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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0236600 |
| Transcript ID | LotjaGi5g1v0236600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Atypical kinase COQ8A, mitochondrial; TAIR: AT4G01660.1 ABC transporter 1; Swiss-Prot: sp|Q9SBB2|ABC1_ARATH Protein ABC transporter 1, mitochondrial; TrEMBL-Plants: tr|K7K5T4|K7K5T4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0236600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54440502..54447601) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTCTTGGTGTTCCTAGTTTGATGGAAGCAACAGAGGCCACGTTAGTATTGGTTTTCAGACACATGAATGAATCTCAA ACCAACCACCAAAAATTGCACCTCTACCTACATCGCCGGTAATCAAAACACAACTTGAACAAGAACAAGAAGAAGCATTG ATATATAGTTTCTGACATTTGACTTAACCGCCACAATTTCACTTCCATGGCATCATTGAAGGATCTCACCAGGCTCTTCA ATGGCGTCTCCTTAATCGCCAACGAATTCGCCAAGCGCTCTTTACCCGCCACAACCGGAGATTTCCAAACCCTAATCAAA CGCGCTCTTCTCTCCGCCACCAAAGGAAAACCTCGCCAATTCTCCCACCCCGCCGCCGTATCCTCCTCCTCCGATTCCAC ACTCGCTTCTTCTCCGACTACTACTACTACTGATTCCGTTGTTTACTTCTCCGATTCAACACCACCACCACCACCAGTAC CGCCACCACCAACAGCAGTAACAAACAATGGCGATGTTGCTGCTGATTCTTCCCCTGAAGCAAACCAGCCGGAAACTTCT AATGCAAGTGTTTCTGCTGTGGAGACGAAGGAAACTGAAGCTGTGAGCACTTCTGAAACGCCGCCACCGCCGACGTTGAC GAAACGGAAGCCCCGGGAGAGGAAGGTTCCTGCAACTCCATTTTCTAGGGCTCTTGGGTTAGTGTTTTGTTAATTATGAT GAATTGAGTTCTAATTGAAGTTGAATGAATGCATAGAGTGTGTTATGTTGTTGTTGTGATTGTTGAATTGTAGGTTTGCT GGGCTAGGTGCTGGTCTTGCTTGGGGGACAGTTCAGGAATCTGTGAAGAGGCTTGCATTTGGTACACCTACAAATCAAGG CAACCAATCTGCACTTTCCCCGTTTCTATCTGAAAAAAATGCCGAACGTTTGGCTCTTGCACTTTGCAGAATGCGTGGAG CAGCGCTTAAGATCGGCCAGATGTTGAGCATACAGGATGAATCTCTTGTTCCTCCACCGGTACTGTCACGTGTCTTTCAT GCTTGTGGCTTTATTGATATGGAAAATAAACCTCCTTTGAAGTGAGATTGTTTTTATATCGACACGTGAGGAGAGCATAT TTACCCTTGAATTTTAGTGAGTTAAGATGATAGTTGACTTTAAATTAGATGAAGGTGGATACTTTGTTACTTACTCACTT CTTAGAGCATTTAATTTTAGGCTAGCCTTTTTGCAATTGCTATGATGCACATGTATTTATCGTGAATATGCATGTTGTTT AAGAAGAGGCATGATAGTTAGTAGAATTGCAAGCTGATGCTGTGCACTTTGGCTGAAGCTGAGATACTATGGGTATGTTT AATTAAATTGAACCCCATTGAACCCCCCTGCTGAATTTGTAGTGAAAAATTAAAAGCTGAAATTTTTTTTTTGGGTAGAA AACAGTGAATTTTAATTGCTTAAAATGTATGAAAGGAGGCAACTACTGATTATATATAATCAATGGTGTATTAAAGGATA TTATTTTCTTTCAATTGTATAGGTAAGTAAGCAAAGAGATGCTGCTCAATACTGTTTTAGTGATCTCTCACGTTCTTAAT