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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0234700 |
| Transcript ID | LotjaGi5g1v0234700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.2; TAIR: AT1G59740.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q93VV5|PTR16_ARATH Protein NRT1/ PTR FAMILY 4.3; TrEMBL-Plants: tr|I1LAX9|I1LAX9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0234700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54277392..54281234) extracted from Lotus japonicus Gifu genome v1.2.
GAAACTGATAAACTAGTGTGCACATTCACCAAGAAAAAGAGAAAGACAGAGCACGATAAATAGCTTTAGAAGACAAACAC AGAACAACAGAACACAACCAAACAGTTTAAGGTAATAAACTAAGCTCCAACCCACTCTCGTCACCATCATCATCATCATT CTTGTCTCAAATCAAACCAAAGCTTCCTGTTCAATCTTCACCATCACCACCATTCTTGTTTGAATTCAGAAACTCACACA GAATGGTAAGTACTCTCAACATTCACAACAAACAACCACCATTTCCTTTTCTCTTTGTCTATGATTTGGTTGACATGTTT CAAATCTGGTCTTGCAGGGAGACAAGGAGGTCAAAGAATGGAAGAGGAAACAGAAAGGTGGATTCAGAGCTTCCATGTTT GTCTTTGGTAAGGAAGTTAACATTCTGGGCATAGATTAAAAAACTGTCTTGACTTGATGAATCTTGATTTTGATTCTGTA TCTTTGTTCTTCAGCATTGTCAGCATTGGACAACATGGGTTTTGTGGCCAACATGGTGAGCTTAGTTCTCTACTTTATAA TGGTGATGCACTTTGATCTGGCCAGCAGTGCCAACACTCTGACAAACTTTATGGGTTCAACTTTCTTGCTCTCTCTTGTT GGTGGTTTCATCTCGGATACCTACTTGAACAGACTCACCACATGTTTGCTCTTTGGATCACTCGAAGTTCTGGTAAGTGC TAAACAATATTTTAGTTTAGAAAAAACAAACTTCAAATCCCAATGTCTTGTCTAATTAGATCAATTTGATTGGTTATTAT AATGTTTCAATCATGTTCTGCTTTTTATCGATCAATTCTGACACCCAGAAGCTACTTTTTGTTCGCGTTTTTTCGCGAAA TTGATTTTGACTTTGGAATCGATTGTACTAGGCTTTGGTAATGCTGACAGTTCAAGCTGGTTTAGATAGTCTACACCCAG AAGCATGTGGCAAGTCAAGCTGTATCAAAGGAGGTATAGCAGTCATGTTGTACACATCACTGGGTTTGTTGGCATTGGGT TTGGGTGGAGTGAGAGGAGCCATGGTTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAGTTGAAGCAAAAGCTCT TGCAACTTTTTTCAATTGGCTTTTGCTTAGTTCAACTCTGGGCTCAGTTGTTGGGGTAACTGGGGTTGTGTGGGTTAACA TGCAAAAGGGTTGGCAATGGGGATTTTCCATAATAACTGTTGCTTCCTCCATTGGTTTTCTGATCCTTGCTCTTGGTAAA CCATTTTACCGCATCAAAGCTCCTGGTGACAGCCCCATTTTGAGGATTGTTCAGGTCAGTGATCTCTAATTAGTCACTCT CAGTTTTAGTTTTTCAGAATCAATTCTAGCACTCAGAAGAAGCGAAGTTACTTGCATAAGTTTCTCCCCAGAATTGATAT TGTATTTAGAATCAATTATGGAATTCCAAACATGTAATCAATGAGCACATACATTTAGTAAAGGTTGTTGAGTTGAAATT TCATTTTTATTTGTTACAGGTTATTGTTGTGGCTTTTAAAAACAGAAATCTACCACTGCCAGAGTCTAATGAGCAACTTT ATGAGGCCTATAAAGATGCTACAGTAGAGAAGATTGCACACACTAACCAGATGAGGTGATTTTACTTTCTTCATGCTCAA