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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0269400 |
| Transcript ID | LotjaGi5g1v0269400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT1G31050.6 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FYJ6|BH111_ARATH Transcription factor bHLH111; TrEMBL-Plants: tr|A0A072VPZ1|A0A072VPZ1_MEDTR BHLH transcription factor-like protein; Found in the gene: LotjaGi5g1v0269400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58253496..58257821) extracted from Lotus japonicus Gifu genome v1.2.
ACTCACGTTGCATATTTTATTGTCTCCCCTATTATTGATATTGATATAACCTACAATTTCATACGTCACTGAAAAATGGA GCAACAATTCCCTCCATAAATCCCCACCCCACAACAACAACAAAGAAACAAACTAATTAAGAGAGAGTGCATATCCAACC CTAGCTAGCTAGATCCATTATTCCACCAATACAAGAGAGAGTCAGAGCAAAGAAGGGAAAATAAAAAGAGAGATAATAGA AAAGATGACTGAAGATTGTGGTGGAAACACAGTTGCAACCTCCACTACCCCATTAAGCTGGTGGTATCTCCAAGCAAACT CTCTTTCTACTTGGAACGATTCTAATAAACATGCATGGAATAGCCAAATAAACCCAAACTCTTCCTCTTCTTGTGATGAG GATATATCTGTTTCTTCTACCTCTTTCACTAATGCCTCCAACCATTCAAGCCTCACCGTTGAGTCATCACGCAGGCTCGT TGAACCGCCGCATGCACCTTCTTCCTCCAACGAGTTCATGAGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTCC TATCGTAAGTTTTTATTTTAGTAAGATTCACAAACAAATTGTTCTGCTTATATATATTATGATGAATAAGATTATTTAGA CTTCTATATTTGTTGGGAGCTCTCTAGCATCCATCACATGTTCGAGTGGTGAATGTAATATTGCTATCAAATTGCTGTGA ATTAACTATGAAAATAGCCAATATGCAGCTATTTGATAGATTATTTTCAGGCAACTCTATTCTACAACTATCTTTTCAAG TTATTGACACGGTTACAGACCCTGTGTTTAAGAATTACATGCGGTGTATCGGTACACCACCCCGTGGACAGTAGACAAAG CATATTTGTTGTTGTTCAATGCTATTTTTTTATAACCCAAGGAAATGCATTAAAAGGTTGTTGTTACTTGCTATATCATT GACAAAGATAAGAAACCTAAGAGACTAATCTTTTAGGTCAAAAAATGCGTGAAATTTATGGTTCTTTAAGCTTGGTATAT GTAGGAGTTAATAATAGGGTTAAGTTACAATATCCACCCCAGAATTGCTCTTTTACTGAACCTAATTTTTTCATGAAATA ATTTATAGAGGTGTTGGATCAAATGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTTGATGCACTTTCATC TAAAAACATGGCTAGTGCTATGTTTGAACCAGCATGTGACTACTTGAAGAAACTTGACACAAGTTGGGACTATAGTGGTT CAACTTCATTCAACAGTTTTGAGAAGCACCTAAATGGGTTTAGTGAGGCACTTATTGAGAATAATGAAAGGTTGACCAAG CTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCAGAGCCAGAAGTTAGTAGTCATCAGTTAGATCCACAAACAAA CAACATGTCTTTGAATTCTTCTATGGATCATCATCACTATCCACAACCTTTTGGAGATTCCTCATCATGCTCTATTGAAG GAGTAAATAGTAAAGATTCTTCTGGAATGTTCCCTTTCTATGATCAGGAGATGAAGGTGAAGCAAGAATATCATCATGCA AGTGAAGCTGTGTTAGGGAAATCATTTAATGCAAATGGATATCAAAATGGATTGAATAGCCTTTCAGTGGGAGATAATAG TGGTAAATTTTACCATGGTTTCCCCAATCTTTCACCATGCACGAGAAATTCCTCAGATGTTATTTCATTTAACAATAGGC TAGGAAGGCCTGTTAATGTTGGAATCCATGCTCAGAGGCCTAATATGAAATACTCAAACTTATCTGAATCAAAGAAGCAG GGCCTTCAGACACCATCACAGGTGAGTTTATCAACTTGATTATATATGCATATCTCGAAACCCTCTATAATTGATTCTGA AAGCAAGAATCAGTTCTGGTTAAAAACTTCTGTTATTGTGTTTTTGGAAAATCCAAGTGGATACACCACTAGTAGGGTCC