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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0231100 |
| Transcript ID | LotjaGi5g1v0231100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kelch repeat protein, putative; TAIR: AT1G74150.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q5EA50|RABEK_BOVIN Rab9 effector protein with kelch motifs; TrEMBL-Plants: tr|K7LJG5|K7LJG5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0231100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53839586..53844491) extracted from Lotus japonicus Gifu genome v1.2.
GCTTAATTAATATGGAGGTAGAGGGAAAAAATAATGGTTGTTTTCACAACAACCATCTGTTGCTGTTGGTTGCCAGTGAT TTGGACATGAAAGCGCCCATCTTTTCATGTCTATTGATATTGATAGTTGATACATCACTTGGCTTGTTGATGTCTTCTTT TGACTCTCTCTTTCTCTTTCTCTACTACTACTACTTCACCCTCTTACTTGTTTATTCATCATCGTTGTCAAGCACTGTAT TGAAGTATTAAACACATAGCAGAGAGAGAAAAACACAGATAGAGAAACATAAATGGGGTCTTTGGTTGCTGAAACAGAGA AGAAGAAGAAAGCAATGTGGTTGTATCCTAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGACACTCTGCTTGCTTC TCTGGGGGGCTTATGTATGTCTTCGGGGTATGAATGAAATCTTTCTTACTCATTCAAAAATGCATAAAAGATCATTTTCT TACAAGTTCTAGTTAATGGGGTGTTCTTATTAATGGTGTCTGAACTTTCTCATATGTTTTACTCCTTTGGAGCTTGTTAA AGGGTTGTGCTTATTAATGGTGTCTGCACTTTCTCATAATTTTTGCTTCTTTGAAGCTCTGGTGTCTCCTGACTTAATCA CAGAATTTTCATTCTTGTGATGTGTTCAATTATTTCATAAGCTCCTAGTACAACTTTCTTAACTTCCCTTGCTTTCTAGC TATCTTTGGTTAACGACCAAACCACTTTCTTCTCTGAATTTTAGTTTTTTCCTAATTTCTCTCAACACACATATTTCTTG AAGACACTTAACTGATTCATTTTTCTTTCTCTAAATAGTGGGACAATACGTGTTTCTTTTATGATCATAAATTTTGCTTT CTTAATATAGCAATGTTCACCATTTTGGTTCTTCTCTGTTAACAACCAGTGCTTTCATTTCTTTGTAATCTGAGAAGTGA GAATCTCTATCTTAGTTATCACTTAATTAGCTCTCTATTCACCTTTTTATCTGATGATGAAAAGTTTAATTATTGCTAAA ACTCTCATATTACCTTGCTAAGCAAAATTATCATTAAACAAAATAACTCAATTTTTCTGTTGAGAGAAACTCTTATGTGA CAACAAGATGGTGATAGTAGTTGTTGAATAGCTACAAAGAAAGGCATGAACATAAGTCTCATTTCCTTTCTTTGTTGGAT TGCTTCAAATTCTACACATGTGAGCAAGTTTCTTCCTTTGATTTTGTTCTCTCCAAAATACTTACAGGGATTAAACCGAA CTCAGACCAGGTGCCTTTATCTCTCGATTTAGTCCCTGGAATTATGGAGAGAACAGGTTCCATTGCCTTAAAAGCTAGTG AACATTTTTGAGATTTTTTTTTAGTTTTTTACTAATTATGATTCACAATCTTGACTTTTCAGGGCTGTTGTGGGGGGCTA CATTTCAGTGATGTTCTGACTTTAGACCTTGAGAGAATGCAATGGAGCAAGCTTGCTACCACTGGTGAAAAGCCAGGCCC AAGAGATAGCCACAGTGCTGTTCTTGTGGGCCATAAAATGATAGTTTTTGGTGGCACAAATGGGTTCAGGAAGGTGAATG ACACTCACATACTAGATCTTGTCACCAAAGAGTGGATTCATCTTAAATGTGAAGGGACTCCACCTTCTCCAAGGGAGAGT