AATTAATGCTTAACATGATTGCATATTGCTGTAAAGTAAACCAATCAAGGCTAATAATAATGTTCTGCAAATAATAAGAC TATTGAAAAATACATGGTCCAGCACATTCATGTGTTGAGATTCTTTTTCTTCATGTACGACGGGGTAGGTAATGCCAAGA AATCTGGGCCTACTATCACTCAATCACTTATGCACGTTTGGTGAAGCAGAGATACAGAGAATGATCATGGAAAATGTGTA TTCACCATTCGTAAACAGGGAAAGTAAAGGAAAAAAGAAGTTTTTCTGACAATAACTCAGTGAAAAAAGTCCTTGAAAAA CAGTACTAGGTGCAATCAAACTTCTTTTTTCAGTGTTGGTTTTATTCAGGGTACATTACCAGAGAAAGTAAAAGCAATTT ACTTCTCAATAGCTGCATAGCTGCAATGCAGCTACCTCCACTACCTCCAATGATTCTGTGTATGTTTGAATTATTTTTTT GAACTCAACACACTTATAAGTCAAATGGTAAAATCTTATTTCTCCATTATTGTGTAGTGAGATGGGTTCTCCAAACACAG ATTTGCTTTAATTTCTCTTTTTCTCCTCTATTGAGTTTTTCTTTTGGGTGTTGAGTTGCTGAAATCAAATTAAAAAGCTT AACATAGTAATTGTACAATAATTGATGACCTTATTATGGTTGGGATGACATTTATTCTCCTTTTTACTTTATTTTCCTTT CTAAGCATATATGCATGTTAAAATGTCCTGGTTTTGTTGAATCAGGTTTCTAGATAAAGCTACAATTCTTCAAGAAAACT TTGAACCAAGGCCATGGAAGGTCTGTACTGTGACACAAGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCCATACTA GCCAGCACCATCATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTCAGTCAAGGGAGTGTGATGAGCAAGAA ACTTGGTTCTTTTGAAGTGCCTTCACCATCCATACCTGTTATCCCCCTTTTTTTCTTATGCGTACTGATTCCAATTTACG AATTCATCTTCGTGCCATTCGCGCGGAAGATCACTAACCACCCCTCTGGTGTTACACAGCTTCAAAGAGTTGGTGTGGGG CTGGTACTTTCTTCAATTTCTATGGCAGTAGCTGGGATAATAGAAGTAAAAAGGAGGGACCAAGCAATAAAAGACCCATC AAAGCCAATAAGCCTATTTTGGCTATCCTTCCAATATGCTATATTTGGGGTTGCAGATATGTTCACTCTTATAGGACTCC TAGAATTCTTCTACAGAGAAGCACCTCCAACCATGAAATCACTTTCAACTTCTTTCACATATTTGTCCATGTCTCTTGGT TACTTCTTGAGCACAGTCGTTGTGAGTGTCATTAATACTGTTACCAAGAGGATTACTCCAAGCAAACAAGGATGGTTGTA TGGAAGTGATTTAAACAAAAACAACCTCAACTTGTTCTATTGGTTCTTAGCAATCCTGAGCTGCCTTAATTTTTTCAACT TCCTTTACTGGGCCTCTTGCTACAAATACAAATCTGAAGACAACAGCTGTTCAAAGCTAAATGTGAAGGCTGTAGCTGAA ACTACTGCAATAATGGTTGTTGATGAGAAAAAACATGATAAGGAAGACATGAAGGATCATGGAAGCACCCAAGATCTGAG AGCTAAGGCTAAAGAAAGCAACCAAACCAGTGAAGCCAATACTGAGGGACCCTCTTCCTCTGATGAAACAGATGATGGCA AACAAAAAGAAAGAAACTCTAGGGAATGGAAGGATAGATAAGGTTAGGAGGCTCAAGACATGATTTGATATTAATGAATA GATATATTAAGGAGGGATGTGGAAATAGGTAGTGATCGAAATCTCTCTTATCCTACATGTATGGTTTTGTGTAATTGATT GGTAATGTTGGCCCTGGCACTATATCTGTGTGTCTGTATGTGTGCAAAGTTAAAGGTTTTCTTTTCTTCTTTTAACTTTC TTTATTTTACCACATATGTTGATTCACCTGCACTTTTGTTAATCTAATTGAAGTCAAAGGATCTACACTAAAGTTTGTTG CTAACGTGTATCAGGGTTTGGTCTAAGGTGGTTTAGTAAAAAAATTGAACTATCGTGATGCAGTTTAATCCCAACCATCG GAT
