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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0252100 |
| Transcript ID | LotjaGi5g1v0252100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT2G47730.1 glutathione S-transferase phi 8; Swiss-Prot: sp|P30109|GSTF1_TOBAC Glutathione S-transferase PARB; TrEMBL-Plants: tr|I3S451|I3S451_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0252100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56049343..56051834) extracted from Lotus japonicus Gifu genome v1.2.
CTAGCAATGAGATGCTCTAAGCATCTACGTAATATGCTTTTGAATTATTTTAAGTTGATGATGTGAACACTTACTTTTAT TTTAAGATGTGAACACTATTTAAATGGGCGATTTTTCTGCCTGGTCAAATGCCTCTCTGTCTTTGGAAAAATCCAGAAAT ATAATTTCCTCTTTATAAGTGCCCTCAGATCCATCCTTCTAACCATTCATTCCTCTTCCATTTTTTTACTCTGCACTGCA CTAAACAATCATGTCAACAATCAAAGTTCATGGAAGCCCCATCTCAAATGCAACCATGCGAGCCCTTGTTGCCCTGTATG AGAAACAGCTTGAATTTGAGTTTGTTCCCACTGACATGCGCAACGGTGAACACAAAAAGGAACCCTTCCTTTCGCTCAAT GTAAGCAACCATCAATTCATCACCAAATAAATCATTTTTTCTTCAATCCACCTTCAACTAATTAATTTCCAATTTTATCT TCCCCTGCAGCCTTTTGGTCAAGTTCCAGCGCTTGAAGATGGAGATTTGAAGCTCTTCGGTAAGATTTGCATATATATAT ATATATATATCATGCCAAACTTTTACAGACACATTCATACAAAGTACAAAAAGTTAAGGTACCAAATTAAGACATGATTA ATATAGTATAAGAGTATATCCTATATCCGTCCGTTTGTTACTGGAGACCTGTTAGAAGTCCCACATTGATTAGAGGTAGA GCATAGATAGCCTTTATAAGTGTAGTGCTGACCTTTATAGATGTCTAAGTCGATAGTCATTTATAAGATCTAACTCTAAG TATGTATGGTTAAGTCTTAACTAAGTCTGGTTAATAACCCTATAACACTAATTCTGCATCTTATATCATCATATCTCATT CCGTTCTGCAATAATATTTGAGAATCACCATCAATATGGGTCGGAGATACTCATTTTTCTCGAGAGAGAAGGTGGCTGCT ATTGAAACAAATAAATTCATTATTGTCACATGTATTGGTACTAACAATAACATGTGCATCTTTCATCAATTCTCCCCAAA GGCCACAATTATTGCTAGAAAATAAACATGTTTATGACAAGAACACATCTTAGCTATAACCTAATTTCTGAGTAGAGTTA AAGGCCTCTCTTGCAATGTTTATTTGAGTTTATCTTATAGCACAAACGCTTATGTACGTGTTTGGAAAATTTATGTAAGT AGCGTATCATCTAGATATAAGTTGTTTTTAGTTTATTTCCATACCATGTTGAAATTCACTTATGAGTGAGAGCTTAAACA TTTTTATAAATCGTCTTATGTGATTAGCTCTTATTGCCATAACTACTTAATTAAAGCTTATCTTTGATCTACTTGCTGGA CCACATGTAAATATTTGGCCAACTTCACTGCCTAGTAATGTGTGTTAAGATTCTCATTAACTAGATATATGATCCAAATA GTCCAGTAGAACAGTTCTCTCCTGTAAATTGAAATAAGAGATGCTGAATGGAACACTGAGCTAACAATTTGTTCTGCAGA ATCAAGGGCCATAACAAAATACATAGCTTACGAGTATGCTGATAAGGGAACAGAGCTGCTAAGCAAAGACTCCAAGAAGA TGGCGGTAACCACGGTGTGGCTAGAAGTCGAGGCCCATCATTTCGATCAACCATCTTCAAAACTGGCGTTTGAGTTGGCG TTCAAGCCTATGTTTGGGATGACTACGGATCCTGCAGTTGTGGAAGAGAATGAAGCCAAGCTGGCTGGTGTTCTTGATGT CTATGAGAAAAGATTGTCTGGGTCCAAATACTTAGCAGCTGAATGCTTCACCTTGGCAGATCTGCATCACATTCCTAACA TTTTCTACTTGATGAACACACAGAGCAAGAAGCTGTTTGAATCAAGGCCTCATGTGAATGCTTGGGTGGCTGATATCACA