CACACTGCCACTCTTGTTGGTGATGAAAGGCTAGTGATTTTCGGTGGAAGTGGAGAAGGTGAAGCAAACTATTTAAATGA CTTGCATGTTCTGGACCTTGGAACCATGAGGTGGAGCTCTCCTGAGGTTAAAGGTGATTTTCCTGTCCCTAGAGACAGTC ACATTGCTCTTGCAATTGGTGACAAGGTTGTTGTGTATGGCGGAGACTCTGGTGATATGTACCATGGTGATGTTAGCATG CTTGATATGGAAACAATGACTTGGTCAAGGGTATGGTATCCTTTTTTTGTAGTTTTGTTGATGTGGAATTGAATGATTAA AGATAATGTTTTCAAACTACATGGAGCTTAATAGTGTTGTTTCATTTTGTTTTTTTCATTTAAAATGACAGTTGAAAGTT CAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATGCAGCAGTAAATATTGGAAACAAGGTGAGTTTTCTTAGTTTGTATAT AACATCAGACTAATAAAGCAGCTAACATATACTTTATGAAATGAAAATTGTGCATATTGTTTTTAATTACCTCAGAAATC AGCAATAATATTCATTTCTCCTATCACTTGTGAATGATATCCATTTTCATCAGCACTTACTTATTGCTTTTGGATAAAAT TGATTTTGGTAAAATTAATTATGGTAAAAGTGTGTTGAAAGTGAAAATGATTTATGTTTTACATTTACGAGAAAAGTGAT TTTTGTAGGGTAATATTGTGAAATCCGATTGCCAAATCTCACAATTGATTATATTCAACGTAAAAGTTACTTTCTATAGC TGCTACGCAGATTCGATTGTGTAACTGAAATCAATTCTCAAATATATATATTTTCACCCAAAACTGATTGTACTCAATGA CAATTGAGTTTGAGGTCCTGGACGGGGAACCAAACACACACTCAATACTATATGGTACTATTTTGAACTTATCAGCTAAG TAGATCAATTCTTCATAATTTACAGCTCTACATCATTGGAGGGGTTGGAGATAAATGTTATTGCAATGACATATGGGTCT TTGATATCTTCACTTGTTCATGGACTCAACTTGTTATACCTGGTCAACAACCGCAGGGGCGGTTTTCTCACACAGCTGTT GTTACGGACATGGATATTGCTATATATGGCGGGTAGGTTCCCATCAAATTAGTCGACTATTGGTGATGAAATAGGATGAA TTGAGACAGCATTTTGTAAATACCGAATTATCTTGAATATATTCACTATCTTTGGACAAATGACATTATGATAAATTAAT CCTATTTCGTTTTCTATTTCTTTCAGCATACAAGTTTTTCATTTTCATTCTGATAGCTTGCGTTTGTCTTATAGCAGGTG TGGGGAAGATGAACGTCCTTTGAATGAATTGTTAGTATTGCAGCTTGGAGCAGAGTTTCCAAATGGACGTTACAACATTT CCGGGTGTAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGAACCACACCAGGAGAAGCTGATATAAACTCGGTACAA AAGTTCATGTAGCTAGCAATGTTGTTAGTTGTTAAAACTTATAAGTACTTGCCCATGTTATAGTTGATTAAAGAAAAACA ACTAAAGATGTTTTTTTTTACCAGAAAATTCCACACATGGGGAATAATGTGGAAGTGTTTGGAAAATGGGGTTCTGAAGT TGCATCCGAAAGAGCACTACCTTATCAATTTAATTCAGGTGAGTTAGAGTTAAGAGTGTTTACCATCTGAAAAAGGATTC TCAACTTGGTTGATTGAAAATTGTAACTTTAATTATGCAGGAACTTATCAACAAAAGAGGCGGAAAATTGCTCCTGTGAA GGTGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTCTCTCAACATTCATCTCCATCTCAATCTGATCAAG AACAGACACAAGCTCAAAAGGCCAATGCTTCTGCCATGGATTCTCATCGCGTAAAACTGATCCACAAAATTCCAAGCAAT TGGCAGCATGGGAGTGTCTCAAGCTATAAGAGAGTTTTGAAGAACGTCGCGCGAAGAAGTCCACAAGATCTTCATCACCT GGAATATCAACCAACACAAGAACGCTATCTTCATGTTGATGATGATATAAACCGAGGTCGTCACCAAGCGGCAGAACACA AGCCAATGGCGCGAGGATACGCTCAACAACTGGTAGTCGATCGATTGCTTTCTCAAATCTCAAATTTCTGCTTCGCAAAA