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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260700 |
| Transcript ID | LotjaGi5g1v0260700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gibberellin receptor GID1A; TAIR: AT3G63010.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B; TrEMBL-Plants: tr|A0A1J7IIT0|A0A1J7IIT0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0260700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56913545..56917793) extracted from Lotus japonicus Gifu genome v1.2.
AAGACAAAAAGAGTGAACGTGTAGACATTTGAGTGAACAAGTCCAAAACGGGGTTATCAATTGCCATCAACAAAGCTTCT TATGTACACAAACCTCTACGTCACAACTCATTTCTCTCCCTCGCTTTCAATACCACCACAACGATACAAACAAAACAACA ACAACAATAATAACTTTCATTATTTTTCTAAACTATCATCCCACAACCGACAGTCATGAAATCACGTAGCCGCTCGCGAC TCAAAGACTACATTCTGTGAACAAACTCTTCTCCATACACACAACCGAGTACTCGAACTCTGAATTAAATGCTTGAGGAG CTCAGTTATCTATCGGCCGAGTTTCCAAGTTTCGTATGATAATAAAATTTAAGAAAAAAGAAAAGGTGGGACCCATATAA ACAGTTTAATTCGGCCGCCAGCTTTGTCGTCTCTCTCGTCTCCGTCCATCTCCGTCGTTCCTACCTCCCTTCCTCTGCCT TTGTCTCTCTCTCTCTCTCTCTTCACTTTCTCTCTCCACCACCACCTCCTTCTTATCATTCCCACACCTCACTCACCCTC TCTTCCTCTCTCCCTCTAATCTTATCTCTGTTTCTCTCTCCTCTGTTTCTCTCTGCTTCTTCTTTCTTCGTTTCACACAC AGAACTGAACTTAACCCGCAAATCAATCGAAAGTGAGAGATACCCACCTCTGTTTTCTCGGTTTTCTCTCCACCCCATCA CTTGTTCTGTCTTTATATCATGAGGCGGCACAAAAAATCTTTGCTTTGTGTTTGTGTGTGAGGGAGGATCACTGTTGACT GTTCCTTTTGCAAGTGTTTTTTTTTTCTTCTCTGGATTTGGTTTTTGAAATCTCTGGTGTGTAGAGCTTGAACAAACATG ACTGGAACAGACATGACTGGTGGTAATGAAGTCAACCTCATTGAATCTAAGGTAACATTTCATAGTTTCTTCAACCTTCC ATCTTGGATGTTTTTTTATTTTTTCATTTTAAATTTTTTGAAGGCGGCACTATGTTTTTACTTCTTCCTTGCTCTGTTTG TCCTTATTGATGTATTATTGATGATGGGTTTTTGGGTTAAGGGGGAAAGTTGTAATCTTTGGCATCCATTGCCAAGGACT GCATAGAGAGAGAAGAGATAAGAAGATATATTTTTGTGTTGTTTTTGTTGTTTTTAGTTTAACTTTTTTTTTACCATCTC TGGGTTTAGTTGATAATGATGGCCCCTATAGATGATGCAGTTTTTGGGGCTTGTTTCATTTTTTGTTGTACTTTCTATTT CTTCCGTGTAGGCCTTGGGTTTCTTGTTCTGGTAAGTTGAAGTTTGATTTGGTGCAAAAGGTTGAAAACCCTCGTCTTTT TCTAAAAGATTTGTATGCTTCATTCACAAGTACACCCTTTTATGATCCCTTTTGCTGCTCCACTTCCTCAACTCTTGGAG GATTTTATAGCTTAGTGCCTGTGTTATCTGATTAGAGCAATTTTTTTGTTACAAGCACTAGCTACAGTGTCAAATGAAAA TGCTTAGTTCATCATGTAGATAAGGTTCTGATGATAACATCTTGTATCTTTGTTTGTAGAATGTTGTGCCACTCAATACA TGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTTTTGAGACGTGCTGATGGAACATTCAATCGAGAGTTGGCAGA GTTCCTTGACCGCAAGGTCCCCTGCAACACCATTCCTGTTGATGGAGTGTTCTCTTTCGACCATGTCGATCGAAACACTG