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LotjaGi5g1v0260300.2

Overview

Field Value
Gene ID LotjaGi5g1v0260300
Transcript ID LotjaGi5g1v0260300.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G35960.1 Protein kinase family protein; Swiss-Prot: sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK2; TrEMBL-Plants: tr|V7BFG8|V7BFG8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0260300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:56873716..56877589) extracted from Lotus japonicus Gifu genome v1.2.

TTTGATGTCTGCACCTCTGTTTTCTCCATTGTCTCATTGCTCTGTTTTCCTCTGTTTCTCTGTTTCTTATTCCAATTGAA AAACAATATCAGGGGCTTGTTCTTTGTCTCAGTGGCATTCGCCAACCAAACTTGTCTTTCACTCTTCCTATTTAGTTCAA TTTAATCATTCACACCATCTTTCTAAGTTTCTTTTCTGAGTTTTCAGCGCTTCTATGCAGATTGCACAGCACCCTTCCTG TTTCTGATACGTAATTTGGTGTCCTCTGTTTTGGGGTCTCTTCACAATATGGTTTTTCTCTCTTGCTTTGGCTTCTCCCT CAGGCTTCTTTGATTCTTGCAATTCAGGAAGCTTTTCTTTCTTGTTTTGGATATCTCCTTCAACTGAATAATTTTACAAC CACTTTCCTATATTTTTCATCTCCATTTCAATTTTCTGTTTGATGGATTGCTCTTAATTTATTATCTTGTTATACCAGAG AAAAATCCATTCAATCTTCCTTAAGTTATGTGTAATTTATCCTTCATCATAAAAAATCTCATTTTCTTGATGAGATTGTG ATATATTTTCTTGTACTACTAGTAGAGGGTTTGTGCCTTTGTGAGTCTTTGAAAATGAAGGATAAAGTGGATTCCCCTGT TACAGTGCTTGAGGATTATTTCAGGAGTTCAGATTCAGAATCAAGTTCTTCTAAAGAGGTTACAGCAGATTCTGAGTCTA GAGACATTTCAAAACCTTGTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGGACCAAACCAAAAAATCAAATGGCCACA TTGCATCCTCTCAATCTCTCCAGAAAAATGAGCAGGAGCATGAGGGAAACCATGCTCCCAAGTTGTTTCATTGATGCAAC TTTATCCCCTTGCAGATCACCTTGGAAGATCTTCACTCATCATGATTTACAGGTTGCCACCAATTACTTTAGCCAAGGTA TGCAAACATGCTTAAGAATTAGATTTGCCATCTCATTAAGGAAGATCAAGTGCATGTTTGGAAAGCATAATCAAATCTGT AAAATCAATTATACTTTGTTAAAATAAATTATAACTAGTTGAAATGATGTTTGAGTGTACCACCAAAAATTAATTTCATG AGTCAAGAATTCAATCCACTTGACACAACAAATAGTTGTTTCTGCGTATAATCAATTGTGAGATTTTATAATTGAATTCT GTAACAGGAAAACCACAATTTTAATAAAAGTATCCAAATATAAATCACATCTTTTTAACTCATACCTACATAATTTTAGT AGAATCAATTATATCCAGAATCGATTCGGCTTACGTTGATCCAAACACACACTAAATCCATACACACACACACATACTAA GTAATCACCTAAGTGTGTTTGGAAATTCTTCTAGAATTGATTCTAAATCCATAATCACTGATGGGGAGAAACATATGTGA GTAACAGCTTCTTCTGGGTGTCATAATTGATTTTGAGAAAACAGATTGATCAACGTACTATGCGTAGCATGTTTTGATTT TTTTTTCTTACTACATTGGTTGGTGCAGAGAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGTGTTTGCC AAATCATCAGCTAGTTGCAATCAAAAGGCTAACAAGAGGAACAACTGATGAAATCATAGGTGATTTCTTATCTGAACTTG GTGTGATGGCACATGTAAACCATCCAAATACTGCTAAGCTTGTTGGCTATGGTGTTGATGGAGGAATGCATATAGTTCTT GAATTGTCTGAGAAAGGAAGCCTAGCTTCAGTGCTTTATGGTAGTAGCTAATAATAGCTTAAACAATTTTTCCCATTTTG