CATCTTGCTCAAACTATTTTTTGTGTCTTCGTATAAAAAACAGTAGTGAATTAAGTAAGTCCTTATTCTTTCGTGCTCTC TTGATTTTGAATCCTAGGTTGGAGCTGAAGTTCGAGGGAAAGTAGACGGCGCCTTTGATTCGGGTTTGCTGATGACAGCA ACTGTGAATGGAAGAGTTTTCAGAGGAGTGTTGTTTGCACCAGTAGTAAGCTTTTGAACTTTGCTTTTATAACATGTTAC ATTTTGATTGTTGTAGAAATTAGCAAAGTATGAAGTTAATTTCATTGATAAGCATGTTGATCACCAATAACTGAATGAAA GTTATCAATAACGGAATAGAAATTAACAACTAAGCAACTGATCCTCTAATCTCTAACTAAAATACGTACAGCTAACAATT GTAGTGCAAGTGCATTAACCATTTTTTGGTAACAAATTTATCAGGGTGCAGGAGTAAGCTCCACCAGTGTTGAGCCAAAT TGTTCTTTACCATGTTTATTTCCCTCCTCCACTCAACCATTGATGAACTCAAATCATGTGGAGAATTTGAGGGGTTTGCG GCAACCGCTACTGGCTCGGCCATCTCCAATCATGAGAGGCTCTGCTGCACCTTTAGCAAATGAACGCAAAGTGAGGAGTG ACCTTCAAGGGTTGGTTTTGACACTTGGAGGACCTGCTGCAAGTGGCAACCATGCTTGATCATTAGGTGAATTGTTGAGG AGGCTAATAAGGTTTATGTAAATTTTAGAAATAAATCATGTGCACTTGAATGGTTATGCTTTTCTAGGATCCATCATAAT ATTTGGTTTTAACTGTTCTGGAATAAGACTTGTTCGCCTACCATAAGCCCATAACAATAGTAACATAATCGTGTTTGGAA ATCTTTTTGCAATTGATTCTAATGTCCGAATTAATTCTATGGAGAAGTTTCTTAAGTGGTTTCAGGGTGCCACAATTAAA ATTGGTCATGAGAAACTAATACAAAT
CDS sequence (LotjaGi5g1v0231100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCTTTGGTTGCTGAAACAGAGAAGAAGAAGAAAGCAATGTGGTTGTATCCTAAGGTTTTGGGTTTTAATCCTTC TGAAAGATGGGGACACTCTGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTCGGGGGCTGTTGTGGGGGGCTACATTTCA GTGATGTTCTGACTTTAGACCTTGAGAGAATGCAATGGAGCAAGCTTGCTACCACTGGTGAAAAGCCAGGCCCAAGAGAT AGCCACAGTGCTGTTCTTGTGGGCCATAAAATGATAGTTTTTGGTGGCACAAATGGGTTCAGGAAGGTGAATGACACTCA CATACTAGATCTTGTCACCAAAGAGTGGATTCATCTTAAATGTGAAGGGACTCCACCTTCTCCAAGGGAGAGTCACACTG CCACTCTTGTTGGTGATGAAAGGCTAGTGATTTTCGGTGGAAGTGGAGAAGGTGAAGCAAACTATTTAAATGACTTGCAT GTTCTGGACCTTGGAACCATGAGGTGGAGCTCTCCTGAGGTTAAAGGTGATTTTCCTGTCCCTAGAGACAGTCACATTGC TCTTGCAATTGGTGACAAGGTTGTTGTGTATGGCGGAGACTCTGGTGATATGTACCATGGTGATGTTAGCATGCTTGATA TGGAAACAATGACTTGGTCAAGGTTGAAAGTTCAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATGCAGCAGTAAATATT GGAAACAAGCTCTACATCATTGGAGGGGTTGGAGATAAATGTTATTGCAATGACATATGGGTCTTTGATATCTTCACTTG TTCATGGACTCAACTTGTTATACCTGGTCAACAACCGCAGGGGCGGTTTTCTCACACAGCTGTTGTTACGGACATGGATA TTGCTATATATGGCGGGTGTGGGGAAGATGAACGTCCTTTGAATGAATTGTTAGTATTGCAGCTTGGAGCAGAGTTTCCA AATGGACGTTACAACATTTCCGGGTGTAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGAACCACACCAGGAGAAGC TGATATAAACTCGAAAATTCCACACATGGGGAATAATGTGGAAGTGTTTGGAAAATGGGGTTCTGAAGTTGCATCCGAAA