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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0226200 |
| Transcript ID | LotjaGi5g1v0226200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein PP2; TAIR: AT1G09155.1 phloem protein 2-B15; Swiss-Prot: sp|O80494|P2B15_ARATH F-box protein PP2-B15; TrEMBL-Plants: tr|I3SET7|I3SET7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0226200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53303556..53309795) extracted from Lotus japonicus Gifu genome v1.2.
CCCCATTATATATCACTTTTCTTTTTATCTACTGATGTACAATACTAACCAAGAATTATAGATTTATAGTTATCCATTGC AATAGTAGATGTTCTTTGAATTTGTTCCACGACTAGTCGGCACACCAACAGAACATGTCAAAGTCCAACAATGACACCTA TCAAATTCGCCTATGTTAAGCAGCCCAAAAGCCAACCTTGATCATATTCTATTATTTTCTAAAGACCAAAGTACCAATCT CCAAACCTCAAATGGCAACTGGATCCACCATAGAAACCTTGCATGAGGAATGTGTTTCAGAAATTCTATCTCACACATCT CCACCGGACGCATGTAGATTCTCCATGCTCTCCTCAACTATGCGCTCAGTGGCTAACTCTGACATGCTCTGGCGTAGCTT CTTACCCTCTGATTACTCTGACATCATCTCAAGAACTCTTAATCCTCTCTCCCTCAATTCATCATCTTCATTCAAGGACC TCTTCAAAGCTCTTTGCAATCCACTTCTCTTAGATGGTGGCACCATGGTAAGTATATATTATGTCAGTTTGAATCAGCTT CTTTCATCATTCATTTCATGCTTGATTTACAACAATAGAACATTTTCTCTTATTAATTTTGTTCCTTTGATACATTCAGA TTTTCAAATTGGACAATTTTTCTGGCAAAAAATCCTATATTCTTTCTGCAAGAGAGCTATTGATAACATGGAGCAGTGAT CCAATGTATTGGACCTGGAAACCAATGCGTGAATCAAGGTAATTAAATTGACTTTTACTTATGTGTGTATTTGGATTAAA CTCAAATACCTACTTGATGTACTATTATTCAAAAAAAAAAAAAAAAAAAATTGGCACGATCAAGTTTTCTTATTTCAGAA TCAATTTTGACTCAAATAGATTATGGAATAAGGATTTCCGGAAGGTGAATAATCAAATTAGTCCCCAAAGCCAAAAGTGT TAGTTAGTAACAAGTTCATTCATAAAAAAAGGAAATATATCTACCACTCTTAATTGTATAAAATGCCTATCAAGTCATAT GATTTGATCAGAAAGACTAATTTGGCCGACATTTACACAATATGATACCGCTTGTGTATTTTCCAAGTCCTGAGACCAAC TTGTCATCATGGAACAATTTCAGGAATCAATTTGATCATTCAATAAAATTTCAAGACTTAACAGGAATTTAATAATTTTA CAGATTCCAAGAGGTAGCTGAGCTAAGAACTGTGAGCTGGTTAGAGATTCAAGGCAAAATCGGGACACAGATTCTAACAC CAAACACGTTGTACTCTGTTTACCTCATCATGAATGTCTCACACCGTGGTTACGGCCTTGATTCTGCGCCGTCTGAGGTA TCATTGACGGTGGCGAACGACGTCGTGCACACCAAGAAGGTGTATCTGTGGAAGAAAAATGAGAAGAACATGTGTGAGAA GTATACCCTGTTTCGCGGGTTCCGTAGGGATGTTGCTGGAGAGACGTTGATCATTCAAGATCAGAAAAATCCAGGTCCAT TGAAGTTATTATGGAGGTGGGTTATCAGTTGAAGGGAGGGCTTATAGTTGAAGGCATTGAAGTAAGACCTAAGCAAGTTT