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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0249800 |
| Transcript ID | LotjaGi5g1v0249800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF538 family protein (Protein of unknown function, DUF538); TAIR: AT1G02816.1 pectinesterase (Protein of unknown function, DUF538); Swiss-Prot: sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610; TrEMBL-Plants: tr|I3T2W4|I3T2W4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0249800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55825405..55832285) extracted from Lotus japonicus Gifu genome v1.2.
CGCTCATCAAAATATATCATAATAAATATCCTCTAGCAAATATCTCAACAATATTTATAATTTCACATGAGTGTCCCAAC ATAATTAACCAGTTCAGTTTCAATCCAATTCCAATTTTCCAATAATAGGGTGCAGATGATGCCTGCGACCCTTCTCCTCC TTCTCCTCCTCTCGGTGCCGCTTCTCTCCTCCGCCTCCTCCGCCGCTGCACCGTCAGCATACGAGGCGCTAGCAGGTTTC AACTTCCCGGCGGGCCTTCTCCCCAAAGGAGTAACAGCCTACGAACTCGACGAATCCACCGGCAAATTCCGCGCAGATCT GAACGGTTCCTGCAGCTTCACCCTCGAGGGTTCATACCAGTTGAGCTACAATTCAACCATCACCGGCCGCATATCGGACA ACAGGCTCACCGATCTGAGGGGAATCAGCGTCAAGGTCCTCTTTTTCTGGCTCAACATTCTCGAGGTGGTTCGGAGCTCC GATCAACTCGATTTCTCCGTCGGTATCTCCTCTGCATCTTTTCCCTTAGATAGCTTTTTCGTTTCCCCCATGTGTGGTTG TGGATTGGACTGCGATTTGATTCGAATTAGGAAATTCAAATCGGATAGAAACCCTTCTCTTTCCTCTTTCTAGAAGGAAA AAAAAACTGTATATCAATTTCAATTATATGATTCTGTTATGTTGTTCAGTGCTGCAGGGTGCTTCTTCACTATATAGTCT GAGATGTCATTGTAATGTTTAGTACAATGTTCATTGTTAGTTATAAGTTAGGGATATACTTTGTGTAATTTAGTACCCCT TTGTTTGTTGTCTCTTGTTGTTGTATGTTGATTCAAGCATGTAAGATAATATATTTGTGCCAGTTTTGTTTCATGGTATC ATCTGTTTTATTGGTTGAGCACTATGTTATATAATTGATTGATTCTTAAGCTAGCCAAAATCAATTGAGAAGAAATTTAT GTGAATGAATAGCTTTGGAGTTGATAAGCTGATGATACAATGCAAGCATACTATATAAATCTGTTTACATCATTTGGAAT TTGCTGTCATGAATAGCTGAAATGCTGATGGCATTAGCCCATTATCTCCAATTATTGTTAGTGGTGGGATTAACACTTGG TGACTATACCCTAGCTGAAATGTGATTAGTGAATGTTAGCATTATTGACATGATCAGCTATGTTGATACATAAGATTTTG AGCTCAACTCCTATTGATAACATCTTATTTTGTACTTATTAAACTTCTTAAATTATTAATTCACTGAAAAAAGATTTTTG CTTTATAGATTTCTCCACAAAGGTGACATTTCTGTTAAATAGAAAAGGTTGATAATACTAGAAACCAATGTATTTTCTTG TTGCAATAGGATTGAAGATTTGTTATTTGGTCAAAGCACAGAATTGAAGTTCAGTGAGCAAAATTTGAAAAATTGAGTTT TAAACTTTTAAAATTTTAATGTGCATTTAGGGCTCTGAGCCTCTTTGCTCTAAGAATCATGGGCATTTGGACTGATACTG ATAGGCCTATATCTTTCCACTTTGGAGTGTTTCTTCTGCAACCATTTTTATGTGGCCACAAGTCCACAACTAAATACTTC