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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260300 |
| Transcript ID | LotjaGi5g1v0260300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G35960.1 Protein kinase family protein; Swiss-Prot: sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK2; TrEMBL-Plants: tr|V7BFG8|V7BFG8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0260300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56874330..56877043) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGATAAAGTGGATTCCCCTGTTACAGTGCTTGAGGATTATTTCAGGAGTTCAGATTCAGAATCAAGTTCTTCTAA AGAGGTTACAGCAGATTCTGAGTCTAGAGACATTTCAAAACCTTGTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGGA CCAAACCAAAAAATCAAATGGCCACATTGCATCCTCTCAATCTCTCCAGAAAAATGAGCAGGAGCATGAGGGAAACCATG CTCCCAAGTTGTTTCATTGATGCAACTTTATCCCCTTGCAGATCACCTTGGAAGATCTTCACTCATCATGATTTACAGGT TGCCACCAATTACTTTAGCCAAGGTATGCAAACATGCTTAAGAATTAGATTTGCCATCTCATTAAGGAAGATCAAGTGCA TGTTTGGAAAGCATAATCAAATCTGTAAAATCAATTATACTTTGTTAAAATAAATTATAACTAGTTGAAATGATGTTTGA GTGTACCACCAAAAATTAATTTCATGAGTCAAGAATTCAATCCACTTGACACAACAAATAGTTGTTTCTGCGTATAATCA ATTGTGAGATTTTATAATTGAATTCTGTAACAGGAAAACCACAATTTTAATAAAAGTATCCAAATATAAATCACATCTTT TTAACTCATACCTACATAATTTTAGTAGAATCAATTATATCCAGAATCGATTCGGCTTACGTTGATCCAAACACACACTA AATCCATACACACACACACATACTAAGTAATCACCTAAGTGTGTTTGGAAATTCTTCTAGAATTGATTCTAAATCCATAA TCACTGATGGGGAGAAACATATGTGAGTAACAGCTTCTTCTGGGTGTCATAATTGATTTTGAGAAAACAGATTGATCAAC GTACTATGCGTAGCATGTTTTGATTTTTTTTTCTTACTACATTGGTTGGTGCAGAGAATTTGATTGGAAAGGGAGGTTAT GCTGAAGTTTACAAAGGGTGTTTGCCAAATCATCAGCTAGTTGCAATCAAAAGGCTAACAAGAGGAACAACTGATGAAAT CATAGGTGATTTCTTATCTGAACTTGGTGTGATGGCACATGTAAACCATCCAAATACTGCTAAGCTTGTTGGCTATGGTG TTGATGGAGGAATGCATATAGTTCTTGAATTGTCTGAGAAAGGAAGCCTAGCTTCAGTGCTTTATGGTAGTAGCTAATAA TAGCTTAAACAATTTTTCCCATTTTGCCTATTATTTAGCCAATTTTTACTGTTTTTAATCAAGTATTCATTTCTTTATTT CAGGTTCTAATGAGAAACTACCATGGTGTATTAGGCACAATATTGCATTAGGAACAGCTAGGGGTCTATTATATCTTCAT GAGGGTTGTCAAAGAAGAATAATCCATAGAGATATAAAAGCTGCAAACATATTGCTCACAGAAGACTATGAGCCTCAGGT ATGTATGCTTTGGATTCTCTTTTGTAAGTTTGATTCTGTACAAAATAATTGATCACCACAAATTCCTTGTGTAAAATGCA TATTTTGTAATTTACCACAAGTTCAAACAAATTTTGGAAGATTCTTCATTAAATGTGATGGACCAAATGAAACCTGTCTT TTTCTACATTATTAGCTTCTCTAATCCACCTCAATTTAAACAGCACTAGTGTTTCTAAGTTTCATACATGAGTGGACTTT ATAATTCTATATTTAATATTGTAGGAATAAACTAAAATGTTGTGAACTTATGGTGCAGATTTGTGATTTCGGGCTAGCAA AATGGCTACCAGAGAATTGGACTCACCATACCGTTGCAAAATTTGAAGGAACTTTTGGGTTAGTGACCTTCAGAATCACT AACATAGCATGTTTTAATCAACTTGTTTTTTCTCAGAATCATTTCTGACACTTAAAAGTTACAAAAGCTTCTCCCTAAAA TCAATTTTAGTTTTACAATCAATCATAGAATGATTTCTAAACATGCACTTATTGTTATAAAAAATTGTGGCTGCAAAATT AACTCGGGTTTCATTTGGGGTTGACACAGATACCTTGCTCCTGAATACTTACTTCATGGCATAGTGGATGAGAAAACAGA TGTATTTGCCTTTGGTGTACTGCTATTGGAATTAGTCAGTGGGCGAAGAGCACTTGATTTTTCACAGCAAAGCCTTGTTT TGTGGGTATAGTACCTTATCAACAGTGTTTAAGATAGCATCCACTTTTTTTACTTGTGTTTTTATAAGTAACACCATTAG TCCATCTAGGAGAAGGTGATTTACACTTAAATGTCATGCTAGCTTGACTTATAGTCTTTTTTTACCTTGAAAGATTGTCA GTCTAGGAATTGAAACTTTCCTTCTAATAATAAAAAATTTCAGGCAAAACCATTACTGAAAAAGAATGAAATTATGGAGC TGATTGATCCTTCACTGGCAGACGGCTTTGACTCTAGGCAGATGAATCTCATGCTCTTGGCAGCTTCTTTATGCATACAA CAGTCCTCGATTCGTCGTCCCTCTATTCGACAGGAACGCGATACATTTCTTTTGAAATTTCAACATTATTTGACTTCAAC TAGCAATTTAGATTACAAAATTTCTGAAATTTTTTTGGTGGTGCAGGTTTTACAGATTCTGAATGGCAATCTTAGCTGCT TTAAGGGGATGAAGAAAACTCGAATGCCATTCTTCAGAAAAGTCTTCCGGGAAGAACTCCTTGACTCTGATTAG
