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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0245800 |
| Transcript ID | LotjaGi5g1v0245800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress family protein; TAIR: AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T5G2|I3T5G2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0245800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55405098..55407816) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAGATCTAACAATATCAGTGGGTTAATCGTCATTATGTTGACTTGAGTGAAACTTCTGTATTTTGAAAACTAGGAC AAAGAATCCACGGGTTTAAGCTTCAAACCCGACTGTACAATCCAGGATCCACATGATGAATCTTCTATATAATAGAATCC TTTGCATCTCTTATCCACAATTCAAAGCCAACAACAACTTTGTTAAGCTAAGCTAAGATAAGATAAGCTACTCATTATAA TGGAAACGAAAGAGCGGAAGACTTTGGTTGCTGTGGATGAGAGCAAAGAGAGCATGCATGCACTGTCCTGGTGCATCAGC AATCTTATTTCTGAAAACAACAACAACAATAAAATCCACAACAACCTTGTTCTCCTCTATGTTAGACCACCTTCTGCTGT CTACTCCTTGGATGCTGCAGGTAATTTAATTTAATTAATATCACTTCATTTATTTAATTTGAGTTTATTTTGCAAATATT ATTCTGTACCTTCTAAATTCCTCATGAATTTTCACTAACTTTACAGGGTACATATTTTCTGATGACATGATTGATGCTAT TGAAAAGTACAATATGCAGTTAGCTAATTCAGTTATGAGACGAGCTGAAGATATTTGTGGAAACTTGAATGCTTCCAATG TAGGCTACCTTATCTCAGTCTATTTTTTTTCTTCATTTTATTTGTCTTTGAAAGTGGGCTTCGCAATATAGTAAGGTTGC TGTCATGTGAGTGCGATCACAGATTCGAGCCGTGTAATCAGAGTATCGGACTCTTAGCGGTCAAAGGTTCGAGCCGTGTA ATGAATTTAGGATTTTGCAGATAAAGGTGGAGAAAGTAGTTGGGACAGGAGATGCCAAGAATGTTATCTGTAGTGCAGTG AAGAAACTAGGGGCTGACACCTTGGTCCTGGGAAGTCATGACTATGGCTTCTTTAAGAGGTAATGTCATTGATTTAGTTC TTTTATTTATTTTTAGGTTCGTTTATGAATTGTTACATATGATGAAATGAAGGTTGTAATAGGATAACTAACTTTGTTCT TGCCAATTTGCAGGGCACTACTTGGAAGTGTGAGTGATCATTGTGCCAAAAATGCAAAGTGTCCTGTTGTAATTGTGAAG CACCCATAAAAGAAACTGGTTTCCTTTAGGTCTCTGTTCAACTAAAACACATCCACCATGTTGTTGCCTATAATTTATTT AAATGTAATTTGCACTTTGTTTAATACAAATCTACAAGTATTTGGTACTTTGATAAGGGAGAAAACAGTCCCTAGCGCAT ATTTTCCAAGGTTCCTTATAGAAAATTCATCAGTTGAGAGAGGAACTCAATTCTACAAAAAACAAAAACAAAACAAAATC TGAATAAGAATTATAAACTGTACTAATATTAACTGAAAGCTGAAGGAATACAGTCCAAAATATTTCTGATGTACTCTCTT TACAACAAATTGCTTTCAAATGCTATGTATCTCCAAAGAGAGGCAAAGTTCCCAAATGTTGGAAATCACTAACCACATGT TTGTAGTTAATTCAATTAAGAACCTATTTGATTTACCGTTAGAAAGTATGAAAAATGAAAAAATACATCCCGATGTTGAA TTAGCAACTTACTTCTTTAACAAAAAGTGACTCGGGATGTAAAAATTGAGAGAAAAACTGTAAGGAAATGAATGTGATGA ATGAATCAGAATCACTGAAGTAACTGTTTCTGTTACCTCTTCTTTATTTATATCTGGTAAACCTAACAAGCATGGCTTTA CAATGTGATTAGCACATGCTAACAGCTAAACAGAATAACTACTAACAGAAAAACTAAAACCAGAATTGGAGGGAAAAGCT