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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0238900 |
| Transcript ID | LotjaGi5g1v0238900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT2G01320.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9ZU35|AB7G_ARATH ABC transporter G family member 7; TrEMBL-Plants: tr|I1LEM3|I1LEM3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0238900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54696810..54703137) extracted from Lotus japonicus Gifu genome v1.2.
CCGAACCCATTTAACTCGGGTTTTCACCCAAGAAATCGGGTCGGGTCGGGTGCCCATGGGTTCGGGCTTCTCTGCCAAGT GATATTTAATTTAGATAAGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATG TGAACTGCTCGCAAGCCCATCGGTTATATTTGCTGATGAACCCACAACAGGTAAGCATGCACTTTGGAATTTGCTTTGCA GTGGATTTGAAGTTTGCTTACTTTGTAGGATGATGTAACAATAAAAGAACTTTGCGCTGAAGTGTATTCCTGCCTTCCTG GTTTACATTCTAAAATAAGAAAATAGCAATGTCTGAAATTTCAATATGCATGTTTAGCTTCAGATGCTTTCTGACGATTA CCACTGATATTAGCGGTATAGGAATTTCAATTTCAACATGCTCCCATGGTGGATATCTGTTAGGAAACCAAAAAAGAATG ATCTTATTTCTCGACTGAAAATGAACAGAACAAGGAGAAAGATAAATGTATAAGTGAAGGGGTTTCCTCTTTCTCAACTG AGCTTTGCTTGCTCTCTCAATACAATTCCCTTAATGATCCCCCACCCTTGCTTCCCCCTATTTATATATCTTACTAATCC CTCCTGACTCTATGTTCTAAATTTCTAATTGCCTATATTAACTAACCCCTTACTGTCCCCTTTATTCTTTCAAGCGACTA CCATTCTTTCTAAACAGTATCCTCTAATCACTCTGGGGCTGCTAAGATTTCGGGTTGCTTCTTAAAAAGGAAAAGAAGTC TACTTTGTTGCCTTGCTGCTTGTTCAGCATTGGCTTTATCATATTTAAACCCTGTCCTATAGGATTGTACTCATGGTTTA ACCTGTTTTGCTGGGCTTCAAGCTAATGAAAGTTCTCGAATCTTGTAATTCTATCTTGGTTTGAGGGATATGATATGTAT CTGATGACCTGGGTATGTCTACAATTTTACACAGATGTTATCTTGGTTGCTCACACCATTTTAACCATTTATCAGAAAAT AAGTTCAATTTATCATTTAAGGTTCAGATAGTCTGAATTACTTATCAAGTTAATGGAGTATCTGAATAGTAATAACTTCA TTTTAAAGTAGGCTAAGTGCAAGAAACCCCATTCAACTTACAAGTGAATTTCAGAAAACTATCTTGTGGTTACAGCTCGT CTTCTCCAACTTATGACTGTTCATATCAACTCCTTACATGGCATCTTTCGTACATGCACAAGGGGTTAGCTTCACATTAA GTTTTCACCCTTTGGTAGGTTTAGGTAGTTGAGTTTTTATGTGTTGAACCACAAGGGCTTTTTATGATGCTGACCTATAG CTAGAGGGAGGTTGTTCCCATTTTGGCTTATAAAATATACAGCGGAATAATGTGCATTGTCCTGTCTGCCTTTGATGATT TTTCTGTTAAGAACTCTTGTTTTCATTTTAATTTTGAGGTTATAATGTGTGAATGGAATTTCCCAGCTAGTAGCTGCTAC CAGATGCGGTTATTTTGTACATACATTTATAACATCTTCCTCTCTCCCCCTCCTCCCACTTACTTTGTCATAAAGTTACT TTCAGGACTTGATGCGTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTT GCTCTATACATCAGCCGAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTAT GCTGGTCCTGCTCGTGACGAACCATTGACATACTTCTCAAAATTCGGGTAATTGGCTATACCTTATTTATGTCACGCCAT CATACATTTTTCACATTGGGAATTCTCTCAGTGTTTTATTATTTAAGAAACTGAGGCTGAGTTAACTTATTTATTAATTG ATTCATTTTATTGTAACTAATTATTTATAATAACACGATAACACAGACTTTTCTGTCTATTATTTGAGAATCTTACTTTG