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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0240800 |
| Transcript ID | LotjaGi5g1v0240800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyketide cyclase / dehydrase and lipid transport protein; TAIR: AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|P55049|YMEL_STRLN Uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region; TrEMBL-Plants: tr|B7FHB4|B7FHB4_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0240800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54896687..54904891) extracted from Lotus japonicus Gifu genome v1.2.
GCTCTTTTCTTTTCTTTTTGGTCTATAAAACAATTCTACTAAACTTTGGTTCGGCCATATAGTATTTTTAGCAATTTACA AAGCCCAAGGTCATTGACCAAAAAAAGCCCAAGATTGAATTTAACGATTAGCAATTAAAAATAAATTGAGTGGACTATTA AGTGGATGAATGAAAAATGAATTATGATGGAAAACAAGCATCCATGATCGCAGCACGTGGATTATTATTATATGATTCAC AATAATCACAGTTTCACATGACAAGACGAGTGTGCAAGTGTGTCTCTGAACTCTCAACTGAAGATTCATTCGACTCTTGA CCATGTCTTCTGCAACTGCAACTGCAACTGCAACTGCAACTATGATCATCAGCTCCATTTCAACAACAGCTTCATCTTCG TCTCCAACCAGAACCACATTTCGCGCCAATTTCACTTCCAGTCCCAGAAGCATCCTCGCAACTCCACTGTCTTCCAACCA CCTCTTCTTCAAGCTCCGTCACTGCTCTTCTTCTTCATCGAAGCGATTCCCAACTTTCAAGCGCTTTTCCCCCGTCATGG AGTGGCAGGATTCCACGTATCTCCTTTCTCTTCACTTCTCACTAGCTTATTACTCTTTTTTCTAATTTTTCCAATCAATT TTCCAATTATTTCTCACCATGGTACAATTTCATGTGAATTAATTTCATTTTTATGTAGTTTATCTTGTGGTAGCAGGTTT TAGGTTGAATTGTGTTGTCATTTTGCACATTTCTATGTTAGACGACAATGTCTTTTTATTGAAATTGTGCATTTTTCAAT GAAAAGAGAATATTATTGCCAACTGCAGGGTCAAGATGGAGGTTGATGTGCCCATCTCTGTTGCCTATGCTTGTTATTCT GATCGTGAAGCCATTCCAGAATGGATGCCCTTTATTTCCACTGTTAAGGTGCGCTTGCTTTCCCTATCAATTCAAATTAG CCAATGTTTGAGTTGTGTATGTTGCTTATGACATGTCCCTGTGTTTTTGAAAGGGCTTTCAGAATTGGAAATTATTGTCT GCTAAGTGTTACAGAGAAGATATTGTTTTTGCTTGGTTTCCTTTTGCTAAATCAAACATTTTAGCTTGTTTGTTTGAGTT GTGTTGATAAGACGAGAGGAAATACAATTAAATTCTAGCTTTGGATCCAAATGTTGAAATCTGCAATTTTTCATTCAAAT AATTATAAAGTGAACAAGACGTCAAGGAAGGTGAAACTGTGGAAGAGCTATTTCCATACACTTTTTAATGAAGAACATAA TTATACCTTGAACTCTGGTAGACTTACAACTAAAGTGGAGGATCAAAATTACTGCTGCAATCAAAGAATCCAAGAGTATG AGGTAAAAGAAGAGTTGAAGAGGATGACTGCTGGGAAGGTAGTTGGAACAGATGATATACCTGTTGAGGTATGCAAGAGG CTAGGTTACAAAGTTATTTGATAAGATTTTGAAGTCAAAACAGCATGCCAAATAAATAAAGGAGAAATACTTTAATCCCA