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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0238900 |
| Transcript ID | LotjaGi5g1v0238900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT2G01320.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9ZU35|AB7G_ARATH ABC transporter G family member 7; TrEMBL-Plants: tr|A0A151U7T0|A0A151U7T0_CAJCA ABC transporter G family member 7; Found in the gene: LotjaGi5g1v0238900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54696909..54703117) extracted from Lotus japonicus Gifu genome v1.2.
TTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATGTGAACTGCTCGCAAGCCCA TCGGTTATATTTGCTGATGAACCCACAACAGGTAAGCATGCACTTTGGAATTTGCTTTGCAGTGGATTTGAAGTTTGCTT ACTTTGTAGGATGATGTAACAATAAAAGAACTTTGCGCTGAAGTGTATTCCTGCCTTCCTGGTTTACATTCTAAAATAAG AAAATAGCAATGTCTGAAATTTCAATATGCATGTTTAGCTTCAGATGCTTTCTGACGATTACCACTGATATTAGCGGTAT AGGAATTTCAATTTCAACATGCTCCCATGGTGGATATCTGTTAGGAAACCAAAAAAGAATGATCTTATTTCTCGACTGAA AATGAACAGAACAAGGAGAAAGATAAATGTATAAGTGAAGGGGTTTCCTCTTTCTCAACTGAGCTTTGCTTGCTCTCTCA ATACAATTCCCTTAATGATCCCCCACCCTTGCTTCCCCCTATTTATATATCTTACTAATCCCTCCTGACTCTATGTTCTA AATTTCTAATTGCCTATATTAACTAACCCCTTACTGTCCCCTTTATTCTTTCAAGCGACTACCATTCTTTCTAAACAGTA TCCTCTAATCACTCTGGGGCTGCTAAGATTTCGGGTTGCTTCTTAAAAAGGAAAAGAAGTCTACTTTGTTGCCTTGCTGC TTGTTCAGCATTGGCTTTATCATATTTAAACCCTGTCCTATAGGATTGTACTCATGGTTTAACCTGTTTTGCTGGGCTTC AAGCTAATGAAAGTTCTCGAATCTTGTAATTCTATCTTGGTTTGAGGGATATGATATGTATCTGATGACCTGGGTATGTC TACAATTTTACACAGATGTTATCTTGGTTGCTCACACCATTTTAACCATTTATCAGAAAATAAGTTCAATTTATCATTTA AGGTTCAGATAGTCTGAATTACTTATCAAGTTAATGGAGTATCTGAATAGTAATAACTTCATTTTAAAGTAGGCTAAGTG CAAGAAACCCCATTCAACTTACAAGTGAATTTCAGAAAACTATCTTGTGGTTACAGCTCGTCTTCTCCAACTTATGACTG TTCATATCAACTCCTTACATGGCATCTTTCGTACATGCACAAGGGGTTAGCTTCACATTAAGTTTTCACCCTTTGGTAGG TTTAGGTAGTTGAGTTTTTATGTGTTGAACCACAAGGGCTTTTTATGATGCTGACCTATAGCTAGAGGGAGGTTGTTCCC ATTTTGGCTTATAAAATATACAGCGGAATAATGTGCATTGTCCTGTCTGCCTTTGATGATTTTTCTGTTAAGAACTCTTG TTTTCATTTTAATTTTGAGGTTATAATGTGTGAATGGAATTTCCCAGCTAGTAGCTGCTACCAGATGCGGTTATTTTGTA CATACATTTATAACATCTTCCTCTCTCCCCCTCCTCCCACTTACTTTGTCATAAAGTTACTTTCAGGACTTGATGCGTTC CAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCGAG AGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGACG AACCATTGACATACTTCTCAAAATTCGGGTAATTGGCTATACCTTATTTATGTCACGCCATCATACATTTTTCACATTGG GAATTCTCTCAGTGTTTTATTATTTAAGAAACTGAGGCTGAGTTAACTTATTTATTAATTGATTCATTTTATTGTAACTA ATTATTTATAATAACACGATAACACAGACTTTTCTGTCTATTATTTGAGAATCTTACTTTGAAACATAAACTTTTAGAAA AGCCAATGAATCCAGATTATAAAAGCTTGTCAGAATTTCAAATTTAATCTTTACATTTAATTTATCATTTTATCAACTCT