GACTAAACAAGATCAAGGGTATAGGGAAAGTTAATCCTTGCTTGTACAGTGTGAGAATTAATTACTTGATTTTAGCCATA GAAGCTGCCATGTATAATTGCAAATAGCTCGGAATAATTGGGGGGAGAATTGTTTTTTTTTTTTTTCAAAATTATAGAGT ACAAGCGCCAAAATAAAACATACAAACTGAAAAAGAAAAATAATAAATGTTAGAATAATTAATCCTTCACATGAAAGAGT TTCATTTGTGCAAGAAAGAGTTATGGTTTTTTAATTGACCAATATCTTCTTCTTTTTTTGGAGGGGAGGGTGGTTTTTAA TTTTTTATCCTTTGCTGTCTGCCGAGATTAATTCGTGCACTATCAGTAGAAGATTTTTCTGTTTGGTTACTTGACACCGT AGAGGACATGAATGTTTATGCAAGGGCCCTATATGCTTTTATAAGTCTTCGCAAATCGCGAAAAATTACGGTGCCCACTA GGGTGGGGAATTATCAAACTGGTCCACCCATGGACCAGTCTTTTTGACTGGAATTTTCAGGTTTGCCGGTTCTGGGCTTG TATGGGTATTGTTTTCTGATATTGCAATTAAGGGCTTGTGAAATACGGAAAATACGAATCCCCCACCAAATCGAAATGAA AAACTAAGGGAAGGAAGGGAATAACAGCAAAGTTCATTTCCCCTTAACCGAGAACTCATGTCTATCCCTAAACGATAGTC TCCATTGTTGCACATCTTGAAGTACTTATGTTTTGTAAAATCTGGAATCAGTGCTGGCATCTAATCTCGTTACTTCTTCT TTAGGGTGTGGTGGTGTTTGTTGTCGTTCTTCGGTGGGTGTCTCTCTATTCCGATTCCGATCTCGTACTTTTTCCGAAAC AGGTGAGTTGAAATAGAAGATTTGGGTATGAGTTGAATCGTGGGTGTCTCTCTATTCTGCGGTTTAGGGGGTTTTGATTG CCTATAGACTATCACTCAAGTGCTGTCGTTTTTTACAATTTGGGTATGTGATTTGGGTGTGGGGTTTTTACAATGATGTT CGGATTTTATGAATTCTGGTAACTTAAGTAAGGATTTGAGACCTCTGGGTCATAAGTTCTTACTCCATTAGTGATCTGGA AGATGAGGTTGTTAATTTCCCCCATTAAATTTGATAAATTGAACACTGTTGCAGGGACACTTTACAACTGGTGAGTTGTT TTGATGGCAGACTTAGAAATTCCCAGTTGGTGTTCAGTTGATGAAGGTATTATTTGTTATTCTTCTTTCTAGTTTCTATT TTGCATAGGAACAATGCAAGACATGAAATATAATCTCCTTTATTAGTGGCATGATTCCTGAACCAACATGTATGTGGTTA AGTGACATTTTAACACAGTAGGAACTCGAGCCAATAGGTTAAGTTAATGGTTTCCACTCATTCTGAAGGTTGTATTGGTT TGAAAGATCAAATTTGAGTTATTTTGTTTTGTTGTTATTTCTTTTATATGTTTTAATTGCTTTCTTGATAGGTAACCACC TCTTAGTACTTTGGTTAGTTAGTCCTTTAAGGAAAATCATGTGGTTAGTTAGTGAGTTGGTTTGAGGTTAGAGAGAGTGA AGAGAGACTATAAATAGTGGAAGGTATTGAATTTGTAATTGGGAAATTGGGTAGAGTCTTGGTCTCTCGAATACCAGGTA GTTGATGTAGTTCTTAGATCTTACTTCCAATGATATTCAGTATTCTCTTTGTTCATTGCTTAGCCAGATCCAGAGAAACC TGATCCTTTCTTTACAATAATATTTACTAACCTGGTACTGTAGTGAGAAGTTGCAGTTTTTCTCATAGTTAGATACCTGT AATTTATTATTTGACTTGGTCCCTTGGTGCAGGTTTTTCATCAGATGGTGAAGGCAAAACCGCTGCTGTTGCTGGAATAG TTTCGTCACCAACACCGAAGTCGTCGGAGTCAATTGGTGAGGATGAAAATGGTGAAGCTGTTGCTATCGATACTATGGAC GATGCTGCTAGTACTTTGTGGGATTGCATTGATGCCAATGAGATGAAGAAGTTTCATTTTTTGAATCGGCAGGTAGCATA