AAACATAAACTTTTAGAAAAGCCAATGAATCCAGATTATAAAAGCTTGTCAGAATTTCAAATTTAATCTTTACATTTAAT TTATCATTTTATCAACTCTTTAATTAGTTGATATTGATAGCAACATTGTGGTAAGTGATAATCCTTGGAGTAACATCATG CATCTATAGTTATTCCACTTATTTACTTTTTAATCAAACCGTATTACGAATGAAGCTTTTATGCCACATGTCAAAGAATT TTTATAGTAAAGTCATAATTTGAATAGATGCACTTCTAACTCTCTTCACTGTGTTCTAAACTTCATATTTGACTAATACC CAATTTTTACGCAGTTGATAGATATTTCTGTTTTGGCTTCAATTTGAGATGGCAATTGATAAAAAAATTTATGAATTAGT CTTGAATTTTTCATCATTGTTTTTTTTTTTTCAAGTTAAAGGACGATATGTATTCATATTTCATCCGATCAACCAAAAAA GCCTAGTCTCTTTCTTTGTATGGTTTGTTTGTTGTTAAAATCTCAACAGATGTAAGAAATAATGCATTGAAATGATAATC TTGTTTAACTTATATCTATCACTTTTGGACCAGTAGTTCTGAACAATTGGTTGATGATTGTCGATGAAACAGGTACCACT GCCCGGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGACAGTGTCTATTCA TCTCGAAAAAGGATTGATGGGCTTGTTGAGTCATTCTCACAAAGACTATCTACAGTAATATATGCAACACCAATTACTAT AGATGATATCTCAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAGGTGGTTGGTGGAAGCAATTTT GGTTGCTCCTTAAACGAGCATGGATGCAGGTCTTTCCTTTTAATTTCATCTTTTTTTTGTACTCGTCAAATGGCAGGACC TAGATAAATTGCATGATAGGACCTGTATTTAGTTTTCCTTCTTTCCCATGAACACATTTGATGTGCCTTACTTAAAGACT TCGGAACTTGATCAAGTCATCTGGCAAGACATAATCACAAAATTTGCATTATTTCTTGCTTTTATGTTGTGAAGTTAAAT TATTTATTTTCTCAATTGTGAATTACACGGCAGAGAGAAGTATATATAATACGCGTCATTAATATAAGATCCTTAGTTTC TCTAATTACGGTAATTATAAAATAATACACAACACATAATCAGCCCATACTTATCCTATTTTCATTTTTCTAACAAACCA TATGACCTATATATTTTCTAGTTTTGGAGCATAAAAAAGGATAATTTATTTCTTGCACACAGGGTAAGGAGAATGGAATT TATTTCTCATCTATTTGACTCATAGTTCTCTGGATGACTAGGCTTCACGTGATGCTCCTACCAACAAAGTTCGGGCAAGG ATGTCAATTGCATCAGCAATTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTTCAATACAAGACAGAAT GGGATTGCTTCAGGTTTGCGATGTTCTTGATTCCTGCATGCTTGTTTTTCATATTGACCTGCTGCTAACATGCATTGGAG AACCACTTTGATTTTTGGCAAGACACATGATTTGCTTATTAACCTAAAGTAAAACTTAATATTATGATAACCACCAACTA ATTGGGCTTGGCTAGTGTTATATTAAATCTAGTACACTTGACTTGACTACATGAGCTCCATCTTTTATTTAATTATGCTG ACGAATGCTTTGAAATGCTTTGAAGTTTAAACTCAAATCTTGTTTTGTTATTAAAATGAAAGTCTCACTTGGCTAAGTTT GCTTTCTTGAATTACATGGACTGTACTCAGGTTGCTGCAATTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGT GTTTCCGAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAAC TGTTGGCCGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCT ACATTGATGAGGTCAGTTTCCTATCTTGGCCCCTAGGAGCTTTAGTTTCAATCATATTTCAATTTCTTTTCATTTTATTT TGCTCTTTTTTGTCAGTAGATCAAAATCTTATGTAATGCTTCATACAATGAAAATGGCCATGAAATGTGCATGATTTTCT ATTTTCCTCATAATCCATAAATGCCTTTATTTTATTTTCAAAGATTATTTATATTGGCAAATCCCAATGGCCACAGGGGT ATACATATCCATAGCCATAGGTGATGAATCATGAATGAATGTTCTGTAGAAAAAGAAATAATAAACTAAATATTTTTTGT TTTTCTCTTGATCTGTTTTGCCTCCATTCTAAAAACAAGAAAAAGTGAAATGGAAAGTGGGAAAAAGTTCATTCCCCATG