CDS sequence (LotjaGi5g1v0234700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGACAAGGAGGTCAAAGAATGGAAGAGGAAACAGAAAGGTGGATTCAGAGCTTCCATGTTTGTCTTTGCATTGTC AGCATTGGACAACATGGGTTTTGTGGCCAACATGGTGAGCTTAGTTCTCTACTTTATAATGGTGATGCACTTTGATCTGG CCAGCAGTGCCAACACTCTGACAAACTTTATGGGTTCAACTTTCTTGCTCTCTCTTGTTGGTGGTTTCATCTCGGATACC TACTTGAACAGACTCACCACATGTTTGCTCTTTGGATCACTCGAAGTTCTGGCTTTGGTAATGCTGACAGTTCAAGCTGG TTTAGATAGTCTACACCCAGAAGCATGTGGCAAGTCAAGCTGTATCAAAGGAGGTATAGCAGTCATGTTGTACACATCAC TGGGTTTGTTGGCATTGGGTTTGGGTGGAGTGAGAGGAGCCATGGTTGCATTTGGTGCTGACCAATTTGATGAGAAGGAT CCAGTTGAAGCAAAAGCTCTTGCAACTTTTTTCAATTGGCTTTTGCTTAGTTCAACTCTGGGCTCAGTTGTTGGGGTAAC TGGGGTTGTGTGGGTTAACATGCAAAAGGGTTGGCAATGGGGATTTTCCATAATAACTGTTGCTTCCTCCATTGGTTTTC TGATCCTTGCTCTTGGTAAACCATTTTACCGCATCAAAGCTCCTGGTGACAGCCCCATTTTGAGGATTGTTCAGGTTATT GTTGTGGCTTTTAAAAACAGAAATCTACCACTGCCAGAGTCTAATGAGCAACTTTATGAGGCCTATAAAGATGCTACAGT AGAGAAGATTGCACACACTAACCAGATGAGGTTTCTAGATAAAGCTACAATTCTTCAAGAAAACTTTGAACCAAGGCCAT GGAAGGTCTGTACTGTGACACAAGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCCATACTAGCCAGCACCATCATA ATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTCAGTCAAGGGAGTGTGATGAGCAAGAAACTTGGTTCTTTTGA AGTGCCTTCACCATCCATACCTGTTATCCCCCTTTTTTTCTTATGCGTACTGATTCCAATTTACGAATTCATCTTCGTGC CATTCGCGCGGAAGATCACTAACCACCCCTCTGGTGTTACACAGCTTCAAAGAGTTGGTGTGGGGCTGGTACTTTCTTCA ATTTCTATGGCAGTAGCTGGGATAATAGAAGTAAAAAGGAGGGACCAAGCAATAAAAGACCCATCAAAGCCAATAAGCCT ATTTTGGCTATCCTTCCAATATGCTATATTTGGGGTTGCAGATATGTTCACTCTTATAGGACTCCTAGAATTCTTCTACA GAGAAGCACCTCCAACCATGAAATCACTTTCAACTTCTTTCACATATTTGTCCATGTCTCTTGGTTACTTCTTGAGCACA GTCGTTGTGAGTGTCATTAATACTGTTACCAAGAGGATTACTCCAAGCAAACAAGGATGGTTGTATGGAAGTGATTTAAA CAAAAACAACCTCAACTTGTTCTATTGGTTCTTAGCAATCCTGAGCTGCCTTAATTTTTTCAACTTCCTTTACTGGGCCT CTTGCTACAAATACAAATCTGAAGACAACAGCTGTTCAAAGCTAAATGTGAAGGCTGTAGCTGAAACTACTGCAATAATG GTTGTTGATGAGAAAAAACATGATAAGGAAGACATGAAGGATCATGGAAGCACCCAAGATCTGAGAGCTAAGGCTAAAGA AAGCAACCAAACCAGTGAAGCCAATACTGAGGGACCCTCTTCCTCTGATGAAACAGATGATGGCAAACAAAAAGAAAGAA ACTCTAGGGAATGGAAGGATAGATAA
Protein sequence (LotjaGi5g1v0234700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDKEVKEWKRKQKGGFRASMFVFALSALDNMGFVANMVSLVLYFIMVMHFDLASSANTLTNFMGSTFLLSLVGGFISDT YLNRLTTCLLFGSLEVLALVMLTVQAGLDSLHPEACGKSSCIKGGIAVMLYTSLGLLALGLGGVRGAMVAFGADQFDEKD PVEAKALATFFNWLLLSSTLGSVVGVTGVVWVNMQKGWQWGFSIITVASSIGFLILALGKPFYRIKAPGDSPILRIVQVI VVAFKNRNLPLPESNEQLYEAYKDATVEKIAHTNQMRFLDKATILQENFEPRPWKVCTVTQVEEVKILTRMLPILASTII