TTTTTTTTATGATAAAGGTTATATACAAAACTATTCAACTTATAGAAGTATTGAACTCATGAGTCATACTAAGAGGTTTT GGGAGAGGGTAATCGAGCAAAGATTTAAACAAGATTCACCATGGAAAATCAATTTTGCTTTATATTGGGGGGATAGATGA TGGAAGCTATATACTTGCTACGTAGGTTGATGGAGAGATATTGGAGATATCGCAAAGACTTATACATGGTTTAAATTGAT TTGGTGAACGCATATGATAGAGTACCAAAAGAGGTTCTCTAGAAGCCTCTTGAGGAAAAGGAGTTTGGATTATTTACATC AAAAGAATCAAAGATATGTATGAGAGACCATTGAGGCAACAACTAATGAGAAAAAACAATGGGTGAATATGGAAGATTTC CCTAGAACATGCACCAAGGGTCAACTTTGAGCGCTTATCATTTCATTTTAGTTTTAGATGTTCTTACTGAACATGTACAA GAGAAGGTGCCATATGTATTGCAAATTTGAGAGTCAAGCGAAGAAATAAATAAAAATTAAGATACGGGGGCAAGTCTTGG AAACACACAAGTTTTGCTTAAGTAGCAGAAAAATAAAGTATCTGGAATGCAACTTTAGCAAGAGATGCACTTATCCCAAC TTAGAGGTGAAAATTGGAGAACATATAATACCGTAAGTCTCATATTTTAAACCCCTTGAGTTCATTATACAAAATGATAC TGAGATAGAAGGTGATTTTAACCATAGGTTCCAAGCAGGGTGAATGAAATTGAGGAATGATGCGGGTGTAATATGAGATA GAAAAGTGCCACTCGAGTTTAAAGAATTTTTTTGTCAGTACAACCATAAGACTTGCAATGTTGTTTGAGACTAAACATTG TGTGGTAAAGAATCAACTAGAAAAGAAACCCAGCTCAGCGTTGCAAAAATGTGAATTTTATGATGGATGAGTTGATAAAC TAGACAAGGTAGAATTAGAAATACAATTATTAGAGAGAAAATTGGAGTAGCTCTTACGGTAGAAAAGATGGTAGATTTCG TCATAGGTTGTTGGGGCTAGGGTTGTCAATAGTGCACAAAAGTGGCACTATTGTATTGTTTGTGTGGCATCACAGGCTCA TGGTCACCTGTGGGGTCACGGGCTGATGGTTGGTGACCACTTCAGTTAACTTCATCGCATTCTGTTTCAGTGTCCCGATC GTCGTGGCTGCTAAAGTGATGAAAATCCCAATACTTCGCGTGCTTTGCACCAGAATGCTGAAATATATGTCAAGAAACAT TGCTCTCCGGTGACTTTCCGGCCACGATATGGTGTTCTCTTACTAACCCTTGCACTTTGTCCCTCACATTGCATTTTCCA ACCTGTTACCGTGTGACCTATTACTCTCTGGTGACTTTCCAGCCATAGCCTGGTATTTTTGGAATAATATCCTGTTTTCT AGCAACTCATTACTCTGTTTTCCCTTTTACCTCACTGTCCCCCCCCCCCCCCCCGCGCATGTTTATCTTGTTCTCTCCTG GTCCTCTTCTCTTCTTTTTTTGCTCTCTTTTTCTATATTTTGAGTAATTCTGTAGTGTTTGAGCATTTATATAGTAAATA GTTTAATCTATATAAAAAAAAATAGCTGCAATATTGCTATACACTATCCCACTAGCATTTTTGGGGCCGCTATCCAGGAT TGATAACCCTGGTTTGGGCATGTAATGTCCATAGATGCAGCAGTTAGGTGAGTTCATCAAATGGAGGATAGTCCTATAGC TAGAGGTAGACCATAAAACATTATTGGCAAAACCATTAGGAGAGATTAGAAGTAAATAATTTATATTTGGATTTAATTCA TGACAAAGATTTATGACATCATTGGATCCAAGTAATCAACATCACTTAGTGGGTAAGTCTTGGTTATTGTTATTGTTGTA ATCATAAAATGAAAAATACAAAACAAAAATATTTATGTATGCTAATGTTGGATCTGTTCTACAGATATTGCCCGACAAAC CTGACCTGTCAAGATGGTCCTTGAAGTACAAGGCATTCGGTCAGGATATTGAATTCTCTTGGCTTGCTCGTAATATGCAG