ATTCACAACCCTAAACTTATCGGGGGATAAAAACCCTAAACTTATCATTCCCTTTTTTTTAATATCTCAAAAATACCTCT CACTATCATCATACCTTCAACCCTCTCCTCAACCATTTCACAATCTCTTCACACCATTCTCCTCATCAACTTTCTTCATC ATTCATTTCACCATCCTCTCCAACGTTCTCCTCATAACACCCCTCACTGCTTTCTTCTCCAACATTCACTACTACTTTCT CCACCACCATTCTCCAACCCATTGACCACCATTCTTCCTTTTGTGGCGGCAATGACGAAGTGTCTATAGTCCTAGGTGAA TCACGACTTTGATCTTCCGAATTGAAATTTACGTAGTTTTATGATCTCCCCAACGGGTGTTGTCCCTAGGAGCATCTGAA TAATTAAGCTCTTCATAAAAATAAAAATAAAATAAAGAAGATCTTGGTTTATGTAGAACTAATACTTAAATATCCTCATT CGCCAATGACTAGAGATGCTTCATACCATAATGTCCACTTCCGCTTGGAATCTATTGCTTTTTGTTAAACCGTGAGAATT TATGTGTCTTCAGACAGAGTTGTAGAATAAATCAATCAATTAAATATTACAAACCAATTAATAAAATTATCACCACCGTC ATGTATAATCTATACTAGATACAAAACACAAGCCTCTTCCAACGACAAAATAACGACGTGTCGTTACCACAGCAATTTAC CACGCGTCACATTAGCATCCTGCTTTCGGTTTTCCTTATTTCAATGGAGTTATATGTTTTGTCCCACTGTGGATATGTAT ATGTTTTGACTGTGTTCTGTTTCCTTCCCCGTTTTCTCCTTGCAAGAACCACAGAACTACTGTAACCTTCCCCGTTTTCT CCTGTTTGTCAGTAAAGTCAAGGAGCACGAATTCGACAAATTGTGGGAATTGGAAACTTTTGAAATTCAAATTGAATCAC TTTTATCTCTCTCTCTCTCTCTCTCCATATTTGTTTTCAAATTCTGGATCTGTCTCAAAATTATTTTCCTCTTCCTGCTC CGGAAACTCATCTCACCTTCTTTCTCTGCTAATGGTGGCGCTAGATCATCAACGACCGTGCATACCTTCCTTGCACCGCC ACCGCTCCCTCCCACGCCCAGCCGCCGCCGGCTGTAGGCCCCCTCTCCCTCTCTCACTCCCAGCCGCTCTCTTGCTCTCT CTCTCCCTCTGCAGATCTTCAATCGCGCCCAAATCTCCAGATCTCGCGCGTCCTCTCCCTCGAAGCCACACACAACAACT TTCAAACCCCGGTGCTTCCGAAAAATCCATCGGTAAGATCTTCTCCTTCTCCTCCTCCTCCCTTTTGCTCATTTATCTTT GACCATTTTCTTCTTTCAATCGTTTTTGTTTTTCTTCTTCTCCTTTGTTTCATATATCAGAACAAGAGAGAGAGAGAGTG GGAATGATAAGTTAGATTATAGTTTCTGGTTTTGTATTGTGTTTTGTCTTAATATATAAGAAGCTAGCTATTTCAATTTT TGGAGTCTTTGCTGTTATCTTCATGTAAAGTAATATGTGAAGAGTCTTTCTATATATGCATGTCTAATCAGATTTTGTCA GCGGTTTTAGCAACCATGGTGAATGAGTTTAGTTTCTGCATTCATTTTTCAGGGTATTGGTATTAAGGAAAGGTATCACC TTGTGCTGAGACAGAAGCTTTCAGGGTTCTTTGTGAATTTTTTTAGAGCTTTTGATTTCTATCTGGGGCCTGGAGTTTGG AGGTATGGATCTATATTTTTCTATCTTATCCTCTTCGAAAGACAGTTATGTTTTTATTATCAAATCTATATTTTTATTAT ATTTAGGTTGTTAACAAAGATGTTGGAAAAACACCAGGTATGAGGTATTTTGTCTCTCAGAATCATGATGTTGGAAAAAG TGCCGACTTGACTGATATATAAGGTTCTGTTTGCAGAGCTTGATAGGTGAAGATGCTAACATATGGAGAATCCAGAATTC ACTTGAAGAGGGTATTGCAAGTCGGGACTGTGTGATCCTGTTAATTCCTCACCATGATGTTTTGTCATGCTTTATTATGT AATTTGGCATTCTTAGTAAAACCTTGGTTTTTTTTTCCTGTAAATTTTGCAGGGCTTTTCCATCGGATCGAAATGCACAG ATTGAAAGCATTTTGACAGAGCATTGCAGATCGATGAACTCTTACATGTGATATGGACGGATCTTTAGCCTTTTCATGGA