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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0242500 |
| Transcript ID | LotjaGi5g1v0242500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Long-Chain Acyl-CoA Synthetase; TAIR: AT2G47240.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|O22898|LACS1_ARATH Long chain acyl-CoA synthetase 1; TrEMBL-Plants: tr|A0A109Z9U2|A0A109Z9U2_ARAHY Long chain acyl-CoA synthetase 1; Found in the gene: LotjaGi5g1v0242500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55108664..55116010) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTATTCCATGGTGTTTAGAAGTTGTACTCATTGTCCATACCTTTCAACTACCTCATTTACCACCGCAACTTGTTCTA GTCTTTTAATTTAGCTATAAATCTCAACTATGTTGTTCTTCTTCGCCAAGAATAATCGATCTTATTCTGTGTATATTGTC CCACACACTCACCATCTTTGTTAGAGCAAGTTACGACCCTCCTTAAATACACACAGGAATTCAATTTAATTTACTACGTT CCCAAGTACAGTTTACAACCCACGCCACCACCTCTGCCTTTGTCTGTAAGCGTATGTATATATGTCGTTTTGTTTGTATT TTGTGTGGCATTCAGTTCACCCTTGTGGTCCTTCAAGTTTGATTTGTTTTCTACTTCATTTTTTGAGTTTAACATAAAGT GATTCTTGTGTTACTTCAACCTCCACCTCAATGTGACAAGTTCAAATTTGATTTTAGATTTTTAACTTTGAGCAAATGAA AAAGATTTTTTTTTAAAGTCATGGTTTTGGACTTTGTATTGATGACCTTTTTATTGCCGTCACTGACCAAGTACTTGGGT GGTTTGATTCTTCTATACAGACATTAATTGAGTTACGGAAAAAGGAAAGAGTTGGTGTGTATTTTTTTTTCACTAGTACT TAATTGGTTGCTGATGCTTTGTGTTGTGTGTGTCATTCAAATTTTGGTAACAGAGGAAAATGATGAAGACCTTCGCAGCT AAGGTTGAGGAAGGAATAGAAGGTAAAAATGGCATACTATCTCTTGGTCCAGTGTACAGGAACCTTCTCTCCAAAAATGA CTTTCCTCCAATGGATCCTGATTTCAGCACCGCTTGGGATATTTTCAGGTAATTTCAGCTCCTATAATTCCGACACCGGA GCTACTTACAGAAGTTTCTCCGTAAAATTAACTTTAGCTTTAGAATAAATAGAAGGATTTTCAAAATGCACTTACTTATA ATAATAATTAAAAAGTTGGGGTGTCTTAAATTTCAATGTAGATAGTTGAAACTTGAAATTTTGGTGGTTTATCTACTAAT GATAATTTCTGAATGACTTATTGTTTGATGATTGCAGTGTATCCGTGAAAAATCATCCACAAAATCGGATGCTTGGATGG CGTGAAATTGTTGATGGAAATGTATTTTATGGAAATTCAATTTCATTTTTAATGTAACTTGGTACGTGTCAAGAAGATAA GGTAAATTGTTTTTGGTTTATGTTTCCAGATAGGACCATATGTTTGGAAGACATACAAGGATGTTTATGATGAGGTTCTG CATATTGGCTCTGCTTTAAGAGCATCTGGTGCTGAAGCTGTAAGTTCTGGAACAAGGGTTCATCATCATTACGTCGATTA GCATGTTTGGATCAACTTCTTTTTTGATAAGATTAATTTGAACACTTAAAAACTACTTTATAGAAGTTTCCATCCATAAT TGAGTTTAACTTAAGATCAATTGTAGAAGGATTTTCAAAGATGCACTTTATACTTTATATGGTTGAATATTAATTTTTCT AATATTTGTTGTGGTGATCCTATGACAGGGCTCAAGAATTGGAGTTTATGGATCAAATTGCCCCCAATGGATTGTAGCAA TGGAGGTTAGGCACTTCCATGATCATTGCCTTCTCTATTTTTTTCTATTATTATTAATCCATCTCTAATGCTATCATAAT