TTAATTAGTTGATATTGATAGCAACATTGTGGTAAGTGATAATCCTTGGAGTAACATCATGCATCTATAGTTATTCCACT TATTTACTTTTTAATCAAACCGTATTACGAATGAAGCTTTTATGCCACATGTCAAAGAATTTTTATAGTAAAGTCATAAT TTGAATAGATGCACTTCTAACTCTCTTCACTGTGTTCTAAACTTCATATTTGACTAATACCCAATTTTTACGCAGTTGAT AGATATTTCTGTTTTGGCTTCAATTTGAGATGGCAATTGATAAAAAAATTTATGAATTAGTCTTGAATTTTTCATCATTG TTTTTTTTTTTTCAAGTTAAAGGACGATATGTATTCATATTTCATCCGATCAACCAAAAAAGCCTAGTCTCTTTCTTTGT ATGGTTTGTTTGTTGTTAAAATCTCAACAGATGTAAGAAATAATGCATTGAAATGATAATCTTGTTTAACTTATATCTAT CACTTTTGGACCAGTAGTTCTGAACAATTGGTTGATGATTGTCGATGAAACAGGTACCACTGCCCGGATCATGTAAATCC TGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGACAGTGTCTATTCATCTCGAAAAAGGATTGATG GGCTTGTTGAGTCATTCTCACAAAGACTATCTACAGTAATATATGCAACACCAATTACTATAGATGATATCTCAAAAAGT AGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAGGTGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGC ATGGATGCAGGTCTTTCCTTTTAATTTCATCTTTTTTTTGTACTCGTCAAATGGCAGGACCTAGATAAATTGCATGATAG GACCTGTATTTAGTTTTCCTTCTTTCCCATGAACACATTTGATGTGCCTTACTTAAAGACTTCGGAACTTGATCAAGTCA TCTGGCAAGACATAATCACAAAATTTGCATTATTTCTTGCTTTTATGTTGTGAAGTTAAATTATTTATTTTCTCAATTGT GAATTACACGGCAGAGAGAAGTATATATAATACGCGTCATTAATATAAGATCCTTAGTTTCTCTAATTACGGTAATTATA AAATAATACACAACACATAATCAGCCCATACTTATCCTATTTTCATTTTTCTAACAAACCATATGACCTATATATTTTCT AGTTTTGGAGCATAAAAAAGGATAATTTATTTCTTGCACACAGGGTAAGGAGAATGGAATTTATTTCTCATCTATTTGAC TCATAGTTCTCTGGATGACTAGGCTTCACGTGATGCTCCTACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAA TTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTTGC GATGTTCTTGATTCCTGCATGCTTGTTTTTCATATTGACCTGCTGCTAACATGCATTGGAGAACCACTTTGATTTTTGGC AAGACACATGATTTGCTTATTAACCTAAAGTAAAACTTAATATTATGATAACCACCAACTAATTGGGCTTGGCTAGTGTT ATATTAAATCTAGTACACTTGACTTGACTACATGAGCTCCATCTTTTATTTAATTATGCTGACGAATGCTTTGAAATGCT TTGAAGTTTAAACTCAAATCTTGTTTTGTTATTAAAATGAAAGTCTCACTTGGCTAAGTTTGCTTTCTTGAATTACATGG ACTGTACTCAGGTTGCTGCAATTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGTGTTTCCGAAGGAACGGGCA ATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAACTGTTGGCCGAGGCTCCCAT TGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCTACATTGATGAGGTCAGTTT CCTATCTTGGCCCCTAGGAGCTTTAGTTTCAATCATATTTCAATTTCTTTTCATTTTATTTTGCTCTTTTTTGTCAGTAG ATCAAAATCTTATGTAATGCTTCATACAATGAAAATGGCCATGAAATGTGCATGATTTTCTATTTTCCTCATAATCCATA AATGCCTTTATTTTATTTTCAAAGATTATTTATATTGGCAAATCCCAATGGCCACAGGGGTATACATATCCATAGCCATA GGTGATGAATCATGAATGAATGTTCTGTAGAAAAAGAAATAATAAACTAAATATTTTTTGTTTTTCTCTTGATCTGTTTT GCCTCCATTCTAAAAACAAGAAAAAGTGAAATGGAAAGTGGGAAAAAGTTCATTCCCCATGTTATTATCTTGTCACTCCT TACTTTCTACCTTTGCTCTTGAGATCTTCTATTTAATTCTTTCAATCTCATATTATAACTAATTAGTTTTAAATTGTAGA