GCAAGACCAGCTTGGTCTAAGGTCGTTGCCATGTTACCTCCTAAGCCATGAATAGTGAGGAAGAAGGCCTTTCAGGATTG ATGGTGTTGTTGGATGTTCTCTGAGACCTCAAAGATGGCCATTTAAGTTCAAGAAGTACTTTTGCTTTTGTGGGTTGTAC CATGAATTGACTTGTTTTTGTTAAGTCTTAATAATGTATTGTGTGTTAAGGGGACAGAATTCTCTGTCCCATTTGGTGTT TTTCCTCTCCTATGAATAAAAATGCGTGATGTTATTTTAAAACCACTAATATAAGATTAATTGTCATATCGTTTACATGT AGAATAAACATAAAAGATTAATCTGATGACTTTTATGAGGTCTTCTTTGAGTTCTTTAAGCTCAACGACACAAGCAATAT GGTTTTGTGTTTTTAAAGCTTGAAAAACACCTTCTTTTTATCTTCTAGCGTTCACCTAGATTAAAATGATTTAGAAGGTG TTTGTATTGTGTAGAGTTCAAATTAAAAAACAACTCAAACTATCTAGTGATAACTTGAAGAAACAATCCTTCTTTAGTGA CCATGTTTAAAG
CDS sequence (LotjaGi5g1v0252100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAACAATCAAAGTTCATGGAAGCCCCATCTCAAATGCAACCATGCGAGCCCTTGTTGCCCTGTATGAGAAACAGCT TGAATTTGAGTTTGTTCCCACTGACATGCGCAACGGTGAACACAAAAAGGAACCCTTCCTTTCGCTCAATCCTTTTGGTC AAGTTCCAGCGCTTGAAGATGGAGATTTGAAGCTCTTCGAATCAAGGGCCATAACAAAATACATAGCTTACGAGTATGCT GATAAGGGAACAGAGCTGCTAAGCAAAGACTCCAAGAAGATGGCGGTAACCACGGTGTGGCTAGAAGTCGAGGCCCATCA TTTCGATCAACCATCTTCAAAACTGGCGTTTGAGTTGGCGTTCAAGCCTATGTTTGGGATGACTACGGATCCTGCAGTTG TGGAAGAGAATGAAGCCAAGCTGGCTGGTGTTCTTGATGTCTATGAGAAAAGATTGTCTGGGTCCAAATACTTAGCAGCT GAATGCTTCACCTTGGCAGATCTGCATCACATTCCTAACATTTTCTACTTGATGAACACACAGAGCAAGAAGCTGTTTGA ATCAAGGCCTCATGTGAATGCTTGGGTGGCTGATATCACAGCAAGACCAGCTTGGTCTAAGGTCGTTGCCATGTTACCTC CTAAGCCATGA
Protein sequence (LotjaGi5g1v0252100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTIKVHGSPISNATMRALVALYEKQLEFEFVPTDMRNGEHKKEPFLSLNPFGQVPALEDGDLKLFESRAITKYIAYEYA DKGTELLSKDSKKMAVTTVWLEVEAHHFDQPSSKLAFELAFKPMFGMTTDPAVVEENEAKLAGVLDVYEKRLSGSKYLAA ECFTLADLHHIPNIFYLMNTQSKKLFESRPHVNAWVADITARPAWSKVVAMLPPKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 1 | 211 | 211 | 0.0 | ||
| SUPERFAMILY | 1 | 83 | 83 | 1.26E-22 | ||
| Gene3D | 1 | 87 | 87 | 2.2E-34 | ||
| SFLD | 1 | 211 | 211 | 0.0 | – | |
| ProSiteProfiles | 2 | 83 | 82 | 24.009 | ||
| PANTHER | 3 | 212 | 210 | 1.3E-128 | – | |
| PANTHER | 3 | 212 | 210 | 1.3E-128 | – | |
| CDD | 3 | 76 | 74 | 4.67245E-35 | – | |
| Pfam | 5 | 76 | 72 | 1.2E-20 | ||
| SUPERFAMILY | 85 | 208 | 124 | 2.78E-31 | ||
| ProSiteProfiles | 90 | 216 | 127 | 22.612 | ||
| Gene3D | 90 | 214 | 125 | 4.1E-53 | – | |
| CDD | 92 | 209 | 118 | 7.77356E-74 | ||
| Pfam | 117 | 203 | 87 | 9.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0252100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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