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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0258100 |
| Transcript ID | LotjaGi5g1v0258100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 60 kDa chaperonin; TAIR: AT3G23990.1 heat shock protein 60; Swiss-Prot: sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial; TrEMBL-Plants: tr|Q1RSH3|Q1RSH3_MEDTR GroEL-like chaperone, ATPase; Found in the gene: LotjaGi5g1v0258100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56659298..56663201) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTCTAACTGTAGATCATTGATCTTTTGGTTGCAGGATTGCTAGGAACACCAGTCAACAGGTGAAACACCATTGGTT GAATATCATTTGATTTTTTGTTGAAAATGTTTTGAGATTGGTTCTAATTTGATCTATTTATTGAATTGCATAGATTGGAA GCAGGGCGGCGTGGAGCAGGAATTATGCGGCCAAAGACATTAAATTTGGTGTGGCGGCTCGGGCTCTGATGCTTAAGGGT GTTGAAGAGCTTGCTGATGCAGTCCAAGTAACCATGGGCCCTAAGGTAACCAAGCAAATATTTTATATTGTATTTGCTGG TGAAAGTTATTTTTGGTGATGAAATTTTATACGTAAGAATGCTGATCTAAGATCACTATTGAATCACACACACATATATG AGGGAAGAGCAACGTTTTTGGATGTAGGAATGAGAGATATCAATTATAGTCTTATCATTTAATTCTTTATGATTTTAGGG CCGCAATGTGGTGATTGAGCAAAGTTTTGGTGCCCCTAAAGTGACAAAAGATGGAGTAACTGTTGCCAAGAGCATTGAAT TCAAGGATAAAGTCAAGAATGTAGGTGCCAGTCTTGTAAAGCAGGTTGCAAATGCCACCAATGATGTGGCTGGTGATGGT GAGCTGTTTAATCCGTGGAAGATTGTACTACCATTGGTTGTGCCATTATTTTGGTGTTTTTTGTGTGACTTGTGACTGAG TAATGACGGGGCTCTCTAAATTTTGGCAGGAACCACATGTGCTACAGTTCTTACTCGAGCAATATTTGCGGAAGGGTGCA AATCAGTTGCAGCTGGTATGAATGCAATGGACCTGAGGCGAGGTATAAATATGGCGGTTGATTCGGTGGTGACAAACCTG AAGAGCAGAGCACGAATGATTAGTACTTCTGAAGAAATAGCTCAGGTTGGTGTCTCTAATTTTTCGAGGTGTCTTTTTTT AGGAGACTGGAGATAGCAACAAGGAATGAGAGACATGAGTTTAAACTGAACCTTATATTTCAAATTTGTGATGATAGGTT GGGACAATATCTGCTAATGGGGAGAGAGAGATTGGTGAATTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAAGGTGT AATCACAATAGCAGTAAGTTCCTGTACTTTTATCCTGTAAACATTTTCTCTTATGTGGGTTTTATGTTTAATATGGATCT GGGTATAGGGCGATTTCATGTGATGCTTTTTTTTTATTAATATGATATACAGTAGATGGTACATTTTTCTTGATTTTTCC CTCATGATTATGAATCCCATATCAATCACTTATTTCTGAGCCTTTCCTTTCCTCCCCGTTATCCTTACTTCCTGAGGGTT TCATGCCCTACACTTTATGATATGCTGGGACCTAACCTAACATTTGAACTGTTTCAGGATGGCAAGACATTGGAAAATGA GTTGGAAGTTGTTGAAGGCATGAAGCTTGACAGGGGCTACATTTCTCCATATTTCATAACTAACCAGAAGAACCAGAAAT GTGTATGTTTTTTCTCTCTGTTTCTACTTCACGAGTTCACGGCATTTGAAAGGTTTTTGAATCGCGTACCCCTCTATTTT CTTGATATCATGTTGATTGTGTCATTTTTCCAACAGGAACTTGAAGATCCTCTCATTATAATCCATGAGAAGAAAATCTC GAGTATAAATGCCATAGTTAAAGTACTAGAGTTAGCGTTGAAGGTGAGTGATGTTATTTGACTCATTTTGAATTGACTTT CTTTAGATATTGATATTGACTGCCACTTACTCTGTTACTCATCTCCAGAAACAAAGACCTCTATTGATTGTGGCAGAGGA TGTGGAAAGTGAAGCCCTGGCAACTCTTATTCTAAATAAGCTTCGTGCTGGAATCAAGGTTTGTTTTGCCAGTCTGTGGC TTTACATTTTGGTTCTTTGGTACCTCAAATATTGGGTTCCTAGTTTTGCTTGTTTGATGTGGAATTTGTTGCATTGCGTT