MNTCLAQLQTFSVSQGSVMSKKLGSFEVPSPSIPVIPLFFLCVLIPIYEFIFVPFARKITNHPSGVTQLQRVGVGLVLSS ISMAVAGIIEVKRRDQAIKDPSKPISLFWLSFQYAIFGVADMFTLIGLLEFFYREAPPTMKSLSTSFTYLSMSLGYFLST VVVSVINTVTKRITPSKQGWLYGSDLNKNNLNLFYWFLAILSCLNFFNFLYWASCYKYKSEDNSCSKLNVKAVAETTAIM VVDEKKHDKEDMKDHGSTQDLRAKAKESNQTSEANTEGPSSSDETDDGKQKERNSREWKDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Gene3D | 2 | 545 | 544 | 7.4E-157 | – | |
| PANTHER | 9 | 559 | 551 | 0.0 | – | |
| PANTHER | 9 | 559 | 551 | 0.0 | ||
| SUPERFAMILY | 10 | 533 | 524 | 6.1E-17 | ||
| CDD | 18 | 534 | 517 | 6.91154E-160 | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 21 | 47 | 27 | - | – | |
| Phobius | 48 | 58 | 11 | - | – | |
| TMHMM | 56 | 78 | 23 | - | – | |
| Phobius | 59 | 77 | 19 | - | – | |
| Phobius | 78 | 88 | 11 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Pfam | 87 | 500 | 414 | 5.9E-83 | ||
| Phobius | 89 | 108 | 20 | - | – | |
| Phobius | 109 | 127 | 19 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 128 | 151 | 24 | - | – | |
| Phobius | 152 | 170 | 19 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 171 | 192 | 22 | - | – | |
| Phobius | 193 | 197 | 5 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 198 | 218 | 21 | - | – | |
| Phobius | 219 | 310 | 92 | - | – | |
| TMHMM | 311 | 333 | 23 | - | – | |
| Phobius | 311 | 332 | 22 | - | – | |
| Phobius | 333 | 351 | 19 | - | – | |
| Phobius | 352 | 371 | 20 | - | – | |
| TMHMM | 353 | 375 | 23 | - | – | |
| Phobius | 372 | 391 | 20 | - | – | |
| Phobius | 392 | 411 | 20 | - | – | |
| TMHMM | 392 | 411 | 20 | - | – | |
| Phobius | 412 | 430 | 19 | - | – | |
| Phobius | 431 | 453 | 23 | - | – | |
| TMHMM | 431 | 453 | 23 | - | – | |
| Phobius | 454 | 473 | 20 | - | – | |
| TMHMM | 466 | 488 | 23 | - | – | |
| Phobius | 474 | 493 | 20 | - | – | |
| Phobius | 494 | 512 | 19 | - | – | |
| Phobius | 513 | 533 | 21 | - | – | |
| TMHMM | 513 | 535 | 23 | - | – | |
| Phobius | 534 | 621 | 88 | - | – | |
| MobiDBLite | 565 | 582 | 18 | - | – | |
| MobiDBLite | 565 | 621 | 57 | - | – | |
| MobiDBLite | 583 | 601 | 19 | - | – | |
| MobiDBLite | 602 | 621 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0234700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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