CATGTTTACGTTGGTATAGGCTTGTGCTTCTCAAAGCTTTATTTGTGTGCCTCTCTATGACACCCTTGGTAAGTACTTGT AGAATCAAAGAAATTTATGGTATTCTCACTTGTCTTTTTCTCTATTAGTGGTGCCCATTTTTCTGATGTAGTGTTAATTT ATCTAATTAAATTTCTGGTCCAATTGAAAGCAACATTTAAATTTCAAGATATCTTTTTGTTTTTTTTAATACAGGGCCTG GTGCTGTAAATTTTATCATAGATCATTCAGATGTAGATTTTGTTTTCATCCAAGATAAGAAGGTTAAAGAGGTAAGGATC AAGGACCACTTTCTTGAGATAAATAATAATGTTCAATTCTAGAGTGCATGTTTGAAAATATACTTCTCCAAATGATTTTA AAGTAAAAATCAATTTTGGTTCTGACTGAATCCTTCAACTGTTTGCAGCTTTTGAATCCTGATTGTAAATCAGCTCAGCG GCTGAAAGGTAAATTTACTAGCTTGTTTCAATTTCAGCATTATGTGCTACATCAGGAAAATGCATTAAATTAAGTTTGGT TATGGTTACAGCCATGGTGTGCTTCAGTTCATTAACAGAGGAAGAGAAAAAGAGGGCCTCCTCGATTGGAATTAAGTCAT TTTCATGGGACGAGTTCTTGCAAATGGTTGGTCTATCTGGAATTTGTCTTTTTTGTCTTCTTTTTATTATTTTAGATTGG AACTTTCAATTTGTTGAATGATCCCTTCAACCTATTTTTTGGAATTTATTTTGGAAGTTCTTTCAAAGAAAAAAATAATC ATAAATAGCACTATTTTTTAAAGAGTTTAAATTTGATACATTATCAATCATTTACACAGGCAACCAATAATTAAACGCCA AAACAGTTATATGTTTTGTTTTATTTTAATAAAATTAAAATCATACGTTTTAATGTGATGACTAATCCTTAAATGTTTGT GTAAGAAATTTTACACAAAGAGTATACTCATTAAATCTCTTTAAAATAAAGGATCCATATGTTTTAAATCTCTGTAAAAT ATAGCTAAATTGAATTTAGTCCTTCTAAAAATATTTCATATTTTTTAGTCCATATCATTAATGAAGTAGATGAAGTTAGT TTCTATAGTGCATTTTGTGACGATTTAAATTGTCACTAAACATTTTGTGGCGATTAAAATTTGTAATTAATGCACAAAAA TCATCACAAAATGAACATTATAAATCAATTCACATATTTTATTAATGTTATAGAATAAAAACTATGAAAAAAAATTTAGG TTGGTTTTACCTACTTGTATTTTTGTTTAAATTTTTGTGGCAATATATATATATATATATATATATATATATATTAGAGG ATGTATCTTATGAGAAATGTGATCTTACGTAAGAAAATGAAAATAAATTACGACCGTTAGATCTAATCATGAATGATCTA GATTAAAACATGAAATCACGTGACTTTTTAACCTTTTTAAAAAAGTCACGTGACTTTTTTAAATGATCACATTACCATTA ATTTGATTTAATCTGAACCATTCATTATTAGATCTAACGGTCGTGATTTATTCTCATTTTCTCACATAAGATCACTTTTC TCATAAGATACATCTCATATATATACATATATATATATATATATATATATATATATACACACACACACACTTCACTTTCT AAAATTATCTAGACGTGGGTAACTTGTGCTCTTCGCCTCATCCTCTTTTGGAAACGGCGTTGCCCATATGGAGCCCCTCT TAATGTTTTATATATATATATATATATATATATATATATATATATACACACTTCACTTTCTAAAATTATCTAGACGTGGG TAATTTGTGCTCTTCGCCTCTTCCTCTTTTGGAAACGGCGTTGCCCATATGGGGCCCCTCTTAATGTTTTTGCCCTTTTA TGTGATAAATCATAAATGTAATCCCACAAAGGTTTTCATAAACTTACCAAAGAATGAAATATCTAATCAAGAGGGTTGGG ACCAGAGTCATGGTCACTCAGTAGAGAAATAAATGATGTGGAAATAGTGAAATGAATTCCTCCTTTTTTTTTCCTTCTAA TTTGGGTAATATGAATAACTTATATTATCTTATAGGGGAAAGAAAACCCGTCAAGTATAGTTCCACCTCAGGCTCATAAT ACATGCACAATCATGTACACAAGTGGGACAAGTGGAGAACCAAAAGGTGTTGTTTTATCGCATGAAAATGTAGTGGCTTT