AGGTATGTGCCATCAAAGCCCCTGGTTTTGGTGAAAATCGAAAATCTGGTCTCCAGGATCTTGCTGTTCTTACAGGAGGT CAAGTAAGTTTTCTATTTGCAATGGGGTACTACTAGTATCATATTCTATAATATCTTACAAACCTTCGAATCACACTTTT TCTCAATCCATTTAGCTTATCACTGGAGAGCTTGGCATGAATCTTGAAAAAGTGGATCTAGAGATGCTTGGCTCTTGCAA AAAGGTAACCTTTTATTCTAAGTTTCTAACTACTATATCTTTTCATGCATGATCGTGCTTTGGTACTCTCTCTTGGTTAA TTTCCGTGATGGCTCAGTTTTGTTTGAGGATTCAGACTCAGAGCTTGTTTTTTGTTTACGCTTGAATTAAATTTTGAATG AACTTACAAGTTTTAGCCTGATAATGTGTAAGATTAAATGACTTAGACTCTAATCGAGTTTCCTAATGTTTTAGATTACT ATTTCCAAAGATGACACTGTCATTCTTGATGGAGCTGGTGATAAGAAAGCACTTGAGGAAAGATGTGAGCAGGTTTGTTT GAGTCTCCTATTAGATTTGGTTCCGCCATTGTTTGTATATTCTGCTTTTACCTAGTAATGGGTCTGATGGTTTCCTGATG TTTCTGGCTTGTTTCTTGTGATGAATTTTGATAAACAGATTAGGTCTGCAATTGAAAATAGCACTTCAGATTATGACAAG GAAAAATTACAAGAAAGATTAGCCAAACTTTCTGGGGGTGTTGCAGTGCTTAAGGTATGCATATTTAAGTTGCCCTTCTT GCTTTTGGGTTTTAGCTTGATGAATATCCTGAGTTTCTGTCATGATAAATTAACATCTGAAACTTGACCTTTGTAGATTG GAGGAGCTAGTGAGGCTGAAGTTAGTGAGAAGAAGGATAGAGTGACAGATGCCTTAAATGCAACTAAGGCAGCTGTAGAG GAGGGCATATTACCTGGTAAATTATTAGCCCTAGCTGTGTTGTTTGTATGCCTAGTTCTACATCCTCCACTTCCTTTCAC ATCTGATATATATTTTGCACTGCTCAGGTGGTGGTGTTGCTCTTCTGTATGCATCTAATGAGTTGAGTAAGCTTCAAACT GCCAACTTTGATCAAAAGATAGGTGTCCAGATTATCCAAAATGCTTTGAAGGTTAGACTTTTCTGTGCTTTTGCTTATGT TTAGATCATCCTTAGCATTTTTTGTTGGCAGGGCTCCACTCAACATGTTTTTCTTTCTTCTTCCTTTCTGATTGCTTTAA GGCCTCCTCTTCATGCAATATTTTCAGCTGGAGATTTGTCTTTAAGATATAGTATGGTTTACCTATAATTTCAGTTTCTT GCTCTCTTTTACTAACTGTTGTAACAAACGATGCAGACACCTGTGCACACAATTGCAGCAAATGCTGGAGTTGAGGGCGC TGTTGTTGTCGGTAAATTATTGGAACAAAATAATCCTGATCTTGGGTATGATGCAGCCAAAGGTCAGTGTTCTTATTTTT CCCTTTCCCTGGGCTCATTTACCTTTGCCAAAAGATAAGATTCTTACATCATTACTGATTACGGTTTCATCTTTTTTCCC ACTTTGTAATTAGGTGAATATGTTGATATGGTTAAATCTGGAATAATTGATCCATTGAAGGTGATTAGAACCGCACTGGT TGACGCAGCCAGGTAGGATGTTAAGAACTTTGTGGTGGATATATGTCTTTGGTTTTTTTTTACGTAGCTTAACTAATCAA AATTTTCCTGCAGTGTGTCTTCTTTGATGACAACAACTGAAGCAATTGTGACTGAATTTCCAAAAGAAGATAAAGATGTT CCTGCTATGGGTGGTGGCATGGGTGGCATGGGTGGAATGGATTATTAGAGGCTATTTCCCCTAG
CDS sequence (LotjaGi5g1v0258100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAAGGGTGTTGAAGAGCTTGCTGATGCAGTCCAAGTAACCATGGGCCCTAAGGGCCGCAATGTGGTGATTGAGCA AAGTTTTGGTGCCCCTAAAGTGACAAAAGATGGAGTAACTGTTGCCAAGAGCATTGAATTCAAGGATAAAGTCAAGAATG TAGGTGCCAGTCTTGTAAAGCAGGTTGCAAATGCCACCAATGATGTGGCTGGTGATGGAACCACATGTGCTACAGTTCTT ACTCGAGCAATATTTGCGGAAGGGTGCAAATCAGTTGCAGCTGGTATGAATGCAATGGACCTGAGGCGAGGTATAAATAT GGCGGTTGATTCGGTGGTGACAAACCTGAAGAGCAGAGCACGAATGATTAGTACTTCTGAAGAAATAGCTCAGGTTGGGA CAATATCTGCTAATGGGGAGAGAGAGATTGGTGAATTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAAGGTGTAATC ACAATAGCAGATGGCAAGACATTGGAAAATGAGTTGGAAGTTGTTGAAGGCATGAAGCTTGACAGGGGCTACATTTCTCC ATATTTCATAACTAACCAGAAGAACCAGAAATGTGAACTTGAAGATCCTCTCATTATAATCCATGAGAAGAAAATCTCGA