CCTATTATTTAGCCAATTTTTACTGTTTTTAATCAAGTATTCATTTCTTTATTTCAGGTTCTAATGAGAAACTACCATGG TGTATTAGGCACAATATTGCATTAGGAACAGCTAGGGGTCTATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCA TAGAGATATAAAAGCTGCAAACATATTGCTCACAGAAGACTATGAGCCTCAGGTATGTATGCTTTGGATTCTCTTTTGTA AGTTTGATTCTGTACAAAATAATTGATCACCACAAATTCCTTGTGTAAAATGCATATTTTGTAATTTACCACAAGTTCAA ACAAATTTTGGAAGATTCTTCATTAAATGTGATGGACCAAATGAAACCTGTCTTTTTCTACATTATTAGCTTCTCTAATC CACCTCAATTTAAACAGCACTAGTGTTTCTAAGTTTCATACATGAGTGGACTTTATAATTCTATATTTAATATTGTAGGA ATAAACTAAAATGTTGTGAACTTATGGTGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCAC CATACCGTTGCAAAATTTGAAGGAACTTTTGGGTTAGTGACCTTCAGAATCACTAACATAGCATGTTTTAATCAACTTGT TTTTTCTCAGAATCATTTCTGACACTTAAAAGTTACAAAAGCTTCTCCCTAAAATCAATTTTAGTTTTACAATCAATCAT AGAATGATTTCTAAACATGCACTTATTGTTATAAAAAATTGTGGCTGCAAAATTAACTCGGGTTTCATTTGGGGTTGACA CAGATACCTTGCTCCTGAATACTTACTTCATGGCATAGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTACTGCTAT TGGAATTAGTCAGTGGGCGAAGAGCACTTGATTTTTCACAGCAAAGCCTTGTTTTGTGGGTATAGTACCTTATCAACAGT GTTTAAGATAGCATCCACTTTTTTTACTTGTGTTTTTATAAGTAACACCATTAGTCCATCTAGGAGAAGGTGATTTACAC TTAAATGTCATGCTAGCTTGACTTATAGTCTTTTTTTACCTTGAAAGATTGTCAGTCTAGGAATTGAAACTTTCCTTCTA ATAATAAAAAATTTCAGGCAAAACCATTACTGAAAAAGAATGAAATTATGGAGCTGATTGATCCTTCACTGGCAGACGGC TTTGACTCTAGGCAGATGAATCTCATGCTCTTGGCAGCTTCTTTATGCATACAACAGTCCTCGATTCGTCGTCCCTCTAT TCGACAGGAACGCGATACATTTCTTTTGAAATTTCAACATTATTTGACTTCAACTAGCAATTTAGATTACAAAATTTCTG AAATTTTTTTGGTGGTGCAGGTTTTACAGATTCTGAATGGCAATCTTAGCTGCTTTAAGGGGATGAAGAAAACTCGAATG CCATTCTTCAGAAAAGTCTTCCGGGAAGAACTCCTTGACTCTGATTAGTTGAATGAGGAGGTTTTGATCGCTCAATGGTG ATTGTGATCTTTCTGGCTCCAACTTTCTACTGGAGTTTCTGCAGAATAGGAATTGTCTCATCAAACCGACATTTTTGCAG TTTGTGATTGTGATGTCCGTAAGAAATTAACGGTCGCTACTGGAGTTCGTCCTACCAGAATGTGGAAGTTCCTGATTCAA ATGAGATTCTCTGAAAAAGCCTGCAACATTGTAAATAGTAGGTCTTTTTAGTTAGTTATTTGGAAGAAAGAAGGGTTAAA GGTCATATTAGTCCCTGTATTTGTAAAAGTGTTTGGTTTTGGTCCCTTAGCCAAAAAATGACGATTAGTGGCGGTTTTGT TTACAGTTACTGACGGTTTATAATACAGTTATTGGCGGTTTTTTTGCTGAGGGACCAAAATCAAACGTTTTTACAAACAC ATGGACTAATATGACCCTTAACCCAAGAAAGAAATACTGTATTACTGGTGAGACTTAATCGCATGTACCTCTCATGCAGT TGTTGCAGTGCCAAACGTTCAATCCTCTCCTGCA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0260300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGGATAAAGTGGATTCCCCTGTTACAGTGCTTGAGGATTATTTCAGGAGTTCAGATTCAGAATCAAGTTCTTCTAA AGAGGTTACAGCAGATTCTGAGTCTAGAGACATTTCAAAACCTTGTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGGA CCAAACCAAAAAATCAAATGGCCACATTGCATCCTCTCAATCTCTCCAGAAAAATGAGCAGGAGCATGAGGGAAACCATG CTCCCAAGTTGTTTCATTGATGCAACTTTATCCCCTTGCAGATCACCTTGGAAGATCTTCACTCATCATGATTTACAGGT TGCCACCAATTACTTTAGCCAAGAGAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATC ATCAGCTAGTTGCAATCAAAAGGCTAACAAGAGGAACAACTGATGAAATCATAGGTGATTTCTTATCTGAACTTGGTGTG ATGGCACATGTAAACCATCCAAATACTGCTAAGCTTGTTGGCTATGGTGTTGATGGAGGAATGCATATAGTTCTTGAATT GTCTGAGAAAGGAAGCCTAGCTTCAGTGCTTTATGGTTCTAATGAGAAACTACCATGGTGTATTAGGCACAATATTGCAT TAGGAACAGCTAGGGGTCTATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCATAGAGATATAAAAGCTGCAAAC ATATTGCTCACAGAAGACTATGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCACCA TACCGTTGCAAAATTTGAAGGAACTTTTGGATACCTTGCTCCTGAATACTTACTTCATGGCATAGTGGATGAGAAAACAG ATGTATTTGCCTTTGGTGTACTGCTATTGGAATTAGTCAGTGGGCGAAGAGCACTTGATTTTTCACAGCAAAGCCTTGTT TTGTGGGCAAAACCATTACTGAAAAAGAATGAAATTATGGAGCTGATTGATCCTTCACTGGCAGACGGCTTTGACTCTAG GCAGATGAATCTCATGCTCTTGGCAGCTTCTTTATGCATACAACAGTCCTCGATTCGTCGTCCCTCTATTCGACAGGAAC GCGATACATTTCTTTTGAAATTTCAACATTATTTGACTTCAACTAGCAATTTAGATTACAAAATTTCTGAAATTTTTTTG GTGGTGCAGGTTTTACAGATTCTGAATGGCAATCTTAGCTGCTTTAAGGGGATGAAGAAAACTCGAATGCCATTCTTCAG AAAAGTCTTCCGGGAAGAACTCCTTGACTCTGATTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0260300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKDKVDSPVTVLEDYFRSSDSESSSSKEVTADSESRDISKPCSRWHSFLQLLRTKPKNQMATLHPLNLSRKMSRSMRETM LPSCFIDATLSPCRSPWKIFTHHDLQVATNYFSQENLIGKGGYAEVYKGCLPNHQLVAIKRLTRGTTDEIIGDFLSELGV MAHVNHPNTAKLVGYGVDGGMHIVLELSEKGSLASVLYGSNEKLPWCIRHNIALGTARGLLYLHEGCQRRIIHRDIKAAN ILLTEDYEPQICDFGLAKWLPENWTHHTVAKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDFSQQSLV LWAKPLLKKNEIMELIDPSLADGFDSRQMNLMLLAASLCIQQSSIRRPSIRQERDTFLLKFQHYLTSTSNLDYKISEIFL VVQVLQILNGNLSCFKGMKKTRMPFFRKVFREELLDSD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
16 39 24 - –
PANTHER
PTHR27001
48 376 329 6.3E-151 –
PANTHER
PTHR27001:SF54
48 376 329 6.3E-151 –
Gene3D
G3DSA:3.30.200.20
89 186 98 1.6E-21 –
SUPERFAMILY
SSF56112
97 389 293 2.56E-71
IPR011009
ProSiteProfiles
PS50011
112 378 267 33.347
IPR000719
SMART
SM00220
112 379 268 1.1E-28
IPR000719
Pfam
PF00069
113 318 206 3.4E-40
IPR000719
ProSitePatterns
PS00107
118 140 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
189 386 198 2.9E-55 –
ProSitePatterns
PS00108
231 243 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0260300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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