GAGCACTACCTTATCAATTTAATTCAGGAACTTATCAACAAAAGAGGCGGAAAATTGCTCCTGTGAAGGTGTGGGATGTT GAATCAGAACAAGAAGAACATTCTCTTTCACTCTCTCAACATTCATCTCCATCTCAATCTGATCAAGAACAGACACAAGC TCAAAAGGCCAATGCTTCTGCCATGGATTCTCATCGCGTAAAACTGATCCACAAAATTCCAAGCAATTGGCAGCATGGGA GTGTCTCAAGCTATAAGAGAGTTTTGAAGAACGTCGCGCGAAGAAGTCCACAAGATCTTCATCACCTGGAATATCAACCA ACACAAGAACGCTATCTTCATGTTGATGATGATATAAACCGAGGTCGTCACCAAGCGGCAGAACACAAGCCAATGGCGCG AGGATACGCTCAACAACTGGTTGGAGCTGAAGTTCGAGGGAAAGTAGACGGCGCCTTTGATTCGGGTTTGCTGATGACAG CAACTGTGAATGGAAGAGTTTTCAGAGGAGTGTTGTTTGCACCAGTAGGTGCAGGAGTAAGCTCCACCAGTGTTGAGCCA AATTGTTCTTTACCATGTTTATTTCCCTCCTCCACTCAACCATTGATGAACTCAAATCATGTGGAGAATTTGAGGGGTTT GCGGCAACCGCTACTGGCTCGGCCATCTCCAATCATGAGAGGCTCTGCTGCACCTTTAGCAAATGAACGCAAAGTGAGGA GTGACCTTCAAGGGTTGGTTTTGACACTTGGAGGACCTGCTGCAAGTGGCAACCATGCTTGA
Protein sequence (LotjaGi5g1v0231100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSLVAETEKKKKAMWLYPKVLGFNPSERWGHSACFSGGLMYVFGGCCGGLHFSDVLTLDLERMQWSKLATTGEKPGPRD SHSAVLVGHKMIVFGGTNGFRKVNDTHILDLVTKEWIHLKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLH VLDLGTMRWSSPEVKGDFPVPRDSHIALAIGDKVVVYGGDSGDMYHGDVSMLDMETMTWSRLKVQGSSPGVRAGHAAVNI GNKLYIIGGVGDKCYCNDIWVFDIFTCSWTQLVIPGQQPQGRFSHTAVVTDMDIAIYGGCGEDERPLNELLVLQLGAEFP NGRYNISGCKVFGTYWNQEKRTTPGEADINSKIPHMGNNVEVFGKWGSEVASERALPYQFNSGTYQQKRRKIAPVKVWDV ESEQEEHSLSLSQHSSPSQSDQEQTQAQKANASAMDSHRVKLIHKIPSNWQHGSVSSYKRVLKNVARRSPQDLHHLEYQP TQERYLHVDDDINRGRHQAAEHKPMARGYAQQLVGAEVRGKVDGAFDSGLLMTATVNGRVFRGVLFAPVGAGVSSTSVEP NCSLPCLFPSSTQPLMNSNHVENLRGLRQPLLARPSPIMRGSAAPLANERKVRSDLQGLVLTLGGPAASGNHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 19 | 121 | 103 | 1.1E-18 | ||
| SUPERFAMILY | 21 | 270 | 250 | 6.54E-63 | ||
| PANTHER | 26 | 116 | 91 | 2.1E-79 | – | |
| Pfam | 38 | 85 | 48 | 1.9E-9 | – | |
| SMART | 40 | 89 | 50 | 12.0 | ||
| PANTHER | 113 | 551 | 439 | 2.1E-79 | – | |
| Gene3D | 122 | 341 | 220 | 1.3E-36 | ||
| Pfam | 128 | 170 | 43 | 1.2E-7 | – | |
| SMART | 193 | 242 | 50 | 0.13 | ||
| Pfam | 232 | 279 | 48 | 8.6E-9 | – | |
| SMART | 243 | 292 | 50 | 1.2 | ||
| Pfam | 281 | 314 | 34 | 5.3E-4 | – | |
| MobiDBLite | 404 | 435 | 32 | - | – | |
| MobiDBLite | 409 | 433 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0231100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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