CDS sequence (LotjaGi5g1v0260300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGATAAAGTGGATTCCCCTGTTACAGTGCTTGAGGATTATTTCAGGAGTTCAGATTCAGAATCAAGTTCTTCTAA AGAGGTTACAGCAGATTCTGAGTCTAGAGACATTTCAAAACCTTGTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGGA CCAAACCAAAAAATCAAATGGCCACATTGCATCCTCTCAATCTCTCCAGAAAAATGAGCAGGAGCATGAGGGAAACCATG CTCCCAAGTTGTTTCATTGATGCAACTTTATCCCCTTGCAGATCACCTTGGAAGATCTTCACTCATCATGATTTACAGGT TGCCACCAATTACTTTAGCCAAGAGAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATC ATCAGCTAGTTGCAATCAAAAGGCTAACAAGAGGAACAACTGATGAAATCATAGGTGATTTCTTATCTGAACTTGGTGTG ATGGCACATGTAAACCATCCAAATACTGCTAAGCTTGTTGGCTATGGTGTTGATGGAGGAATGCATATAGTTCTTGAATT GTCTGAGAAAGGAAGCCTAGCTTCAGTGCTTTATGGTTCTAATGAGAAACTACCATGGTGTATTAGGCACAATATTGCAT TAGGAACAGCTAGGGGTCTATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCATAGAGATATAAAAGCTGCAAAC ATATTGCTCACAGAAGACTATGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCACCA TACCGTTGCAAAATTTGAAGGAACTTTTGGATACCTTGCTCCTGAATACTTACTTCATGGCATAGTGGATGAGAAAACAG ATGTATTTGCCTTTGGTGTACTGCTATTGGAATTAGTCAGTGGGCGAAGAGCACTTGATTTTTCACAGCAAAGCCTTGTT TTGTGGGCAAAACCATTACTGAAAAAGAATGAAATTATGGAGCTGATTGATCCTTCACTGGCAGACGGCTTTGACTCTAG GCAGATGAATCTCATGCTCTTGGCAGCTTCTTTATGCATACAACAGTCCTCGATTCGTCGTCCCTCTATTCGACAGGTTT TACAGATTCTGAATGGCAATCTTAGCTGCTTTAAGGGGATGAAGAAAACTCGAATGCCATTCTTCAGAAAAGTCTTCCGG GAAGAACTCCTTGACTCTGATTAG
Protein sequence (LotjaGi5g1v0260300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKDKVDSPVTVLEDYFRSSDSESSSSKEVTADSESRDISKPCSRWHSFLQLLRTKPKNQMATLHPLNLSRKMSRSMRETM LPSCFIDATLSPCRSPWKIFTHHDLQVATNYFSQENLIGKGGYAEVYKGCLPNHQLVAIKRLTRGTTDEIIGDFLSELGV MAHVNHPNTAKLVGYGVDGGMHIVLELSEKGSLASVLYGSNEKLPWCIRHNIALGTARGLLYLHEGCQRRIIHRDIKAAN ILLTEDYEPQICDFGLAKWLPENWTHHTVAKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDFSQQSLV LWAKPLLKKNEIMELIDPSLADGFDSRQMNLMLLAASLCIQQSSIRRPSIRQVLQILNGNLSCFKGMKKTRMPFFRKVFR EELLDSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 16 | 39 | 24 | - | – | |
| PANTHER | 47 | 394 | 348 | 7.9E-156 | – | |
| PANTHER | 47 | 394 | 348 | 7.9E-156 | – | |
| Gene3D | 89 | 186 | 98 | 1.4E-21 | – | |
| SUPERFAMILY | 92 | 377 | 286 | 4.59E-73 | ||
| SMART | 112 | 384 | 273 | 1.7E-29 | ||
| ProSiteProfiles | 112 | 395 | 284 | 34.11 | ||
| Pfam | 113 | 375 | 263 | 4.1E-41 | ||
| ProSitePatterns | 118 | 140 | 23 | - | ||
| Gene3D | 189 | 391 | 203 | 8.6E-58 | – | |
| ProSitePatterns | 231 | 243 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0260300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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