ACATCTAGCTAGTAACAAATAGTTGATTTTAGAAAAATGGATATCCACATCTAGTTGTATTCAAATTGAAACCAAACATG CACTTAGTAGTTTATGGGATCCATAATTGATTTATGGATCCCATAAACTACTAAGTGCATGTTTGGATAATGTTAATACC AAAAATAAACACACGTGCGAATAGATGTATAGTGGAAAATTACTGTGAGCTAAAATCAAGGTGAACATAAGCAAATTTCC TTAATTTTTGGGGTTATTCATCATGATTTTGTCTTCACCTTAGTTTTCTACTATATATCTAAATATGTACCGAGTTTCAT AGTTCTGATTGCAGAGAAACTAATATACTATATGTTCAAGCTTCTTTAATTTCTTGGTCGAAATTTGATTAAAAAAAGTC ATGCTTTAGCATAATTTAATTTGTCTATCAAATGTGTGCACCATGCAGATGAGAACTAATAATGGAAGAGGAGAGGGAAC AATACGTGAAGTAAAGAAGAAAAGATCAGAAGAATCATCAGAAGCAATCTCAAAGAAGCCTAAGCAAGACACATCAACAG CTTCTTCTTCAAAGGTAAACACATATAAAATTATCAACCATGAAATGATGAAGTGTAAAGAAAAGTAGAAAGTGGAGAAC TCCATTAATTTTAATTAAGAAACTTCTATTTATTGTTGAAAAGGTGCAGGCACCCAAAGTCAAGCTAGCGGACAAGATCA CTGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGGTTGCTACAGATTACACTATGGCCTATGCCTCTACCTTTTTTTCT TTTCTTTTCATCACCTTTACATAATTCTCAGTGCTCTACTTTTCTCTTTACCTACTGCATATAATGATCAATTTTTTTTT GTTTGATGAATAATTTCAGACAGATACAGCATCAGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAG TCCAGGTGGGTATCATTATACAAAGAAAAGTTTGCTTTCCCTGCATTATGAAACTATATATATAATACACAATTATTATT GTTGTTGCTATCCTCTTCATTTTATGTTCAGTGCCAATGAAACTAGACCTAGGATAAACTTCTTTAAAAAAATTCAAAGT TGAGTTGTTGATGTATAAGGGTAAAATAAACCCTTACATGTGCTCTTATCAATTAAATTTTGCATATAGAAAAAATCAAC TATAACTAATTATATAATGAAGAGTTATATAATGAAGAGTTGAATTTCTTGTAGTTTAATTCCTTTGAAGCAAGTGCATT TGCTATTCCATTACCTTACATTCATTAATATTTTGCAGCTACTGAGCAACCCTTACCTGAAGACAAATTTGCATAAGGTA AGAAATTTTGTTAATTAATATCTTTCAAATTTTCACTCTTACCAATGATTATTCTATTGACAATATTGCCTTTCATCCAG GATCCAAGGGGAAGCTTTGATCGAAAAGATAAGGAGGATGCAAAGCTAGACCTGAGGAGCAAAGGTCTATGTTTAGTTCC AACTTCATGTACTCCTGTAGTTTATAGAGAAAATACTGGACCAGATTACTGGACTCCAGCGTACAGAGGATGTTTGTATA GGTGAAAAATGTATATAGTATGTGAATGTATGCAGAATCTTGGATAAATTAAGGTCTAATGAATAAACTATATAGCAGGG TGAAAGTAACTACTTGTAAAATAATGAGTAAACATGGGTTATATGAGTAAACACGTTTTGATTGACCTAAAAAGATGCAT ATATAAAGTGTTGCCAATTAAACTTGGTCATCATAGGACAAGTTACATGAATGGGTTACAAATATCAAAGCCTTGCTAGC TATACTAATTAACACTAGTAATTGATGTCAATATTGAACCAATCAACACACAATTACCTCATTTATATCACATTCACAAC GTTCCTAGCTTCCATGTACACAAATCCTTTCATATGATCTACAGCAAATGCAAAAATATTATCAATTGGCAACACTTTAA TGTCAGCAAACTTCTGCATCAGACAGAAAGCTTACAGCCTCTGGCGCCCAACCTGCAGCAAAAACCTAGCAAAGGATGCA AAAAAAAAGGAGCACGAATAAAGACGTTTGAAGGTGATGCTGAGAATTTTAGCTAGCAAGCAAGATTCAATATATTTTGT TTGAAAAAAAAAATCTTCATCTCCCCCAACCCATATGTGTCCAGCTCTTTCAACTTAAGCTATCACTGAGTGTCAAAGGC ATATGATTGATTTTAAGTGAGAGAACAATTAATTGCTTTGTTGTTCAACTTATGTTTTTCACACAACTGCATCGTGCAAC GGCGGG