GCCTCTTTAGCAGGGTGTATCAACAAGCTCATGAGAATGTGTCTCGGTGGGGGATTATAGATTTTGAAAAGTCCCTCAGC ACCAAGCGTATTGTCCCGGTCATTATTTTCTTCCATGGTGGAAGCTTCTCACATTCCTCTGCCAACAGTGCTATCTACGA CACTTTCTGCCGCCGCCTAGTGAGCAATTGTGAGGCTGTTGTGGTTTCTGTGAATTACCGGCGATCGCCCGAGCACCGGT ATCCATGTGCGTATGATGACGGCTGGTCTGCGCTTATGTGGGTTAAATCAAGGGCATGGCTTCAGAGTGGAAAGGATTCT AAGGTTTATGTGTACTTGGCAGGGGATAGTTCCGGCGGTAATATTGCTCACCATGTCGCTGTTAGGGCTGCAGAGGAAGA TGTTGAGGTGCTAGGTAATATTCTTCTTCATCCGCTGTTTGGCGGGGAGAAGCGAACGGAATCAGAGAAGAAACTTGATG GGAAGTACTTTGTGAGGTTGCAAGACCGCGACTGGTATTGGCGAGCTTTTCTTCCCGAAGGCGAGGATAGAGACCATCCT GCTTGTAACCCGTTCGGCCCCAGGGGTAGAAGCATTGCAGGACTCAAGTTCCCCAAAAGCCTTGTTTGTGTGGCGGGTTT AGATCTCCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTCAGGCCATGATGTTAACCTTCTTTACCTTA AGGAGGCGACTATCGGATTCTACTTCTTGCCGAACAATGATCATTTCTATTGCCTCATGAAGGAGATGAAGAACTTCGTG AGTTCTAACTGTTAATATACCACCACAACTTAACCATGCCTGCAGGAGGGCCATACATAACTAAAAGTCTGACATTTCCA CCAGGTTTCTCTTTTTTTCATTTTCTCTTTTTTGTATCCTTGATGGTGTGTAGTTATAAAATTATGTAGCATTACTTACT ATCATAACAACTATGGTGGTAAATCTGAGCTTTCTGTAACCGCGGGGGACTACTGCTTCCTGCTCTGTGTTCTCGGCCGA TATCTTTTGAAGGGTAGCACCAGTGTGAAGTACTAGAGTTCAGTTTCATAGAAGCTTACCCCATTTTGCTTGTTCTACCT CAATAGCAAGAGGGAAGATACAAGATAGGGTTTGGCTGGATCACTTTGATCAAGTGAAAAAGCCTTTATGTTGTATAACT TGTTATTAAATGGGGACCGGGGAAGACCCCCTTGCTATTATGGACTTTTGTATGTTATATAGTAAATATAAATGTCTTGT TTACCTTTCAGTTAAATTTCTCTGCAAAGAAGCTAATGCTGCTCTATATTGCATCCTGCTATAGTTCAATTAAGTGAATG TGACTATGAAACCGGAATCAATTTTGGCAAGAAGCTTCTGTGAGTAGCTTCTGAGTTTTAAAATTGATTATGATGAAAGA AAAAGTGATCCAAACACTAGTTTTAACTTCTTGACACTAATGTCAAAAATAGCCTTGCATTTTTCTTTAAAGGTCTTTTT GAGTGGGTTTGTATTTAGAAAGTGTTAGTAATTTCCAAACCACACTTTGAGAAAAGCTACAAGAGGATTTGGATTCTAGG AGATGAAAGTAGTAGCATTGCTCAACTGGTTAAAATGATTAAGCATCATTTGGATTATTCTCTGGTTTTTGCCCCTACTC TTTGCATCTCTCAGTTAAAGGTTCAACATAAGATTCGCCTCCAAAAAGTTGATACCAAATGTCCAAGGTGGAAAGAGAGG ATTTTCAGTCATGCGTGTGCTGAATCATTTGTTTAAAAGGAATAAAGGAACTTGTAAATAGAACAAGGTTGTGTGGGGGG CTAGCTAGGAGGTCCATTCTCAGTCATTCATTGCTTTAAAGCCAAACCCCATCCATCAAAAACTTTCACACCAAGAATAA TTAGCTGGAGTTAGAATCATGAATTTCTCCATCTTTTGATATTGGTCTGAATAATTCTTTAAACATCCACGTTGCTTACG ATAATTATTTGTCCACACCTCTAAATTGAGGTGGAAAGAGGTGGAGGAGGAGAGAGATAGGAAGAAAAGAAAAAGTAAGA GAGAGAAAGTATAAGATGTGATAGATGATAAGATGAGAGAGATAAAAATAAAAATAAGTGGAAATGAAGTGTATAAATAA TGAGGTGTGTATATATCATTACTCATTGGACAACCTGCTTTTCTAGCTGTGAAATAAGAATTTGGCTTTGTTTTCATGGT GGGGATTGGAGAACCTGCTTTTCTAGCTGTGGGGATTTTTGGATGCATTATTAGGCTGTTTGACTAGATAGAAAGCTATA AAATAGACTGAAATGATATAAATTACATCAAGTTTTATAATTTAAATGGTTTGAAATAAGGTAAGAATGAAGTCCAAAAT GATTTCATCAATCCCCCCTTTCTCTAATTGGGAGATATGGATGGGGGAGTCAATTTTGTTTTCTTTCTGTTTCATGGTAA ACATATCTA