TTTGGAAAATTCTGTGGAATTGTCACTATGGAATCTTTTGCGGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCC AACTACTGAAGCAGCTATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATTGTTTTTGGAGGCTACTATGTTAATCCTG AGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGTAAGCACAATTCTGATTTGAGTAAGAG TTGTTAACTTCAACTGTATAGGTCAAACAGAAGTTTAGTTGAGCTAAACATCCATGTAAAGTTTGATATATGTTTCTCTT GCTCTGATACTAATGACTACCATATTGATTTATGCATTCTTTCAGGGCCTTTCAGGGACTTTGCATTAATGAATTTAGAG GTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACAGGAGAACAGGTGAGGGGAGAGAGACAAATATTCTACCTC AATTTAGAACTATTGTCAAGTTCAATAGAATTGAATAAAAACAACATATCTTATGACTAGTGCACTCCAAAACCAAAGGG AAATTTTATCTTTTCTTTTTCTAATATAAAAACGCTTACAAAGGGAAGAACCAAGCCAGAAAACATGATTGCTTTTGGGT ATGATAAGGATGTATAAATGAGGGAGGAAAAAACAACTAACCCTATTAGCTGGCCTGATTGAATAGACTAATCACCATCA GTTTTTACCGAAATGGTTTTGTTCCTTGAGCAGTAATGGTTTCTAACTCCTTCATATAAGCGCTAAATTTAGAACATTAA CATGGACTAATAATTTGCCATTGTTCAACCATTTCTTTAAGTTGAAATTGTGATACTGTCATAGTTTATTGGATATCTAT TTAAGTAGAAGAGATAGTAATTAAACATAATACCTATCTGGTTTTCTACTGTCACATACGTGGAAAAAGTAGTAGTTTAT CTGCATGTGGTTTCTTGAATGCTGATGTGTTTCCCTTTCTTATCCCCTTCCCTCATTCACAGGCACTCGAGCGAATTTCC TTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCACAAAATAGAATACTGTTGTTTTGGTATTGCACCACCTACCTTCT CCTGGAGAAAAATAAGCCCAAATACCAGCAACTTGAAACACCCCCTCTTGACCATGAAAGACCACATTTAGAACTGGAGG AGTTCGATTCTGAACAACCTGACCAGACACCTGAAGCTCCACCCGTTAACCAAGTTGATTCCAATCAGCCCCTTGAGTCA CCTGATGTAGATCCTGTTGGCCCTTTTATGCTAGAAGGTTTGTAATCAGCTGGGCATTACTCCTGTTCTTCTCAGACATT CATCTATTTATTGATTTATCTGATACAGGTGCTAAGTAGATATCTTTGCAAAGGATCATCTGCAATTACTGAGACAGTAA GCCGTTTCCTATAGAACAGGACCACAATCACGATGTCATTATTCGACATCCAAAACATCAGCTTGTACTTGTCACTAATA AAAAACAGTGACTGGATAATTTTAGGCTGTATCATGGACATGGTGGTTCATTTGATTATAGCAGCTATTTTCATGCGGAA ATCATCCTCATTCTTGATTGCTTTTTCCTTGAGATGACTCATCCCCTAATTGTATGTTCATGGCTCTATTTTTTGGCCTC ATGGTTTTAACTTGTCACCATTAACTTGGGTTGGTTTTTCTTTTTTAAT
CDS sequence (LotjaGi5g1v0238900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCCACAACAGTTACTTTCAGGACTTGATGCGTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACA AGATGGTCATACTGTAATTTGCTCTATACATCAGCCGAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAA CTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGACGAACCATTGACATACTTCTCAAAATTCGGGTACCACTGCCCG GATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGACAGTGTCTATTCATCTCG AAAAAGGATTGATGGGCTTGTTGAGTCATTCTCACAAAGACTATCTACAGTAATATATGCAACACCAATTACTATAGATG ATATCTCAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAGGTGGTTGGTGGAAGCAATTTTGGTTG