AGTAAGAGGAATGGATCTTTTCATGGAACAATTTGAAGACAAGGTAAATCCAATTTTGGATACATATATAGTTCATCCAC TACATTCTTCTTAATTTCCTATGAATACTATATAATTTATCTAAGACTAAACAATGTGTATTTTACATTGCATAGATGAC AGTGAACGATGTGTATTTATCGTTCCTCCCATTAGCTCATATCCTTGATCGCACAATTGAGGAGTATTTTTTCAGAAAGG GTGCATCTGTTGGCTACTATCATGGGGTACGTTTGTCCACACACATAATTTTTTAAAACTTGCATTTACACATAATTTCA AATACAAATTTTTCTTTTAAGTTTATCAAACTTAATTTTATCCACATTTAAAAGAAATGGACCCTAGTGTCGATGAGCTA ATGAGGGTAGAGCAAACGCAACACTATTATGCTAAAAGATATCTAAAATGAACATATCTTATTATGCCCTAGGAGCTCGG CGAGTTCCCAATTAATGTTACAATCAGAGGGAGAATTAAGAAACTTGCCTAAAGAGTAGCGAGTTACATTAGTTAACAAA ACTTGATGGGGATACTAACAAGGTGTAGCACAACTGGTAGATAGTTGGACTCCTTAAGCAGTTAATTCAAGGTTCGATTC CTGGGTGGTGCGTATGGAGAAGCATTTGTTGGGAGAGGCCTACCCACTTAACGTGATCTCAGAGCCTCGGGGGATTACTC TCATGACTGTCGGCTGTGGGGATACCTTGGGAAACCAAAAAAAAAAAAAAAACCTAGGGATTTACCTTATATGGGGAGTT AATTGGAGGGGTGGTCCTATCAAGTCTTTAAGATGGTGGGAAGAGGGGTTGATTCTTTATAAACAGCCTTATGGCTTAAA AGTGGGATAAATTGTGACGTCTTCTGGTGGAAAGACAGTCTTTCTCCTTGCCTGACTTTGTTTGGTTCCAGGATGTCTTG TTGGGCCGCTTTAGGGAAATCTGGTCCACTCCAAATCTATGAAGTTCCATAAACAGATTTACAAATTATAGGACAGACTG GAATCATTGTAAATACAACAAAAAATTATTAGTAAAAGTTCAAAAAATTGTAAAATATCCCAAGATAAAAAAAACCAAAT TAAGTTTTGATAGGTTCCCATGTCAAATTTCATCTGTCTGAGTAAGTGCACGAGATACTAATTCTGTAAATAGGGACCAT AATGAAGTATCAATTGGTGACTGATCAACTCACTTGTTCTACTAATAATAAATGTATACTCCATAATGAGTATTTTATTT ACTTTTGTTATTTAAATCTTTTGCATGAAGGATCTGAATGCTTTGAGGGATGATTTAATGGAGTTAAAGCCAACACTGTT TGCTGGTGTCCCCCGGGTTTTTGAGAAAGTTTATGAAGGCAAGGTTACTTTCATTGTTTATCTGATTAATTTCATGAGAA GAATTTATTGTTTTGTGATTAGTTTCATGATAACTTAATCAAGAATACTTGTTTCAGGTATCAAGAAAGCAGTTTCAGAG CTCAATCCAGTGAGGAGAAAAGCCTTTGACATCCTCTACAACTAGTAAGTTGCTATTCCATAATCTATAGTAATGGGAAA AGGTACAACTATTTTTACTCACTGAGATAATGGAATTTGGTTAATTAATTCACATTTTTTATGATGCAGCAAACTTGGTT GGATGAAAAAAGGATATAAACAGAGAAATGCATCACCATTAGCAGATCTATTAGCCTTCAGAAAGGTTTATATCTCTTCT TTAATACTTTCACCTCAAAACTAACAGTCTGATCACAATCACTAGTTGTACTATGGACACCTTCAACTACTTAAAAATGG ATTAGGATCTTTTGGTGTCTCATTCCTTGCCTCACCGATAAGATTGTGGCGTTCTTTTACCCCGCCATTATAGGTCAAAG CTAGGCTAGGAGGGCGTGTTCGATTAATAATATCTGGAGGAGCAGCCTTGAGCCCTGAGGTGGAGGAATTCTTGCGCGTC ACTTCTTGTGCATTTGTATGCCAAGGTTATGGTAAGTAAAAGTCCTTTTGGTTTACTGTTATGAAGTATGGAAACGGAAA AATAGGACATCATGATGCACTTTTTATTGAAGAAGCAACTAGCAACTTACAATGTAATGATATGGTTAATCCAGGTTTGA CAGAAACAAGTGGAGCCACAACTACTGCATTTCCTGATGAAATGTGCATGAGTGGAACTGTTGGTGTTGTATCTGTATAC