GTATAAATGCCATAGTTAAAGTACTAGAGTTAGCGTTGAAGAAACAAAGACCTCTATTGATTGTGGCAGAGGATGTGGAA AGTGAAGCCCTGGCAACTCTTATTCTAAATAAGCTTCGTGCTGGAATCAAGGTATGTGCCATCAAAGCCCCTGGTTTTGG TGAAAATCGAAAATCTGGTCTCCAGGATCTTGCTGTTCTTACAGGAGGTCAACTTATCACTGGAGAGCTTGGCATGAATC TTGAAAAAGTGGATCTAGAGATGCTTGGCTCTTGCAAAAAGATTACTATTTCCAAAGATGACACTGTCATTCTTGATGGA GCTGGTGATAAGAAAGCACTTGAGGAAAGATGTGAGCAGATTAGGTCTGCAATTGAAAATAGCACTTCAGATTATGACAA GGAAAAATTACAAGAAAGATTAGCCAAACTTTCTGGGGGTGTTGCAGTGCTTAAGATTGGAGGAGCTAGTGAGGCTGAAG TTAGTGAGAAGAAGGATAGAGTGACAGATGCCTTAAATGCAACTAAGGCAGCTGTAGAGGAGGGCATATTACCTGGTGGT GGTGTTGCTCTTCTGTATGCATCTAATGAGTTGAGTAAGCTTCAAACTGCCAACTTTGATCAAAAGATAGGTGTCCAGAT TATCCAAAATGCTTTGAAGACACCTGTGCACACAATTGCAGCAAATGCTGGAGTTGAGGGCGCTGTTGTTGTCGGTAAAT TATTGGAACAAAATAATCCTGATCTTGGGTATGATGCAGCCAAAGGTGAATATGTTGATATGGTTAAATCTGGAATAATT GATCCATTGAAGGTGATTAGAACCGCACTGGTTGACGCAGCCAGTGTGTCTTCTTTGATGACAACAACTGAAGCAATTGT GACTGAATTTCCAAAAGAAGATAAAGATGTTCCTGCTATGGGTGGTGGCATGGGTGGCATGGGTGGAATGGATTATTAG
Protein sequence (LotjaGi5g1v0258100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKGVEELADAVQVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATVL TRAIFAEGCKSVAAGMNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVI TIADGKTLENELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLIIIHEKKISSINAIVKVLELALKKQRPLLIVAEDVE SEALATLILNKLRAGIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITGELGMNLEKVDLEMLGSCKKITISKDDTVILDG AGDKKALEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVSEKKDRVTDALNATKAAVEEGILPGG GVALLYASNELSKLQTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQNNPDLGYDAAKGEYVDMVKSGII DPLKVIRTALVDAASVSSLMTTTEAIVTEFPKEDKDVPAMGGGMGGMGGMDY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 527 | 527 | 0.0 | – | |
| PANTHER | 1 | 527 | 527 | 0.0 | – | |
| Gene3D | 1 | 507 | 507 | 6.9E-231 | ||
| CDD | 1 | 509 | 509 | 0.0 | ||
| Hamap | 1 | 530 | 530 | 36.409 | ||
| TIGRFAM | 1 | 513 | 513 | 6.9E-225 | ||
| SUPERFAMILY | 2 | 507 | 506 | 1.07E-70 | ||
| Pfam | 8 | 508 | 501 | 3.4E-85 | ||
| PRINTS | 12 | 38 | 27 | 6.2E-71 | ||
| PRINTS | 68 | 95 | 28 | 6.2E-71 | ||
| Gene3D | 122 | 395 | 274 | 6.9E-231 | ||
| SUPERFAMILY | 123 | 190 | 68 | 2.98E-23 | ||
| SUPERFAMILY | 169 | 361 | 193 | 3.35E-80 | ||
| Gene3D | 177 | 358 | 182 | 6.9E-231 | ||
| PRINTS | 253 | 276 | 24 | 6.2E-71 | ||
| Coils | 324 | 344 | 21 | - | – | |
| PRINTS | 335 | 360 | 26 | 6.2E-71 | ||
| PRINTS | 383 | 404 | 22 | 6.2E-71 | ||
| ProSitePatterns | 390 | 401 | 12 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of LotjaGi5g1v0258100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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