GAAAAGATCTCCTACCTTCTACATTATACAACTTCTCTACAATAAATGCTCTTTACTATTGGTATTTTTTATTCATGTTA GATCACCTTCTTGCAGCCCATTCCAAATCAGAAAATCCACTGGCGATCTCTGGAAGGTCTTCCAAACAGGTAACTGACAA GGACATTTTTTAGAAGTGAATGTAGTGTTCTTCATGCCCTTTCTATTGAAATTTCAGCAGTTCATCAGTGTGGGGACATT TGAATTAAGAACTGTGAAGAAAGTTCAGATATGCATTTCTTTATGGACTCTTCTATATATTATTTTGAACAGTCCAGGCG CTATTGTAGTTTGGCTTAGCAATGATTAACCATAAAATTTTGGACCAGAGGTGATCTTGAAATACTTGATGATTTGCTGA AGTCATTTAAAAAATAAAAGAACCAACATAATCTTATTTGTGCCATTAACCTTTGGTTGGCAAACAAAAAGAGGATGAAA AGAAAGGAGAAGAATTAAAAATAAATTTAGACATTCATACATACATGATACATTTATAGTGTTATTGTCATGCCTGCCCT TTATTTTGTTTCACCTCTCAAACACAGTATTAAGTAACACTTACTACTGCTTAACGTGCTGAATATACCATATAATGTAG AATTTATGCTATAAAACTTATATAAGAGTACTAAAGAAAGGAGGGAGGAAAAATCCTTCCTCGAATTGATGCCCCAGCGT TATTCAGCCGCCTAAGATTCAGTATTTATCTGCGAAATTCGGCAACGAAGGTCATTAGAAGTGTCTTACTCTGATGTTTA TCCCAGGAATTAAACACTGCAGGCCTTAACAGGTACTTCTAGCTATAATTAGCTGGTCGGGAAAGCCAACATCCAGCTTT TATGCCTAATGAATAAGTATTTTCAGGTTTCAATCCCTAGAGTCTGACCTGAAACTTGTGGATTTTATGGTATATATACT TCATAATCTCTTTATTTAACTTTATAGAAGTGAAATGCTATAAGTAGGTTGTAATCAGGTCAGCATTTTCCTTTATCTGT CTCTGGCATGTTATGTTTCTGCATTGACAATAGATACATTTATGAACTAGGATGGTATTGTTTTCGCCTGAGCCTTTACT AACAGTTAGTTGACTGGCTCACAATGTTGTCAAATGCAATGTTTTAATCATGATTAAAGGATTCCTGGTTGTATCTTGTT CAAGCCATCTAGTGGCTATAAAACACACGATGCATGACCATGTTTAGCACTACCGTTAGTCTAATCTCCATTTATCATTA AAACAATCATTATGACTTATAATCATGGATACTCTTTACTTTAAAGACATTTAATTGCTTGATTTCTCATGTGCAGAGGT GCAGTACGATTCTATCCAAAAGGTCCTTCATCATGCATAGTAGAAGTAAGGCCATTCCCACGTTTTTTACATGTCTTACC AATATGAAATTATTTTATGAAATTTAATCTTTCATATAGAACTTTTGTCAACATACTTTGATTGCATATTTATGAAAAAA ATTGGGTGAGCCAATTTCAATTGTAAATCCCAAAAATGTACTGTTTGTCAAAGTAGGGATGGCAACGGAACCCGAACCCG TGGGTCCGCCCGAACCCAAACCCGATTTTACGGGTAAAACCCGATATGATTGGGTTTGGGTTTGGGTTTGGTATTGGTGA AACCCGCACCCGAACCCGAACATTATATATAAAATTGCAAAACTACTCTTACATATCATGTTAACAACTTAATTTGTTAA CAATCTGATCAAATTTGAACATTAAGGTATCATATTTTTTGACAAAAAAGATATAAAATGCTTTTTCACAACAAAATAAT ACAAGTTGCATTTTGTTTTGCAAAAAGATTTATACATTAATTTAGGTTATGACGTGAATTTGAGGGCTACAACGGGTTTG GGTTTATATGAGAGTTTGGGTTTGGGTTTGGGATAAGCAAAACTCAAGCCCGACCCGACTTGTTGCCATCCCTTTACTAG CTGCATGAACCTATTAGTGCATGAACCTATCAGTTCAACTAATTGCCCAAACCTATCGGTTCAGTGCATAACAGCTAGGT