TTTTGTAGTTCTTTTTTATTTTACCCTTCAGCTTTACCTTATAGTAAACAAACACCACTGAATCATTCACTCAATTGAAC TTAAATCAATAAATAAATAAGCTAAAAGTCTGTTTTCAGTAGAGTGTAATTGTATTTAATGTACATGAACCTATATTAAA TGTTAATCAACTATAAGACATTCATCCTTCTCTCAAATGACTTAAAATGTAAACTGTCAATCCTTCATCTGTAGATACTG GCTGCATTAGAAATTGTCCGTCAAGGTGCAGATGTAATGCCAAAGAGCCAGCTCAATCAAGTCTTGAATGCTGAGTTAGG TCCTGATTGGTCATCAAAATTGATTAGTTTTGATTATGAACCTTTAGCTTCTGCAAGTATTGGCCAGGTATGTATGCTAG TTTGCTTTTTGCTTCAAATCTATCATTTGCTGGTTTTGAGCGCTAAAGTTCTGTGGTTGTCACCATTTTCCATCATTTCA TCTTTCCATTTGGCTTTAGTTATTTTATGAGTAATTTCAAATAATTCAAAGTTTCATCTGTTCACCCCCCCGCCTTTTTG TTACTTTACTTTTGGATTTCAAGGAGTCATTTTTTGATGTTAAGTATATTTATTATTACTAATAATTAATATGAATTAAC ATAATAGTTTAAATTCCTTAACCCTTGTGCTTTTGGAGCATAACCTTTTCCCTAAAAGAACATTAAATGTTTATCATGAG TCAAATCAAATATAGTCTTACTTTTTACTCCCTATAGATGACTAGATGTGCATAAAAAGCCACTCATGAGTCTTCATTTG ACAACTTAAGATTTTAGTAGAGTTAGTCCTTGATACGATGTTAAAGCCTCCTCTGTGGCTAAATGGTTATAAGTTTGATC ATTACTATCCTTATTTTTGTAAGTAAAAAGTTAAATTCCATCACTAGATAGGTAGATTTGTAGTTATCTATGCTTTAAAC CCAAATATTGTGCGAGCATATTAGGGATATATAAAAATCATTCACAGGCCTTTACCTTACAACATCAGCTAGGTGACTTT TGAACTATCTAATTCACTTTGTTTTCATATTAACACAAAAGTCATTCTTATAAGAATGCCAAACCTTACCATACTTCTTT TTCTTATGCATGTGTTCTTAAGTTCCATATAGTTCCAAGCAAGACAGTTTACATTGTCCCAACAGCAATATCATGCAACT TTATGTTATAGCACTTGTGCTTATTATAATATTATATCTTAACTAGGTTCCTCATATGAAATTTAGGTGCACCGAGCTGT CATGAAGGATGGCACGCAAGTTGCGATGAAAATTCAATACCCTGGTGTTGCAGATAGCATTGAGAGTGACATTGAGAATG TGAAACTTCTTTTAAACTACACAAATCTAATTCCCGAAGGACTTTATCTTGATAGAGCTATAAAGGTGCATATTTATTTA TAAATTCATATATACTTTCATTTTGTTTATATCAATATTCTTATTTCATAATCTTTAATCATGCAAAATTTATATCTCTT TCCCCTCTCTTCCTTTCTCTGAGTGATTTGCCTTCTAAGTTATCTGTTAGATCCTAAAGCCATATTCAATTTATAATAAT TCTTAGAATTTGGATTAGGCTCTTAGATTTTGGGTTAGGTCTAGCTCTACCCCAAAAGCTAGCGTATGGGTGAGGATTGC TCTATGCCTCTTCCCTTCATAAGAATTTATTTTCCCATATCTCTAGTCAATGTGAGACTTATCAACACACCTCCTCACAC TCAAGGATGAACATATGGAGTGTTGAATTTGCAGGAATGGACATTTACAAGTGGCCTAATAAATGGATCTAGGATAGGCT CTGATACCGTCTTAGAATTTGGGTTTGGCCTCTTAGAATTCTAGCTAAGCCATACCCCAAAAGCGCTTAGGGGTGAGGGT TGCAGTACCCTGTATAAGTAAAGAATAATTTTTTTATATGCATACAGAATTGTGTCACTGATACAAACCTGGAAAAAAAT TAGGTAAAAGTAAAGATGATTTTTATTGATTGAATGAAAATGAACGAAAACAAGGACAAAGTGTTCTCCAAGGGTTTCCA CTTTCCTCTTCAAAAAGGTTTCCTCTTTCTTACAACTGCTTTTGATTCTCTCCAAATACAATTTCCTGAATGTCCTTTAT