CTCCTTAAACGAGCATGGATGCAGGCTTCACGTGATGCTCCTACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGC AATTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTG CTGCAATTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGTGTTTCCGAAGGAACGGGCAATTGTTGATAGAGAA CGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAACTGTTGGCCGAGGCTCCCATTGGAGCAGCATTTCC ATTAATGTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCTACATTGATGAGATTTGGAAAATTCTGTGGAATTG TCACTATGGAATCTTTTGCGGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACTACTGAAGCAGCTATGGCA GTAGGCCCCTCTCTTATGACTGTTTTTATTGTTTTTGGAGGCTACTATGTTAATCCTGAGAATACCCCAATCATCTTCCG CTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATTAATGAATTTAGAGGTCTTCAATTTGATC ATCAGCATTCATTTGATGTTCAAACAGGAGAACAGGCACTCGAGCGAATTTCCTTTGGAAAAAGTAGGATTATGGATACG GTGGTAGCACAAAATAGAATACTGTTGTTTTGGTATTGCACCACCTACCTTCTCCTGGAGAAAAATAAGCCCAAATACCA GCAACTTGAAACACCCCCTCTTGACCATGAAAGACCACATTTAGAACTGGAGGAGTTCGATTCTGAACAACCTGACCAGA CACCTGAAGCTCCACCCGTTAACCAAGTTGATTCCAATCAGCCCCTTGAGTCACCTGATGTAGATCCTGTTGGCCCTTTT ATGCTAGAAGGTGCTAAGTAG
Protein sequence (LotjaGi5g1v0238900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPQQLLSGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEPLTYFSKFGYHCP DHVNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYATPITIDDISKSRKKISQRTVAKKKGGWWKQFWL LLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTTGVFPKERAIVDRE RAKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMA VGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDVQTGEQALERISFGKSRIMDT VVAQNRILLFWYCTTYLLLEKNKPKYQQLETPPLDHERPHLELEEFDSEQPDQTPEAPPVNQVDSNQPLESPDVDPVGPF MLEGAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 179 | 179 | - | – | |
| Gene3D | 6 | 76 | 71 | 2.4E-9 | – | |
| SUPERFAMILY | 7 | 66 | 60 | 3.25E-6 | ||
| PANTHER | 8 | 427 | 420 | 3.9E-155 | – | |
| PANTHER | 8 | 427 | 420 | 3.9E-155 | – | |
| Pfam | 157 | 367 | 211 | 1.2E-43 | ||
| Phobius | 180 | 198 | 19 | - | – | |
| Phobius | 199 | 255 | 57 | - | – | |
| Phobius | 256 | 278 | 23 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 279 | 289 | 11 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 290 | 311 | 22 | - | – | |
| Phobius | 312 | 316 | 5 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 317 | 337 | 21 | - | – | |
| Phobius | 338 | 486 | 149 | - | – | |
| MobiDBLite | 429 | 486 | 58 | - | – | |
| MobiDBLite | 430 | 447 | 18 | - | – | |
| MobiDBLite | 454 | 469 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi5g1v0238900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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