TCACGAACATGGAACTTTGAGCTCCATCAGATATGGTCGGTTCATGCTTCCTAAATCTGGGTTTTGTTGAAATGAGGGGT TCGTATTATTATTTCCTTCCCTGACACAAGATGTTTGGACTTCTGGTCTTGAGCATAGTTTTATTTAGTCTGGTCATATT CATATCAGCTAAATTCCCTTGCTGTAACTCATAACTATAGTTAGCTTTGTCTAATGCTAATCATCTTGCCTTCGCTTGGG CAGCCTGAAGATCTGTATATCTCAAGACTGAGAGATTAAAGATGATATGTCTAAAGGAGGAGAAAAAACCTGAAGAGAGG AAAGCTCATGCTCTGTTTGAGGTGAGTTTCTGTTTGATCACTGGAGCATCCTTATTTTGATTATCTTCAATGGTCTAAGT GTTGCTTAAAACTAGCTATAAGAATCGTGCAATTTCATGAAGCTACTGTCTCCATTAGATTTACTGTCATTGGTTCTCAG GAGGACAAGTACAAGTGCTTACAAAGGACAAGTGCTTAAGGAGGACAAAAATCTGACGTGTCCTTAGCTGAGCACCCCTC CACGTGTCATATTCTCACCCCTCCACGTGTCATATTCTCAGACGGTTTTATATGGAAGTCCTTTTAGTCTTCACTTTAGC AGAACCCGTTTGTTGATGCTTTCCCATTTCGTTGGCCACAGATTTGCTCAATGTCAATTACGGGTCTCGCACAAATCAAA TTTCTTGGCGCTATAGATCTCCAGTTGTATAAATTCAGTCCAAGCCAAGCGTATCAACCACACTCATTCACAAACAAAGC AATTCACAAATCGACTCCCACCACCACCGAAACCCCCAACCATCTCGCCGTCGCCAGAAAAAGCGACTTGCGATTCGAGA ACCCCATCCTCAACTCGCTCGACTCCAAATTGAACGGTCTCTTGGCTGAAGCCTCTTCCGAAGAAAATCCGGCCAGTCCA CGGTTCATTTTTTTTCACCAGAGACCTTCACACTCAATTGTGCTTTTACGATGAGACTATTGTTCAAATGATCGAAAAGA AAGGGAGATTGTGAAAGATGAATTCTAGCAAGGAAGTGGCTTACTGATTTGGCTTATGGTATGTCTGTTGTTTGATTATC TGCTATGGACAAATTCTAATGCCATCCTCTCCACCCTGGCTGCCTTTATTTTGGATTTGCTGAAAATTGTTTGTTTTCTC TGCACTGTCATTTCCTAAAATCTCTCGCTATTCCCCTAATAGGGTCCCTATCCTCTTCAATGTCTTTTTACCTCGATTGG ATTTCAAATTTTGGGAAAAAAAAATACCAATTGGATTTCTGAGAATGTGATCATTGAACATTTCCTTTCTTGGTGGAATT TTAGTATTATCCATCTTTTCTCATTCTGCATATGGAATTGGTTTTCCTTAGTATTTAGATGTGTTTATACTATGATTTAA TATTTTACCCAATTAACACTTTATTTTATTGGCACTGATGGCTAAGAATGAAGAAGAAGAATTCAACACTAGACCACTAT CTGTTCTGATGATGAGTATTAAAAATGATACTCATGTATGTTTTTTTAACATTAGATAGTAACATGGATTCTGAGGCAGC CCCTAGAAGGCATTTTATGTCTGAGGTTTTAACCAGACACTTTAACTTCAGTAGCAAGAAGCTTCTGGGTCGTGGCATGG CTTTTCATAGGCACCGCAACATGGTTCAGGATCAAAATTTTAAAAATAGTTTATTCGATGAGTAAGCTATGCAATTTTAT TCACAAATGTGCAATTTTATCTGATCATATATTCTTTCTTTGGATTCTATTCTAATGCCAAAACATCTTGCCTTTGTAGA AACTAAATAGTGAAGAAGCAAGAATCAAATAATCATCCAGCCAACTGCTGAACCTGAAAGTACAATTTTTCGAAATCAGA TTGGAAATGTCCTTTGCAGTATGCAGGTGGGAATCTTTATCTGAATTTGCAGGTGCTGTTTTATGATGTTCATATGGAAA TTTAGGCTGTTAAATGCTCAAATCCTGAGTTACCATGCATTTGTAAGAAGAGATTCATGTGTGTTGGCCGATACTGTTAG GATAATGAAGATGAGTTGAGGTAGGTAGTTGGAATTAGCAAGGTGGGTTAGTTAGTTTTAGAAGAGATTAGTTAGTTGTA