CTGCCTCTAACTAACTACCACAGCTACTTTGACTTTCCTTTATTCTACCCTTTTATCCTATCAGCAATCTACTTTCCTCT GCACCTATTAAACAATCCATCTAATCCATGTACTCTGTTGCTAATTGGATTTTGCAGGATGATATTTATCTATGCAGGAA TTGCTCTATAGTCCCTTACCTATCATATAAAAAGATCTTTTCTCCATAATTTGAAAAATAGATCTGTCCATATGTTATAA TATGTGCCATAACTTTTTTCCTGTATTTTACCTAGGTTGCCAAAGAAGAATTATCTCGTGAGTGTGATTACAATTTGGAG GCAGCAAATCAGAAGCGATTCCGAGATCTTCTTTCTGGCGTAGAAGGATTTTATGTTCCAGTAGTTGTGGATGACATTTC GAGCAAAAGAGTATTAACTTCGGAACTTGTTCACGGTAATTTTAATAAATTTCACCAGTTCTTGCTATGTCTTAAGTGAT TCAAAAGAACAAAAAGATATAAGATATTTGCTACTGAAGCAGATGCACTTGAGAGACTGTTTAAATGGTAAAGCTCTCAA TACAAATATTATTTGAGTGGAAGATATAGTTTTCCAAATTCAATAAAAAATCCTGTAAATATTCCCAGTTTTATAACCAT TCATGAAATTTCTGGATATCAAACTAGCACTTCCTTGAAATTGTTGAATAGCAAAGCTGATTTAATTTTAGTACATATTA ATGTCTAATTGTCAGAGATGTTTTAGAAATGCTTTCACCCCTAATGAGATAATTTTATGATGAAACGAAGTTTATCCATA ATATGCTTTTATTTGGTCCTTGCACAAGTATTTCTGAGCTTTCAGTGAGAATGATGCTAATTTGTTCTGTTCAAGAGATG CTTTCTTTTATAATTTTTATCACTCAGTAGGGAAAAAAGAATACGTAGAAAATAACTCTGATTGTTTTTCAATTAAATAA ATAATATATTTTTCATTTGTTAGATTAAATATATAAAATGATGTTCTATTAACAAATTATATTGTGTTCTGTTTTTAGCT TTTTTGCTAACATGGATGGTTTTCTCTTGCTACAGGAGTTCCAATTGACAAAGTGGCATTGCTGGACCAGGAAACTCGTA ATTATATTGGGAAAAAGTTATTAGAACTCACACTATCAGAGTTATTCGTATTCCAATTTATGCAGGCATGTTATTGCACA CTCTGTTTATATATGTCCACATGTTAAGTATTAAATACCGTTGTTGGCACACTGATTAAAGCATCATTAATCAGAGAAGT ATGGCCCAAGCAAAGAAAATTTGATGCTGGTTTATGAATGATGATTTTTCATGTTGTTTAAGACATATATCACTGTTGAA AAACTTGAGTGAAGTGCAGCAAAAGATTAGGTTTGAGTGAGACACTGTAACGAGCAAGGTTGATATGTTGTGGTGAATTA ACTCGAGCTGTTGGAGAGTTACCAATCCTGATAATATGATAGCCTAAGTTAAAGTACCACTTTGCAAGAACTGACTGAAT CAGTTGACATGACATTATGGTAGAGTCAACTTCTGGCCATGGTAGCTGTACTTTCTGAGCGTTTGAGTCTAATTCATATA TTATCATCTCCCCCCTATTACTGAGTATCTAAAGGGGTAAACACCATGAGGTCATAGTTATTCTAACAGCTATGCACTTC AGGTTCATGAATTTCACTTTCTGCTGTGTTTTGTTGCTTCATATTTTTCAACGTTAACATGGCGTTTCCTTCAAATCACA CACGGTCAACTCTGATTTTCTGGTCTTTTCTAACCTAGCAGCTGTTCTTTAATGCAGACTGATCCTAATTGGGGCAATTT CTTATACAATGAAGCTACAAAGACAATTAATCTTATTGATTTTGGAGCAGCACGGGATTATTCAAAAAGATTTGTTGATG ATTATTTAAGAATGGTTGGTCCTCTTCCTTTTTAATCTTTTCATATGAATAACTAAGCTGAGGTTTGAATTATTGATTTG CTTTATTGTTTTCTCTATTTAAATTTTATGCTACTGAGATTTGGGTATATCAAGATAGATAGCGAAAGATGTCATTCTTG ACTACTTTTTTTCCCTTCAAAATATTTTCTTATACTGGAATGAAATTCACACTAATCTGTCTATATCTTGACACAATATA