CDS sequence (LotjaGi5g1v0269400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGAAGATTGTGGTGGAAACACAGTTGCAACCTCCACTACCCCATTAAGCTGGTGGTATCTCCAAGCAAACTCTCT TTCTACTTGGAACGATTCTAATAAACATGCATGGAATAGCCAAATAAACCCAAACTCTTCCTCTTCTTGTGATGAGGATA TATCTGTTTCTTCTACCTCTTTCACTAATGCCTCCAACCATTCAAGCCTCACCGTTGAGTCATCACGCAGGCTCGTTGAA CCGCCGCATGCACCTTCTTCCTCCAACGAGTTCATGAGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTCCTATC AGGTGTTGGATCAAATGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTTGATGCACTTTCATCTAAAAACA TGGCTAGTGCTATGTTTGAACCAGCATGTGACTACTTGAAGAAACTTGACACAAGTTGGGACTATAGTGGTTCAACTTCA TTCAACAGTTTTGAGAAGCACCTAAATGGGTTTAGTGAGGCACTTATTGAGAATAATGAAAGGTTGACCAAGCTATCTAA TCTTGTAAGCACTTGGTCTATTGCCCCACCAGAGCCAGAAGTTAGTAGTCATCAGTTAGATCCACAAACAAACAACATGT CTTTGAATTCTTCTATGGATCATCATCACTATCCACAACCTTTTGGAGATTCCTCATCATGCTCTATTGAAGGAGTAAAT AGTAAAGATTCTTCTGGAATGTTCCCTTTCTATGATCAGGAGATGAAGGTGAAGCAAGAATATCATCATGCAAGTGAAGC TGTGTTAGGGAAATCATTTAATGCAAATGGATATCAAAATGGATTGAATAGCCTTTCAGTGGGAGATAATAGTGGTAAAT TTTACCATGGTTTCCCCAATCTTTCACCATGCACGAGAAATTCCTCAGATGTTATTTCATTTAACAATAGGCTAGGAAGG CCTGTTAATGTTGGAATCCATGCTCAGAGGCCTAATATGAAATACTCAAACTTATCTGAATCAAAGAAGCAGGGCCTTCA GACACCATCACAGATGAGAACTAATAATGGAAGAGGAGAGGGAACAATACGTGAAGTAAAGAAGAAAAGATCAGAAGAAT CATCAGAAGCAATCTCAAAGAAGCCTAAGCAAGACACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAG CTAGCGGACAAGATCACTGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCAGTGCTGTTTGAAGC AATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACCTGAAGACAAATTTGCATAAGGATC CAAGGGGAAGCTTTGATCGAAAAGATAAGGAGGATGCAAAGCTAGACCTGAGGAGCAAAGGTCTATGTTTAGTTCCAACT TCATGTACTCCTGTAGTTTATAGAGAAAATACTGGACCAGATTACTGGACTCCAGCGTACAGAGGATGTTTGTATAGGTG A
Protein sequence (LotjaGi5g1v0269400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEDCGGNTVATSTTPLSWWYLQANSLSTWNDSNKHAWNSQINPNSSSSCDEDISVSSTSFTNASNHSSLTVESSRRLVE PPHAPSSSNEFMREHASDNQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKNMASAMFEPACDYLKKLDTSWDYSGSTS FNSFEKHLNGFSEALIENNERLTKLSNLVSTWSIAPPEPEVSSHQLDPQTNNMSLNSSMDHHHYPQPFGDSSSCSIEGVN SKDSSGMFPFYDQEMKVKQEYHHASEAVLGKSFNANGYQNGLNSLSVGDNSGKFYHGFPNLSPCTRNSSDVISFNNRLGR PVNVGIHAQRPNMKYSNLSESKKQGLQTPSQMRTNNGRGEGTIREVKKKRSEESSEAISKKPKQDTSTASSSKVQAPKVK LADKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKTNLHKDPRGSFDRKDKEDAKLDLRSKGLCLVPT SCTPVVYRENTGPDYWTPAYRGCLYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 505 | 505 | 2.7E-119 | – | |
| PANTHER | 1 | 505 | 505 | 2.7E-119 | – | |
| MobiDBLite | 60 | 93 | 34 | - | – | |
| MobiDBLite | 60 | 75 | 16 | - | – | |
| MobiDBLite | 325 | 396 | 72 | - | – | |
| MobiDBLite | 330 | 358 | 29 | - | – | |
| MobiDBLite | 360 | 380 | 21 | - | – | |
| MobiDBLite | 381 | 395 | 15 | - | – | |
| ProSiteProfiles | 385 | 434 | 50 | 9.718 | ||
| CDD | 400 | 439 | 40 | 3.46983E-5 | ||
| SUPERFAMILY | 400 | 450 | 51 | 2.88E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0269400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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