CDS sequence (LotjaGi5g1v0260700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGGAACAGACATGACTGGTGGTAATGAAGTCAACCTCATTGAATCTAAGAATGTTGTGCCACTCAATACATGGGT GCTTATCTCCAATTTCAAGCTGGCTTACAATCTTTTGAGACGTGCTGATGGAACATTCAATCGAGAGTTGGCAGAGTTCC TTGACCGCAAGGTCCCCTGCAACACCATTCCTGTTGATGGAGTGTTCTCTTTCGACCATGTCGATCGAAACACTGGCCTC TTTAGCAGGGTGTATCAACAAGCTCATGAGAATGTGTCTCGGTGGGGGATTATAGATTTTGAAAAGTCCCTCAGCACCAA GCGTATTGTCCCGGTCATTATTTTCTTCCATGGTGGAAGCTTCTCACATTCCTCTGCCAACAGTGCTATCTACGACACTT TCTGCCGCCGCCTAGTGAGCAATTGTGAGGCTGTTGTGGTTTCTGTGAATTACCGGCGATCGCCCGAGCACCGGTATCCA TGTGCGTATGATGACGGCTGGTCTGCGCTTATGTGGGTTAAATCAAGGGCATGGCTTCAGAGTGGAAAGGATTCTAAGGT TTATGTGTACTTGGCAGGGGATAGTTCCGGCGGTAATATTGCTCACCATGTCGCTGTTAGGGCTGCAGAGGAAGATGTTG AGGTGCTAGGTAATATTCTTCTTCATCCGCTGTTTGGCGGGGAGAAGCGAACGGAATCAGAGAAGAAACTTGATGGGAAG TACTTTGTGAGGTTGCAAGACCGCGACTGGTATTGGCGAGCTTTTCTTCCCGAAGGCGAGGATAGAGACCATCCTGCTTG TAACCCGTTCGGCCCCAGGGGTAGAAGCATTGCAGGACTCAAGTTCCCCAAAAGCCTTGTTTGTGTGGCGGGTTTAGATC TCCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTCAGGCCATGATGTTAACCTTCTTTACCTTAAGGAG GCGACTATCGGATTCTACTTCTTGCCGAACAATGATCATTTCTATTGCCTCATGAAGGAGATGAAGAACTTCGTGAGTTC TAACTGTTAA
Protein sequence (LotjaGi5g1v0260700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGTDMTGGNEVNLIESKNVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPCNTIPVDGVFSFDHVDRNTGL FSRVYQQAHENVSRWGIIDFEKSLSTKRIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSNCEAVVVSVNYRRSPEHRYP CAYDDGWSALMWVKSRAWLQSGKDSKVYVYLAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGK YFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSIAGLKFPKSLVCVAGLDLLQDWQLEYVEGLKNSGHDVNLLYLKE ATIGFYFLPNNDHFYCLMKEMKNFVSSNC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 347 | 346 | 1.6E-92 | ||
| PANTHER | 12 | 348 | 337 | 3.8E-184 | – | |
| PANTHER | 12 | 348 | 337 | 3.8E-184 | – | |
| SUPERFAMILY | 106 | 345 | 240 | 1.43E-48 | ||
| ProSitePatterns | 113 | 129 | 17 | - | ||
| Pfam | 113 | 326 | 214 | 5.9E-58 | ||
| ProSitePatterns | 189 | 201 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0260700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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