TTATTATCTTGTCACTCCTTACTTTCTACCTTTGCTCTTGAGATCTTCTATTTAATTCTTTCAATCTCATATTATAACTA ATTAGTTTTAAATTGTAGATTTGGAAAATTCTGTGGAATTGTCACTATGGAATCTTTTGCGGCATCTGCGATGGGTCTTA CTGTTGGAGCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATTGTTTTTGGA GGCTACTATGTTAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGTAAGCACA ATTCTGATTTGAGTAAGAGTTGTTAACTTCAACTGTATAGGTCAAACAGAAGTTTAGTTGAGCTAAACATCCATGTAAAG TTTGATATATGTTTCTCTTGCTCTGATACTAATGACTACCATATTGATTTATGCATTCTTTCAGGGCCTTTCAGGGACTT TGCATTAATGAATTTAGAGGTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACAGGAGAACAGGTGAGGGGAGA GAGACAAATATTCTACCTCAATTTAGAACTATTGTCAAGTTCAATAGAATTGAATAAAAACAACATATCTTATGACTAGT GCACTCCAAAACCAAAGGGAAATTTTATCTTTTCTTTTTCTAATATAAAAACGCTTACAAAGGGAAGAACCAAGCCAGAA AACATGATTGCTTTTGGGTATGATAAGGATGTATAAATGAGGGAGGAAAAAACAACTAACCCTATTAGCTGGCCTGATTG AATAGACTAATCACCATCAGTTTTTACCGAAATGGTTTTGTTCCTTGAGCAGTAATGGTTTCTAACTCCTTCATATAAGC GCTAAATTTAGAACATTAACATGGACTAATAATTTGCCATTGTTCAACCATTTCTTTAAGTTGAAATTGTGATACTGTCA TAGTTTATTGGATATCTATTTAAGTAGAAGAGATAGTAATTAAACATAATACCTATCTGGTTTTCTACTGTCACATACGT GGAAAAAGTAGTAGTTTATCTGCATGTGGTTTCTTGAATGCTGATGTGTTTCCCTTTCTTATCCCCTTCCCTCATTCACA GGCACTCGAGCGAATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCACAAAATAGAATACTGTTGTTTTGGT ATTGCACCACCTACCTTCTCCTGGAGAAAAATAAGCCCAAATACCAGCAACTTGAAACACCCCCTCTTGACCATGAAAGA CCACATTTAGAACTGGAGGAGTTCGATTCTGAACAACCTGACCAGACACCTGAAGCTCCACCCGTTAACCAAGTTGATTC CAATCAGCCCCTTGAGTCACCTGATGTAGATCCTGTTGGCCCTTTTATGCTAGAAGGTTTGTAATCAGCTGGGCATTACT CCTGTTCTTCTCAGACATTCATCTATTTATTGATTTATCTGATACAGGTGCTAAGTAGATATCTTTGCAAAGGATCATCT GCAATTACTGAGACAGTAAGCCGTTTCCTATAGAACAGGACCACAATCACGATGTCATTATTCGACATCCAAAACATCAG CTTGTACTTGTCACTAATAAAAAACAGTGACTGGATAATTTTAGGCTGTATCATGGACATGGTGGTTCATTTGATTATAG CAGCTATTTTCATGCGGAAATCATCCTCATTCTTGATTGCTTTTTCCTTGAGATGACTCATCCCCTAATTGTATGTTCAT GGCTCTATTTTTTGGCCTCATGGTTTTAACTTGTCACCATTAACTTGGGTTGGTTTTTCTTTTTTAATTTTGCATTTTAG TCTCTACA
CDS sequence (LotjaGi5g1v0238900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATGTGAACTGCTCGCAAGCCCATCGGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCGTTCCAGGCTGA GAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCGAGAGGTTCAG TGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGACGAACCATTG ACATACTTCTCAAAATTCGGGTACCACTGCCCGGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGA CTACAGTTCTGCTGACAGTGTCTATTCATCTCGAAAAAGGATTGATGGGCTTGTTGAGTCATTCTCACAAAGACTATCTA CAGTAATATATGCAACACCAATTACTATAGATGATATCTCAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAG AAGAAAGGTGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGCATGGATGCAGGCTTCACGTGATGCTCCTACCAA CAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTT CAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGTG TTTCCGAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAACT GTTGGCCGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCTA CATTGATGAGATTTGGAAAATTCTGTGGAATTGTCACTATGGAATCTTTTGCGGCATCTGCGATGGGTCTTACTGTTGGA GCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATTGTTTTTGGAGGCTACTA TGTTAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTT GCATTAATGAATTTAGAGGTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACAGGAGAACAGGCACTCGAGCGA ATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCACAAAATAGAATACTGTTGTTTTGGTATTGCACCACCTA CCTTCTCCTGGAGAAAAATAAGCCCAAATACCAGCAACTTGAAACACCCCCTCTTGACCATGAAAGACCACATTTAGAAC TGGAGGAGTTCGATTCTGAACAACCTGACCAGACACCTGAAGCTCCACCCGTTAACCAAGTTGATTCCAATCAGCCCCTT GAGTCACCTGATGTAGATCCTGTTGGCCCTTTTATGCTAGAAGGTGCTAAGTAG
Protein sequence (LotjaGi5g1v0238900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEPL TYFSKFGYHCPDHVNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYATPITIDDISKSRKKISQRTVAK KKGGWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTTGV FPKERAIVDRERAKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTMESFAASAMGLTVG AMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDVQTGEQALER ISFGKSRIMDTVVAQNRILLFWYCTTYLLLEKNKPKYQQLETPPLDHERPHLELEEFDSEQPDQTPEAPPVNQVDSNQPL ESPDVDPVGPFMLEGAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 438 | 438 | 1.7E-166 | – | |
| Phobius | 1 | 190 | 190 | - | – | |
| SUPERFAMILY | 1 | 77 | 77 | 3.55E-14 | ||
| PANTHER | 1 | 438 | 438 | 1.7E-166 | – | |
| Gene3D | 1 | 87 | 87 | 2.7E-17 | – | |
| Pfam | 168 | 378 | 211 | 1.3E-43 | ||
| Phobius | 191 | 209 | 19 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| Phobius | 221 | 242 | 22 | - | – | |
| Phobius | 243 | 261 | 19 | - | – | |
| Phobius | 262 | 286 | 25 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 287 | 297 | 11 | - | – | |
| Phobius | 298 | 322 | 25 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 323 | 327 | 5 | - | – | |
| Phobius | 328 | 348 | 21 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 349 | 497 | 149 | - | – | |
| MobiDBLite | 440 | 497 | 58 | - | – | |
| MobiDBLite | 441 | 458 | 18 | - | – | |
| MobiDBLite | 465 | 480 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi5g1v0238900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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