TGAGTTCTACAACTTTTATGCTAGAGTGAAGGGGTTCTCAATAAGGAAAAGCAAGATTTTCAGAAACAAGAAAGGTGTAA TTGTGCGCCAAGACTTTGTGTGTCATAAGGAAGGTTTTCGCGAAGAGAAAAACAGAATGAGGGAAAACCGTAAGAGGGAA ACTAAGGTTGAGACAAGGTGTGGGTGTTGTGCAAAAATGAGAATTCGTTTGGTGGGTGATAGTGATAGTGGTAGATGGCA TGTTAACTTATTTGGAGATTGTCACAATCATGCACTGTTAGAGGGAAAGCAAGCATCCATGTTACCAGCACATCGGAAGT TAAATGAAGGCGATATATTGGGAATGAATAGTATGCGGAAAGCTGGGATTAGCACCACACAAATATACAACTTTATTGCT GACCAATCCGGGGGTTTTGACAAAACCAATTTTCTCAAGGTTGACATGTGCAATCAATTGACCAAACAGAAACAAAAAGA GCAGTGTGATGCAAAAGCTGTTTTGGTGTATTTGAAGGGACTTGGTTCAGGTGATCCAGGCATGTTTTGGTCACACCATG CTGATGAACAAGGCAATTTGAAACAACTGTTTTGGGCTGATGGGATTAGTCGAATGGATTTTCAAGTGTTTGGCGAAGTT CTAGCGTTTGATGCAACTTACCGGAAGAATAAATATGGTTGCCCCATTGTTGTTCTTGTTGGAGTTAACCACCATTGCCA GACTATTGTGTTTGGAACTGCAGTTTTGACAAATGAGAAAGAGGAAAGCTATGTGTGGGTACTTGAGCAGTTTTTGGCAG CTATGAAGGGTAAAGAACCAAGTGCAGTTATAACTGATGGTGCTCCTGCAATGCGGAATGCTATTAGTCGAGTATTACCT AGAGCTCATCACCGTTTGTGTGCGTGGCACCTTTTACAAAACGCACAGAGAAATGTGGGTGACCCTGTTTTTGTGAAAGG TTTTAAAAGCTGTATGTTGGGCAATCTAAGTGTTGGGCACTTCAAAAAAAAATGGGTACAATTGGTTAGCGATTTGAACC TTGAAGACAATCCATGGGTTCAAGGGTTGTATGAGAAGAGGCACATGTGGGCTACATGTTTGATGCGGGGTAAGTTCTTT GCCGGTTTTCGAACGACATCTCGCTGCGAAGGTATGCATTCACAAATTGGTCGCATTGTGCGATCTCGAAATAGCCTTCT TGAGTTTGTTCAGTATTTTGACCGTTATGTCAATTACATGCGATGGAGTGAGGTTGATGCGGACTACAAGTCAGTGGTAG GGGATGCTGTGCCTAAGACTAATGTTCGAGCACTTGAAAAATGTGCTGCAGATCTATATACTAGGACTGTTTTCTTAAAA TTCAGGCCATGGCTGAACAGTGGTAGTGTAATTAAAGTTGCTGCCATTAAGGAGACATCATCATGTATGATATATTCCAT GTACAGGTATTGCAAACCTGGTAAGTTGTGGCATGTCGCACACGATGTACAAGTGTCCACGTTTAGATGTTCATGTCAGC GGATGGAGACGTTTGGTCTTCCATGTGATCATATTATTGGTTTGTTGGTGCATTTGGACATTGATGTGATACCTGAGAGT TTAATATTGCAGAGGTGGTGTAAGTCAGCAAAAGATTGTATGAAAGGAAATTCTGAAGCCTCATACAAATTCTGGGAGTC AACAGTTCTTGCTAGGCTGGGTTCTTTAGTCATGAGAAGCAGGGAGATGTTTAATCTTGGGTGTGAATCTATGGAAGATT ACTTGGACACAGTTGATGTAATGGCAAAGCATGTTATGAAACTTAAGGCAAAAAAGGAAGCTGCCCTTGGAGCTGGTGGT GAGAACCTTGATGAAGTGGTGGATAATGTCACAAATCCTGTCGTAGTGAGGAGCAACGGACCAGGTGGAACCTCAACTGG GAATGGAAACAAGGGGAAAAGAAAGTGCACAGTGTGTAAGGTGGAAGGCCATAACAGGGCAACATGCCCCCAGAACAAAC GAGCCAAAGTTTGTAATGAAGCTGGAGCTGGTCCTTCTACTGCCTCCTTGGTTTGAAGTTGAGGTAATGAATTGACTAGT