLPKPLKKLTGFNAFWYSHHLLIIVYVLLVIHGHFLYLSKKWYKNTTWMYLAVPMILYESERLIRAFRSCFK YVRIQSVSWYTGNVFALKMSKPQGFKYMSGQYIYVNCSDISPFEWHPFSITSAPEDDYLSVHIRTLGDWTSQLQAILEKA CQPSSDDQKCILQANTLADTSKPRIPRLWIDGPYGSPAQDYKNYEVLLLVGLGIGATPLISILKGMLNNIKQQQDIENGV LESRVKTNKKKHFATKQAYFYWVTREQGSFEWFKGLMNEIAENDKEGVIELHNYCTGVYKEGDDGSALITMLQSLYQSKY GVDKVSETRVKTHFGRPNWRNVFEHVSLKHPDKRVGVFYCGAHGLIGELKRLSLDFSRKTSTKFDFHKENF 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 241 241 -
PANTHER 17 791 775 0.0
PANTHER 17 791 775 0.0
Pfam 25 123 99 2.3E-31
Gene3D 26 141 116 2.5E-41
SUPERFAMILY 56 196 141 3.12E-13
SFLD 64 791 728 0.0
CDD 103 150 48 1.13733E-6
ProSiteProfiles 120 155 36 10.943
ProSiteProfiles 164 199 36 5.615
SFLD 205 791 587 0.0
Phobius 242 261 20 -
TMHMM 242 261 20 -
Phobius 262 287 26 -
Pfam 281 438 158 7.0E-20
Phobius 288 305 18 -
Phobius 306 325 20 -
Phobius 326 344 19 -
PRINTS 327 345 19 6.8E-19
Phobius 345 381 37 -
Phobius 382 403 22 -
TMHMM 382 404 23 -
Phobius 404 423 20 -
PRINTS 420 440 21 6.8E-19
TMHMM 424 446 23 -
Phobius 424 444 21 -
Phobius 445 449 5 -
Phobius 450 466 17 -
Phobius 467 605 139 -
Gene3D 467 560 94 1.5E-16
ProSiteProfiles 477 600 124 14.237
SUPERFAMILY 482 597 116 2.2E-18
CDD 482 699 218 1.37367E-43
Pfam 482 597 116 9.3E-30
PRINTS 586 599 14 6.8E-19
Gene3D 589 791 203 6.2E-48
SUPERFAMILY 601 791 191 3.16E-9
Pfam 604 773 170 2.3E-48
TMHMM 606 623 18 -
Phobius 606 627 22 -
PRINTS 609 626 18 6.8E-19
Phobius 628 791 164 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Molecular function Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0224200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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