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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005031
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We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.536s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0165619.1
n.a. polyketide cyclase / dehydrase and lipid transport protein [Arabidopsis thaliana] gi|30678933|ref|NP_849282.1| chr0 78635792 78638107 -
2 domain predictions
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Lj1g3v1650150.1
n.a. PREDICTED: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like [Cicer arietinum] gi|502132865|ref|XP_004501565.1| chr1 19784601 19788463 -
2 domain predictions
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Lj1g3v4139430.1
n.a. Lachrymatory-factor synthase [Medicago truncatula] gi|357492545|ref|XP_003616561.1| chr1 49010229 49010905 +
2 domain predictions
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Lj4g3v2845120.1
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr4 38012826 38017769 -
2 domain predictions
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Lj4g3v2845120.2
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr4 38012826 38017769 -
2 domain predictions
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Lj4g3v2845120.3
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr4 38012826 38017650 -
2 domain predictions
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Lj6g3v1549200.1
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr6 17719123 17721305 +
2 domain predictions
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Lj6g3v1549200.2
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr6 17719123 17722283 +
2 domain predictions
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Lj6g3v1549200.3
n.a. cyclase/dehydrase family protein [Medicago truncatula] gi|357520155|ref|XP_003630366.1| chr6 17719755 17722283 +
2 domain predictions
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LotjaGi1g1v0355200.1
n.a. Coenzyme Q-binding protein COQ10 like, mitochondrial; TAIR: AT4G17650.1 Polyketide cyclase / dehydrase and lipid transport protein; Swiss-Prot: sp|Q96MF6|CQ10A_HUMAN Coenzyme Q-binding protein COQ10 homolog A, mitochondrial; TrEMBL-Plants: tr|Q00M76|Q00M76_SOYBN Aromatic-rich family protein; Found in the gene: LotjaGi1g1v0355200 LjG1.1_chr1 82665755 82671874 -
2 domain predictions
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LotjaGi1g1v0355200.2
n.a. Coenzyme Q-binding protein COQ10 like, mitochondrial; TAIR: AT4G17650.1 Polyketide cyclase / dehydrase and lipid transport protein; Swiss-Prot: sp|Q567E6|CQ10B_DANRE Coenzyme Q-binding protein COQ10 homolog B, mitochondrial; TrEMBL-Plants: tr|Q00M76|Q00M76_SOYBN Aromatic-rich family protein; Found in the gene: LotjaGi1g1v0355200 LjG1.1_chr1 82665755 82671874 -
2 domain predictions
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LotjaGi4g1v0413400.1
n.a. Polyketide cyclase/dehydrase and lipid transporter; TAIR: AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter; Swiss-Prot: sp|Q02572|CYPC_STRCN Putative polyketide cyclase; TrEMBL-Plants: tr|G7LFP8|G7LFP8_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi4g1v0413400 LjG1.1_chr4 78916341 78922235 -
2 domain predictions
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LotjaGi4g1v0413400.2
n.a. Polyketide cyclase/dehydrase and lipid transporter; TAIR: AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter; Swiss-Prot: sp|P23154|CYPC_STRCO Putative polyketide cyclase; TrEMBL-Plants: tr|G7LFP8|G7LFP8_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi4g1v0413400 LjG1.1_chr4 78916646 78922138 -
2 domain predictions
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LotjaGi5g1v0236300.1
n.a. Polyketide cyclase / dehydrase and lipid transport protein; TAIR: AT4G01650.3 Polyketide cyclase / dehydrase and lipid transport protein; Swiss-Prot: sp|Q06442|WNT5A_AMBME Protein Wnt-5a; TrEMBL-Plants: tr|I1LAW0|I1LAW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0236300 LjG1.1_chr5 54420156 54422880 -
2 domain predictions
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LotjaGi5g1v0236300.2
n.a. Polyketide cyclase / dehydrase and lipid transport protein; TAIR: AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein; Swiss-Prot: sp|Q91820|AURAA_XENLA Aurora kinase A-A; TrEMBL-Plants: tr|I1LAW0|I1LAW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0236300 LjG1.1_chr5 54420156 54422880 -
2 domain predictions
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LotjaGi5g1v0236300.3
n.a. Polyketide cyclase / dehydrase and lipid transport protein; TAIR: AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein; Swiss-Prot: sp|Q91820|AURAA_XENLA Aurora kinase A-A; TrEMBL-Plants: tr|I1LAW0|I1LAW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0236300 LjG1.1_chr5 54420156 54422880 -
2 domain predictions
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LotjaGi5g1v0240800.1
n.a. Polyketide cyclase / dehydrase and lipid transport protein; TAIR: AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|P55049|YMEL_STRLN Uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region; TrEMBL-Plants: tr|B7FHB4|B7FHB4_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0240800 LjG1.1_chr5 54896687 54904891 +
2 domain predictions
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LotjaGi5g1v0240800.2
n.a. Polyketide cyclase/dehydrase and lipid transport superfamily protein; TAIR: AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q7VFF6|MQO_HELHP Probable malate:quinone oxidoreductase; TrEMBL-Plants: tr|G7IBT4|G7IBT4_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi5g1v0240800 LjG1.1_chr5 54896877 54906483 +
2 domain predictions
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LotjaGi6g1v0256300_LC.2
n.a. Polyketide cyclase/dehydrase and lipid transporter; TAIR: AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter; Swiss-Prot: sp|Q9NYQ2|HAOX2_MOUSE Hydroxyacid oxidase 2; TrEMBL-Plants: tr|G7LFP8|G7LFP8_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi6g1v0256300_LC LjG1.1_chr6 56917768 56921396 +
2 domain predictions
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LotjaGi6g1v0256300_LC.3
n.a. Polyketide cyclase/dehydrase and lipid transporter; TAIR: AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter; Swiss-Prot: sp|Q68DI1|ZN776_HUMAN Zinc finger protein 776; TrEMBL-Plants: tr|G7LFP8|G7LFP8_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi6g1v0256300_LC LjG1.1_chr6 56917898 56922104 +
2 domain predictions
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LotjaGi6g1v0256300_LC.4
n.a. Polyketide cyclase/dehydrase and lipid transporter; TAIR: AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter; Swiss-Prot: sp|Q9NYQ2|HAOX2_MOUSE Hydroxyacid oxidase 2; TrEMBL-Plants: tr|G7LFP8|G7LFP8_MEDTR Polyketide cyclase/dehydrase and lipid transporter; Found in the gene: LotjaGi6g1v0256300_LC LjG1.1_chr6 56917898 56922104 +
2 domain predictions
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