AGGGCACCACATGTATGCATACTTACAATAACTTGTCCTATAAGTCACATCCACATTCTTTCCACGTTTTCACCTTTTAA CAAAGAATGAGGAAAGTTTGAAAGTGATGACACAAAGAAATAGGAAAAGTTGAAAGTAATAACTAACCACTGCTTTTTTG TCTGTTACAGCTGACAGTCTCATATGAGGTTCCTCAACTTTTAGCTCCAGTTGCATCGGTACGTAATCTAACCTTGAATA AAAGCTGAATTTTTTTGTAACTTACAAAAACTGTATATGAATTTCCAATCTTCATTTACCCTTGACGTTCTCTACCCTTC ATCATCATTTGCAGGCACTGCAACCTTTTCTTGAAGGTTTACTTCGAAATGGTTTGGAAAGATTTGCTAAGTTCGCAAAG TCAAAGAGCTACTAAATCACAGATTTTATTATGATTGTCCTGAATTTTAGAGCGGGACTGCAGTTCTAAAAATTAGTACA CATGATTATTTTTCATGGCGATATTCTCTATGTCCAAACATTGATTGAATTTGTATAGAATTTGGGCACAGTTATCATTC AACTGTTGTTTGCATCATCGTGGTTATCCCAATCATCGCTGCCAAAAATGCAGTCGCTGCCAAAAATGCAGAAGATCTTC TGCATCGCAACCTTGTGGCGTAGCTTTGGATTCACCATGAGGACCAGCAACTCATAAAGCGTAGTTTTATTTCTGTATCC TGGGTAATGTATGTACTTTTCACATTTATATATTTAAGGTCCTACCTTTAGTCAAGCTGTCTTCGACCTGAGAAGCTCCC ATGAGTCCTAAGATCAAACTCATGTCTATACAAAAAATGTTGATACACCTTACCCATTGCTGATAACGTGATACAAAAAC TAAGATTATGCCAAAGAAAATTTTATTGACACACAAGAATGTGACATGAATATGGCGGTCATAATGGAAAGAAAAATGGA CTATAATACAAAAACAATACATATCTACACCGCCACCATCCTCTAATCTGGGCTATGTACATCAACCGACCACGTGAAAA AAAAATGATGGCTGCTTTTTCCAATGTCTAAACTAGAGCAGTCAAAAACAGCACACATTATTCCAAGTAAACTGTATATA CACTCGGACTCAGTTGCTAGCACCTCCTTCCAACAAGCTTCTCAAGCTACAAAGAGCCTCTGCAGAGAGACTACAGCATC TCAATTTCCGTTGAGGTGGGGATGGCTCTGATTCCCTGTGGTCAAGGGAAGAGAAGCAAACAATTATCACTGTGAGGTTG TCAAATGTGTTCAGTCGCAGTGCCTCCATAACCAGGTCCCTCGCGCACCTCTCTGGGTCATCATGCCTCCTCAGGCCTTT GCGAACAAGGCTAACAGCATGCTGGCTTGACATCACATCCCAGATGCCGTCGCATCCTATGATGAGGAATTCATCATCTT CTGTTAGAACCATTTGCCGGAACTCGGGTTCTGCAATCAAAGGTGAGGGGGCACCCTTTGGTAGCTTCATGTCCCAGTCT CCTAGTGCTCTAGTAACTGATAGAACCCCATTGAGATATCCATCTTCTATGTAGCCTCCCAAATCTTCAACTCGCCTCCG CTCTGATGGATAAATAGGCCTGTGATCTTCAGACATGTCAATGGCCTCTCCTTTGCGGCTGAGAACTGCTCGGCAGTCAC CAGCATTGGCCACCATCAAGAGCCTGGAAGAATAGCAGAAATCAGCAAAAGCAGGTACATAAGACAGGTTGTATCTCTCA AAATACCAATACAACCAAAGCTTTTTCTCCATTTAAGTGAAGTTGACTAATACCATATTTAGATTAACTTCTCTTTCCTC AAAATCAATTATGAAAGCAAAAAGTAACTCTCACAATACGTCAGCTAAAAGTTACTCACACAATACGTTTGGTTTTGATT TTGGCCCGACAAAATCACTTATAGGTTCCAAAAGCAACTATTTCTTACTTATGTTTCACACTATTATGGTATATATGTAA TTTTAGCCATCTTTGCCAAACACGCTAGCTTCTTCCAAAATTGGTTCTGTCTTTTGAATCAATTATAGAAAGATTTCCAA