GCTAAATAGAGAAAATTAGGATGGAGAGTCATTCTCTCTGATTTTTAAAATGTGTGAAAGGAGAAGTCCATTATTGAAGC CCCATGGATGAGAGCTATCTATCCTGTTTTTAATCAGTCAATAAACATGCTAATTGCTTTTCAATATTTTTTAATAACTT CCCTTTTTTCATCTTTTATGTTGAAGCTACAAGAGGAAGATACACTTACTGCCTCCTTACACCATTTTTTCCACTTATTT CAGGAACAACTTTTTGAATGATTTGCCTTCCTTGGATCCAGAATTATGTGTTCATCTTAATTTTCTATATTTTCCATAAC TAAATTAAGCTGGAGAAATAATACATCTTATATGTCTAGATGGTTTACTTGATGAACATTATTAAGAGGAATATTAAATG TGATGTTTAGAACGATGAAATAATCTTGTGGTTTTCTAGGGTATTTTCCAGATAAAATACTAGGTTTTATAAATAGTTTC CATTTATTTGCTGCACACATGTATTCTGCTGGACCAATTGAATGGTTTATCATGTTCAATTGACGCTCTCTGGTTTATCC AATCTGGTTTGCTTCTCCTTTCTCAGTCTTGATCATTTCCCTAACAGTTTCTTTCTTTGATTGGGTCACACAGCTACTAT CCCATTCTGATAAATGGCCTGTTTAACAAATTGCTGCAATTTCCTTGGCCACTTGGTTGAGAAGAGTAAGAAAGCCTTCC AAAATCATATTCTATAATTCTTTGAAGAATGATAAAGACATCGGTTCTTATCTTAATATGGTTCTAAAAGATTGCAAACA CTTTGCTCAATCCCTTCATTGGTGTCAATCAGTGCATGTCAAGAGACAAATATTCACATTAAAATATGGCTCTCATAGGG A
CDS sequence (LotjaGi5g1v0249800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCCTGCGACCCTTCTCCTCCTTCTCCTCCTCTCGGTGCCGCTTCTCTCCTCCGCCTCCTCCGCCGCTGCACCGTC AGCATACGAGGCGCTAGCAGGTTTCAACTTCCCGGCGGGCCTTCTCCCCAAAGGAGTAACAGCCTACGAACTCGACGAAT CCACCGGCAAATTCCGCGCAGATCTGAACGGTTCCTGCAGCTTCACCCTCGAGGGTTCATACCAGTTGAGCTACAATTCA ACCATCACCGGCCGCATATCGGACAACAGGCTCACCGATCTGAGGGGAATCAGCGTCAAGGTCCTCTTTTTCTGGCTCAA CATTCTCGAGGTGGTTCGGAGCTCCGATCAACTCGATTTCTCCGTCGGTATCTCCTCTGCATCTTTTCCCTTAGATAGCT TTTTCGTTTCCCCCATGTGTGGTTGTGGATTGGACTGCGATTTGATTCGAATTAGGAAATTCAAATCGGATAGAAACCCT TCTCTTTCCTCTTTCTAG
Protein sequence (LotjaGi5g1v0249800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMPATLLLLLLLSVPLLSSASSAAAPSAYEALAGFNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNS TITGRISDNRLTDLRGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCDLIRIRKFKSDRNP SLSSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SUPERFAMILY | 5 | 146 | 142 | 1.23E-43 | ||
| PANTHER | 5 | 148 | 144 | 4.0E-61 | – | |
| PANTHER | 5 | 148 | 144 | 4.0E-61 | ||
| Phobius | 6 | 17 | 12 | - | – | |
| Gene3D | 14 | 137 | 124 | 2.0E-34 | ||
| Phobius | 18 | 24 | 7 | - | – | |
| Phobius | 25 | 165 | 141 | - | – | |
| Pfam | 28 | 134 | 107 | 1.2E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0249800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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