AATGTAACATACATGATACCCATGATATAATCTTACCCATAGGAACTGACTGATTAATGCATTGTTTGTTGCAGGAACTG CATATGGCTGAATGTGTTACAATTGTGATGTTCCTAGGGATTCTAAGGCCTTTTGTTTTTTACTGGATATTGGTGTAATT GACTAAGTTTGATGCAACATGATATAAGTGGATATTGTCTGTAACAGATATTTGTGTTTTTTCCATTCCGTGGTAGTAAT GGTAGTTAAACTTAATTGTCAGCATTATTGTGTAATGATTTTCAGATAATTGGCATTATGTCTGATGCTATCAGGTTATG CAAACTGTGGTTGTAGTCATATTAAATCCCATCTTTCAAGTATCTACTATGGGAGTATTTGTTCCAGAATGTCCATTATA TTATTACTATGACACATCTAGTATGGGAGTATTTGTTCTAGAATGCCCATTATATTATATCAGATAAAGTTGCCTGGTAC
CDS sequence (LotjaGi5g1v0226200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACTGGATCCACCATAGAAACCTTGCATGAGGAATGTGTTTCAGAAATTCTATCTCACACATCTCCACCGGACGC ATGTAGATTCTCCATGCTCTCCTCAACTATGCGCTCAGTGGCTAACTCTGACATGCTCTGGCGTAGCTTCTTACCCTCTG ATTACTCTGACATCATCTCAAGAACTCTTAATCCTCTCTCCCTCAATTCATCATCTTCATTCAAGGACCTCTTCAAAGCT CTTTGCAATCCACTTCTCTTAGATGGTGGCACCATGATTTTCAAATTGGACAATTTTTCTGGCAAAAAATCCTATATTCT TTCTGCAAGAGAGCTATTGATAACATGGAGCAGTGATCCAATGTATTGGACCTGGAAACCAATGCGTGAATCAAGATTCC AAGAGGTAGCTGAGCTAAGAACTGTGAGCTGGTTAGAGATTCAAGGCAAAATCGGGACACAGATTCTAACACCAAACACG TTGTACTCTGTTTACCTCATCATGAATGTCTCACACCGTGGTTACGGCCTTGATTCTGCGCCGTCTGAGGTATCATTGAC GGTGGCGAACGACGTCGTGCACACCAAGAAGGTGTATCTGTGGAAGAAAAATGAGAAGAACATGTGTGAGAAGTATACCC TGTTTCGCGGGTTCCGTAGGGATGTTGCTGGAGAGACGTTGATCATTCAAGATCAGAAAAATCCAGGTCCATTGAAGTTA TTATGGAGGTGGGTTATCAGTTGA
Protein sequence (LotjaGi5g1v0226200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATGSTIETLHEECVSEILSHTSPPDACRFSMLSSTMRSVANSDMLWRSFLPSDYSDIISRTLNPLSLNSSSSFKDLFKA LCNPLLLDGGTMIFKLDNFSGKKSYILSARELLITWSSDPMYWTWKPMRESRFQEVAELRTVSWLEIQGKIGTQILTPNT LYSVYLIMNVSHRGYGLDSAPSEVSLTVANDVVHTKKVYLWKKNEKNMCEKYTLFRGFRRDVAGETLIIQDQKNPGPLKL LWRWVIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 113 | 112 | 1.3E-7 | ||
| PANTHER | 4 | 210 | 207 | 8.8E-105 | – | |
| PANTHER | 4 | 210 | 207 | 8.8E-105 | – | |
| ProSiteProfiles | 4 | 50 | 47 | 8.623 | ||
| SUPERFAMILY | 5 | 83 | 79 | 1.87E-13 | ||
| Pfam | 6 | 50 | 45 | 2.9E-5 | ||
| Pfam | 102 | 204 | 103 | 9.2E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0226200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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