GCCATACTCTGGTTTGAAGATTGCTTTATAAGGTAAATTGTTGGCTTAACTGAAGTTGATATATATAGAAGCAGAACATG GTTAAAGATTATGTTGTGGTCCTGTATGGAATTATCTAAATTTTAAAGAATATACGAAAGGAGTATTAAATTGTCCCTTA TTAGTCATGTGATGGTGATAACTAAGGTGATCGTTCAGTTGTTTTAATTAATATTGTACACAGGCTCAATTCCAGTACCT CTTTTCATTAATTTAAAGTTTTCTGGTATGTTCTCATGTCATGGAGCAATTCTTGCATGTGCACCAAGTCTATTAGACAT AACCACTTAAAAGCTCAAAATACATTAAGAAAATATTTTAATATTATCCTAAGTTTTTAATTGGTCGTACCCAATAGGTT CTTGCTTATCAAGAGTTATTCCATGTTATGACTTTGACTGCTTGTGCTTTCTGCTTCAACGTGGGGGATGGTTAGAGCTG CTTGGATTTTTACCCTCTTCTTAAGATTAGATGAGCTGCAAAATCCTTGAAACTCTTACTGTTTTTAAATTTTGTGTATG AATTGGTTAGGTTCTGGCATGTTCAAATAAGGATAGTGATGGAGTCATTGAGATGTCCAAGAGACTTGGGTTTATCACTG GAATGGAATCAGATGTGATGCTTGATGCCCACGTCCAAGCCGGTTTTATAGTTGGTTTGCCATTCTCAAACCCTGGTGGA TTCGACTTCCGAGCAAACAACATTACTCAAAGCCTTTCTCACCTCGGAGCGACAATGCTGAAGCACAGACTCACTCCTCC ACCTGATGAAGCCTACAGTCTACACAGAAAGCTTTCCGGTGCTTTTTTGGCATGCATTAAGATTGGGGCTGTTGTCCCTT GTAGGGAACTGTTGCTTGAAGTGTATAAGCATCATAAATTTGGTGAAGTAAATGAGACATTATCCAGTGGCTCGGTGTCT GCATTGGCTAATTAAATTTTGCCCACTAAATTTTGCCAATTATGATTATATGCTGGATGCTTGTTTGCGTCCAAGCTCCT TAGCATAAATATTTAATTTGCTCCATAAATGGAGTCTATTATGGGGACAATTCCCCGCTCCCCATTTGTAACTGTAGTTT TTCCCAGATTGATTCTTTTAAAGGTGATTGATTCTATAAAATAATGTGTTTTGATGTTTA
CDS sequence (LotjaGi5g1v0236600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATTGAAGGATCTCACCAGGCTCTTCAATGGCGTCTCCTTAATCGCCAACGAATTCGCCAAGCGCTCTTTACC CGCCACAACCGGAGATTTCCAAACCCTAATCAAACGCGCTCTTCTCTCCGCCACCAAAGGAAAACCTCGCCAATTCTCCC ACCCCGCCGCCGTATCCTCCTCCTCCGATTCCACACTCGCTTCTTCTCCGACTACTACTACTACTGATTCCGTTGTTTAC TTCTCCGATTCAACACCACCACCACCACCAGTACCGCCACCACCAACAGCAGTAACAAACAATGGCGATGTTGCTGCTGA TTCTTCCCCTGAAGCAAACCAGCCGGAAACTTCTAATGCAAGTGTTTCTGCTGTGGAGACGAAGGAAACTGAAGCTGTGA GCACTTCTGAAACGCCGCCACCGCCGACGTTGACGAAACGGAAGCCCCGGGAGAGGAAGGTTCCTGCAACTCCATTTTCT AGGGCTCTTGGGTTTGCTGGGCTAGGTGCTGGTCTTGCTTGGGGGACAGTTCAGGAATCTGTGAAGAGGCTTGCATTTGG TACACCTACAAATCAAGGCAACCAATCTGCACTTTCCCCGTTTCTATCTGAAAAAAATGCCGAACGTTTGGCTCTTGCAC TTTGCAGAATGCGTGGAGCAGCGCTTAAGATCGGCCAGATGTTGAGCATACAGGATGAATCTCTTGTTCCTCCACCGATA CTGGCTGCATTAGAAATTGTCCGTCAAGGTGCAGATGTAATGCCAAAGAGCCAGCTCAATCAAGTCTTGAATGCTGAGTT AGGTCCTGATTGGTCATCAAAATTGATTAGTTTTGATTATGAACCTTTAGCTTCTGCAAGTATTGGCCAGGTGCACCGAG CTGTCATGAAGGATGGCACGCAAGTTGCGATGAAAATTCAATACCCTGGTGTTGCAGATAGCATTGAGAGTGACATTGAG