ACATGCACTAAATGAATCAAACAATAAATAATACTTATAGTGAATCATTTCTAATAAAAGACCACTTAAATCAATATCCT TCTTAATGATTCGACTTAATTTTCCCATATTTTTCTATACCTCTAGTAAGAAAGTAGATAAATATAAGCTAGTAAGCTAA TACCCATGTTGCAGATAAAGGAGAATTATGAGTGCAAGTATGGATATACCTTCCAAATATGAAAGCAGTAAGGGCTGTGG TTCCTGATGAAGTATTCACACTGCAATCATCAGCCAAAGCTGAGTCAGCCAAAAGAAATGCCTTTCTGAGGGAATTTTCT ACCTCTTGTAAAAACACCTTGTCAACTTCAGAAGTCTGAGGAAAACTGACATCCTCAAAGAAGAACTTAATAACATTTTT TCTGATATAAGCTGCTGCTTCAGGTCCTCCATGACCATCAAACAC
CDS sequence (LotjaGi5g1v0240800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCTGCAACTGCAACTGCAACTGCAACTGCAACTATGATCATCAGCTCCATTTCAACAACAGCTTCATCTTCGTC TCCAACCAGAACCACATTTCGCGCCAATTTCACTTCCAGTCCCAGAAGCATCCTCGCAACTCCACTGTCTTCCAACCACC TCTTCTTCAAGCTCCGTCACTGCTCTTCTTCTTCATCGAAGCGATTCCCAACTTTCAAGCGCTTTTCCCCCGTCATGGAG TGGCAGGATTCCACGGTCAAGATGGAGGTTGATGTGCCCATCTCTGTTGCCTATGCTTGTTATTCTGATCGTGAAGCCAT TCCAGAATGGATGCCCTTTATTTCCACTGTTAAGATATTGCCCGACAAACCTGACCTGTCAAGATGGTCCTTGAAGTACA AGGCATTCGGTCAGGATATTGAATTCTCTTGGCTTGCTCGTAATATGCAGCCCATTCCAAATCAGAAAATCCACTGGCGA TCTCTGGAAGGTCTTCCAAACAGAGGTGCAGTACGATTCTATCCAAAAGGTCCTTCATCATGCATAGTAGAACTGACAGT CTCATATGAGGTTCCTCAACTTTTAGCTCCAGTTGCATCGGCACTGCAACCTTTTCTTGAAGGTTTACTTCGAAATGGTT TGGAAAGATTTGCTAAGTTCGCAAAGTCAAAGAGCTACTAA
Protein sequence (LotjaGi5g1v0240800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSATATATATATMIISSISTTASSSSPTRTTFRANFTSSPRSILATPLSSNHLFFKLRHCSSSSSKRFPTFKRFSPVME WQDSTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPDKPDLSRWSLKYKAFGQDIEFSWLARNMQPIPNQKIHWR SLEGLPNRGAVRFYPKGPSSCIVELTVSYEVPQLLAPVASALQPFLEGLLRNGLERFAKFAKSKSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 224 | 224 | 4.6E-102 | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 224 | 224 | 4.6E-102 | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| Phobius | 17 | 25 | 9 | - | – | |
| Phobius | 26 | 226 | 201 | - | – | |
| Gene3D | 84 | 225 | 142 | 1.1E-32 | ||
| SUPERFAMILY | 85 | 223 | 139 | 5.69E-22 | – | |
| CDD | 88 | 223 | 136 | 5.85069E-45 | – | |
| Pfam | 90 | 217 | 128 | 5.1E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0240800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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