AATGAAATTCGGTTGGAGGAGGTTCCAGAGATGGATTACAATCCTCTTGGAACTCCTCCATGTGGTGAGATATGTGTGAG AGGGAAAACTGTTTTCACTGGCTACCACAAAAGTCCTGAGTTAACAAGAGAGGTCATTAGAGATGGATGGTTTCACACAG GGGACATAGGAGAAATTCTTCCTAATGGTGTCGTTAAGATCGTTGACAGGAAGAAGAATCTTGTTAAGCTTTCTCAAGGA GAATATATAGCACTTGAGCATCTGGAAAATGTTTATGGAATCACTCCAATAGTTGAAGATGTGAGTAATTTGAGTCTTTA AACTCTGGTGTTAGTCTAGCTAAGTTTGTGATTTATTTGATGCATGTTTTGCTGTAGATATGGGTTTATGGGAACAGCTT CAAGTCAATGCTGGTTGCAGTTGTAGTTCCAAATGAAGAATTTACCAATAAGTGGGCATATTTAAATGGTCACATAGCTC CTTTCTCCCAACTCTGCTCTCTTGACCAATTGAAGACATATGTGCTTTCTGAGCTCAAGTCCACTGCTCAGAGAAACAAG GTAACAGTAACATCTATATTCTATATCCAATTTTATGTGATAAATACTGTTAAGATGAAAAAAGAAGCTTAATTTATTAA AAAAACACTTCAAATTAAAACACTTAAAATTATGTTTTTTTGAATGTTTTACTAGCTGAGGGGCTTTGAAAATATCAAAG GGGTCATAATAGACCCGCGTCCATTTGACATGGAAAGAGACTTGGTGACTGCAACACTAAAGAAGAAGAGAAACAACATG CTCAAGTATTATCAGGTAACAGGATCATATCCCCTTAGTTTTTTTTCCTTACTCTTTATGCAATCTGTTTAAGAATTTAC ATGTAATAAACTTGCTAACAAAATTGTTGACATTGTAACAGATGGAGATAGATGAACTATACCAGAGTTTGACCGGACAG AAGCACAAAATTTGAGGTTGCTAGACATGGATATGCCTATTTAGTAGTCCTCTGTATCAGTTATTCCTGTTGCCAAAACT ACCACCTGTATCCTCCTAGTATCCAGTGCTATCATTTGTTGTAAAAAAAATAGTGTGCGTGTTCTATCCATTTCCCATGG AGACTTTATGAGTGAGACATGAATAATAACAGATAATTTGTTTCAAAAATATTTAGAACCAACAGTA
CDS sequence (LotjaGi5g1v0242500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAGACCTTCGCAGCTAAGGTTGAGGAAGGAATAGAAGGTAAAAATGGCATACTATCTCTTGGTCCAGTGTACAG GAACCTTCTCTCCAAAAATGACTTTCCTCCAATGGATCCTGATTTCAGCACCGCTTGGGATATTTTCAGTGTATCCGTGA AAAATCATCCACAAAATCGGATGCTTGGATGGCGTGAAATTGTTGATGGAAATATAGGACCATATGTTTGGAAGACATAC AAGGATGTTTATGATGAGGTTCTGCATATTGGCTCTGCTTTAAGAGCATCTGGTGCTGAAGCTGGCTCAAGAATTGGAGT TTATGGATCAAATTGCCCCCAATGGATTGTAGCAATGGAGGCTTGTGCTTCTCAAAGCTTTATTTGTGTGCCTCTCTATG ACACCCTTGGGCCTGGTGCTGTAAATTTTATCATAGATCATTCAGATGTAGATTTTGTTTTCATCCAAGATAAGAAGGTT AAAGAGCTTTTGAATCCTGATTGTAAATCAGCTCAGCGGCTGAAAGCCATGGTGTGCTTCAGTTCATTAACAGAGGAAGA GAAAAAGAGGGCCTCCTCGATTGGAATTAAGTCATTTTCATGGGACGAGTTCTTGCAAATGGGGAAAGAAAACCCGTCAA GTATAGTTCCACCTCAGGCTCATAATACATGCACAATCATGTACACAAGTGGGACAAGTGGAGAACCAAAAGGTGTTGTT TTATCGCATGAAAATGTAGTGGCTTTAGTAAGAGGAATGGATCTTTTCATGGAACAATTTGAAGACAAGATGACAGTGAA CGATGTGTATTTATCGTTCCTCCCATTAGCTCATATCCTTGATCGCACAATTGAGGAGTATTTTTTCAGAAAGGGTGCAT CTGTTGGCTACTATCATGGGGATCTGAATGCTTTGAGGGATGATTTAATGGAGTTAAAGCCAACACTGTTTGCTGGTGTC CCCCGGGTTTTTGAGAAAGTTTATGAAGGTATCAAGAAAGCAGTTTCAGAGCTCAATCCAGTGAGGAGAAAAGCCTTTGA