AATGTGAAACTTCTTTTAAACTACACAAATCTAATTCCCGAAGGACTTTATCTTGATAGAGCTATAAAGGTTGCCAAAGA AGAATTATCTCGTGAGTGTGATTACAATTTGGAGGCAGCAAATCAGAAGCGATTCCGAGATCTTCTTTCTGGCGTAGAAG GATTTTATGTTCCAGTAGTTGTGGATGACATTTCGAGCAAAAGAGTATTAACTTCGGAACTTGTTCACGGAGTTCCAATT GACAAAGTGGCATTGCTGGACCAGGAAACTCGTAATTATATTGGGAAAAAGTTATTAGAACTCACACTATCAGAGTTATT CGTATTCCAATTTATGCAGACTGATCCTAATTGGGGCAATTTCTTATACAATGAAGCTACAAAGACAATTAATCTTATTG ATTTTGGAGCAGCACGGGATTATTCAAAAAGATTTGTTGATGATTATTTAAGAATGGTTCTGGCATGTTCAAATAAGGAT AGTGATGGAGTCATTGAGATGTCCAAGAGACTTGGGTTTATCACTGGAATGGAATCAGATGTGATGCTTGATGCCCACGT CCAAGCCGGTTTTATAGTTGGTTTGCCATTCTCAAACCCTGGTGGATTCGACTTCCGAGCAAACAACATTACTCAAAGCC TTTCTCACCTCGGAGCGACAATGCTGAAGCACAGACTCACTCCTCCACCTGATGAAGCCTACAGTCTACACAGAAAGCTT TCCGGTGCTTTTTTGGCATGCATTAAGATTGGGGCTGTTGTCCCTTGTAGGGAACTGTTGCTTGAAGTGTATAAGCATCA TAAATTTGGTGAAGTAAATGAGACATTATCCAGTGGCTCGGTGTCTGCATTGGCTAATTAA
Protein sequence (LotjaGi5g1v0236600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLKDLTRLFNGVSLIANEFAKRSLPATTGDFQTLIKRALLSATKGKPRQFSHPAAVSSSSDSTLASSPTTTTTDSVVY FSDSTPPPPPVPPPPTAVTNNGDVAADSSPEANQPETSNASVSAVETKETEAVSTSETPPPPTLTKRKPRERKVPATPFS RALGFAGLGAGLAWGTVQESVKRLAFGTPTNQGNQSALSPFLSEKNAERLALALCRMRGAALKIGQMLSIQDESLVPPPI LAALEIVRQGADVMPKSQLNQVLNAELGPDWSSKLISFDYEPLASASIGQVHRAVMKDGTQVAMKIQYPGVADSIESDIE NVKLLLNYTNLIPEGLYLDRAIKVAKEELSRECDYNLEAANQKRFRDLLSGVEGFYVPVVVDDISSKRVLTSELVHGVPI DKVALLDQETRNYIGKKLLELTLSELFVFQFMQTDPNWGNFLYNEATKTINLIDFGAARDYSKRFVDDYLRMVLACSNKD SDGVIEMSKRLGFITGMESDVMLDAHVQAGFIVGLPFSNPGGFDFRANNITQSLSHLGATMLKHRLTPPPDEAYSLHRKL SGAFLACIKIGAVVPCRELLLEVYKHHKFGEVNETLSSGSVSALAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 45 | 153 | 109 | - | – | |
| MobiDBLite | 54 | 82 | 29 | - | – | |
| PANTHER | 57 | 586 | 530 | 7.7E-237 | – | |
| PANTHER | 57 | 586 | 530 | 7.7E-237 | ||
| MobiDBLite | 83 | 97 | 15 | - | – | |
| MobiDBLite | 101 | 141 | 41 | - | – | |
| CDD | 242 | 492 | 251 | 1.13309E-142 | ||
| SUPERFAMILY | 265 | 482 | 218 | 8.23E-17 | ||
| Pfam | 266 | 380 | 115 | 4.5E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0236600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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