TAACTAACTAGACTGAAAGTAAGATATTGCTACTGCTTCTTATTAACTAATTAACTAAGCTATATAATCGTGACACCCCC CTCAAGCTGCAATGTATATGTCTAACAGTCGAAGCTTGTCAAGTTCTGATGAAATGGCCCAACAGGAAGATGTTTTGTTA GAATATAAGCAGCTTGAGAGACTTGACAAGGAGCAATTGAAGTGTGCCTTCAAGGGCCTTATCTCTCACTAAATAGCAAT CTATTTCAAGGTGCTTTGTACGCTCATGAAAGACAGGATCGTGAGCATTGTGCACAGCTGATTTTATTGTCACAATAAAG ACTAACAGGAGCATAATCAAAGATGTTGAAATCCTTAAGTAAATCAAAGATGTTGAAAAAGAATGAGACACAATGGTTGT TTCTTGGTTTTCTATGAGATTAATGATGATCCTAAGAAAAAACAGAAACCTGTAATAGATCTTTGTTTATCTGGACAAGC TCCCCAGTCGGAATCTGGGAAACCTGTCAATTTAAGAGAAGGCTGTGCAGAAAAAAATAAGCCACTTCCAGGATTTTCCT TGAGATATCTAAGAATCCTTAAAGCTGCCTAGAAATGTAGTGTAGTAGGAGATGCTAAAAACTGGTTTAGTCTTCCCACA ACTATGAGATATCAGGTATAGAATTAATTAGATAAATCAACCTTCCCAAGAGTGTTCTATACACTGTTGGATCGAGAAGA GGATCTCCTAATCCTTTGTGCAATTTGACCATTGAATCCATGGGTGTGTAGCAAAGCTTTGCTGCCAAAAGACCACTGTC TTGTAACAAATCAGGGGTGTACTACTTCCTTTGGTGTTAAGCAATTCCCTCTTTGCTCCTTGCAATTTCAAAACCTACG
CDS sequence (LotjaGi5g1v0245800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACGAAAGAGCGGAAGACTTTGGTTGCTGTGGATGAGAGCAAAGAGAGCATGCATGCACTGTCCTGGTGCATCAG CAATCTTATTTCTGAAAACAACAACAACAATAAAATCCACAACAACCTTGTTCTCCTCTATGTTAGACCACCTTCTGCTG TCTACTCCTTGGATGCTGCAGGGTACATATTTTCTGATGACATGATTGATGCTATTGAAAAGTACAATATGCAGTTAGCT AATTCAGTTATGAGACGAGCTGAAGATATTTGTGGAAACTTGAATGCTTCCAATATAAAGGTGGAGAAAGTAGTTGGGAC AGGAGATGCCAAGAATGTTATCTGTAGTGCAGTGAAGAAACTAGGGGCTGACACCTTGGTCCTGGGAAGTCATGACTATG GCTTCTTTAAGAGGGCACTACTTGGAAGTGTGAGTGATCATTGTGCCAAAAATGCAAAGTGTCCTGTTGTAATTGTGAAG CACCCATAA
Protein sequence (LotjaGi5g1v0245800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METKERKTLVAVDESKESMHALSWCISNLISENNNNNKIHNNLVLLYVRPPSAVYSLDAAGYIFSDDMIDAIEKYNMQLA NSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVLGSHDYGFFKRALLGSVSDHCAKNAKCPVVIVK HP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 162 | 162 | 2.7E-39 | ||
| PANTHER | 3 | 162 | 160 | 3.7E-77 | – | |
| PANTHER | 3 | 162 | 160 | 3.7E-77 | – | |
| PRINTS | 5 | 23 | 19 | 9.3E-15 | ||
| SUPERFAMILY | 6 | 161 | 156 | 4.02E-32 | – | |
| Pfam | 6 | 160 | 155 | 2.2E-26 | ||
| CDD | 9 | 159 | 151 | 5.5038E-26 | – | |
| PRINTS | 120 | 132 | 13 | 9.3E-15 | ||
| PRINTS | 138 | 160 | 23 | 9.3E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0245800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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