CATCCTCTACAACTACAAACTTGGTTGGATGAAAAAAGGATATAAACAGAGAAATGCATCACCATTAGCAGATCTATTAG CCTTCAGAAAGGTCAAAGCTAGGCTAGGAGGGCGTGTTCGATTAATAATATCTGGAGGAGCAGCCTTGAGCCCTGAGGTG GAGGAATTCTTGCGCGTCACTTCTTGTGCATTTGTATGCCAAGGTTATGGTTTGACAGAAACAAGTGGAGCCACAACTAC TGCATTTCCTGATGAAATGTGCATGAGTGGAACTGTTGGTGTTGTATCTGTATACAATGAAATTCGGTTGGAGGAGGTTC CAGAGATGGATTACAATCCTCTTGGAACTCCTCCATGTGGTGAGATATGTGTGAGAGGGAAAACTGTTTTCACTGGCTAC CACAAAAGTCCTGAGTTAACAAGAGAGGTCATTAGAGATGGATGGTTTCACACAGGGGACATAGGAGAAATTCTTCCTAA TGGTGTCGTTAAGATCGTTGACAGGAAGAAGAATCTTGTTAAGCTTTCTCAAGGAGAATATATAGCACTTGAGCATCTGG AAAATGTTTATGGAATCACTCCAATAGTTGAAGATATATGGGTTTATGGGAACAGCTTCAAGTCAATGCTGGTTGCAGTT GTAGTTCCAAATGAAGAATTTACCAATAAGTGGGCATATTTAAATGGTCACATAGCTCCTTTCTCCCAACTCTGCTCTCT TGACCAATTGAAGACATATGTGCTTTCTGAGCTCAAGTCCACTGCTCAGAGAAACAAGCTGAGGGGCTTTGAAAATATCA AAGGGGTCATAATAGACCCGCGTCCATTTGACATGGAAAGAGACTTGGTGACTGCAACACTAAAGAAGAAGAGAAACAAC ATGCTCAAGTATTATCAGATGGAGATAGATGAACTATACCAGAGTTTGACCGGACAGAAGCACAAAATTTGA
Protein sequence (LotjaGi5g1v0242500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKTFAAKVEEGIEGKNGILSLGPVYRNLLSKNDFPPMDPDFSTAWDIFSVSVKNHPQNRMLGWREIVDGNIGPYVWKTY KDVYDEVLHIGSALRASGAEAGSRIGVYGSNCPQWIVAMEACASQSFICVPLYDTLGPGAVNFIIDHSDVDFVFIQDKKV KELLNPDCKSAQRLKAMVCFSSLTEEEKKRASSIGIKSFSWDEFLQMGKENPSSIVPPQAHNTCTIMYTSGTSGEPKGVV LSHENVVALVRGMDLFMEQFEDKMTVNDVYLSFLPLAHILDRTIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLFAGV PRVFEKVYEGIKKAVSELNPVRRKAFDILYNYKLGWMKKGYKQRNASPLADLLAFRKVKARLGGRVRLIISGGAALSPEV EEFLRVTSCAFVCQGYGLTETSGATTTAFPDEMCMSGTVGVVSVYNEIRLEEVPEMDYNPLGTPPCGEICVRGKTVFTGY HKSPELTREVIRDGWFHTGDIGEILPNGVVKIVDRKKNLVKLSQGEYIALEHLENVYGITPIVEDIWVYGNSFKSMLVAV VVPNEEFTNKWAYLNGHIAPFSQLCSLDQLKTYVLSELKSTAQRNKLRGFENIKGVIIDPRPFDMERDLVTATLKKKRNN MLKYYQMEIDELYQSLTGQKHKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 660 | 658 | 0.0 | – | |
| PANTHER | 3 | 660 | 658 | 0.0 | – | |
| SUPERFAMILY | 37 | 655 | 619 | 1.24E-110 | – | |
| Gene3D | 41 | 346 | 306 | 4.0E-44 | ||
| Pfam | 55 | 523 | 469 | 6.1E-102 | ||
| CDD | 73 | 653 | 581 | 0.0 | – | |
| ProSitePatterns | 226 | 237 | 12 | - | ||
| Gene3D | 366 | 515 | 150 | 4.4E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0242500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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