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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0271500 |
| Transcript ID | LotjaGi5g1v0271500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid transporter family protein; TAIR: AT2G39130.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|A0A072VPC5|A0A072VPC5_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi5g1v0271500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58522553..58529283) extracted from Lotus japonicus Gifu genome v1.2.
GAACCACGAGTGTATATCACCAGAGTGTGAGAAAGAAAAGCACGTAGCCACTTGTTTTTTCTTCACTTTGTCTTCATCTT TTCCTTATAGTTTTCACTATTTTTTTTAATCCAAAAGAGAAAGAAAAAGCAAACCAATCAAAAGGTTCTGTTCATGTCAT GTACTAGTACTTACTTTCTGATTCTTAAAAACTTTTCTTCTGTCTTGTTTATTTTTTGTTGGTGTTTTGTGATTATCAAA ACGTGGTGTTAATACATGCACAATTGCACAGTAGTAAAAGTGTGATACTTGAAACTTTTCCTCACAGAAAATCTGTCATA TTTATGATGAATATATATTAGGAAACCTTTCAAATTCAACGCATATTTGTCGTCATACCCTCTTGTAGTTTCCATTTTAG TTCCAGTGTAGAGTGAAGATTATGATACTCATTATTACTCTCAGATTTTGAAGTTGCAAAATTAGCTCAAATCTGAGTTT TTTTCCCTTTTATAAGGTGTTCTTGTGTTCTGTTTTGTAATTCTGGGTCATTTTGTGAAGGTGAATTGCTCTAGAGGTAG TAGTGGGGTGTCCTTGTGAAGGAAGATGAATCATAACTTTGTTTCAGACAACAGTCTTATTCTTGAGAGTGATGAAGAAG ATGAGGAGAAGGATTTGAACAAAGGTGAAGGTGATGGTAATGATTCTGATTCTTCCAATTACTCCAATGAAAATCCTCCA CAGAGGAAGCCTAGTTCCTACAACATCTCATGGCCTCAGAGTTACAGGTAAATACTTCTAACCCTTGTTTCAGTTCCACT GGATTTGTGAAATTCTTCTGTTTTGCTATGGTTGAGTTTGTGTGTATGTGCATATTTCAAGGGATTCCTCTGATTTATGG AGATATATGGTTGACTGTCCTTTTCTTTTCTTCACTTTTTGTTATCCTCCTTGTTGTAAAGTGATTTAGCTTTTTGGGTG AGTGTAAATTTTCCTATGAACTTTTCTGATTAGTTTCAACTATGAAGAAAACAGAATATTCTTCTTGTTTTTACATAGCC AAGAAACTAAGCCAAAAAGGTTGAAAATTTCGCCAACCTTGACATTGGATAGCATTTTTTCCCCTTCATATATCATTTTG CTGAACAAATCTGTTGTGTTTGATCCATAAGAAAGATATCGGCTAGTTTAACGTTGGCTGCTGAAGGTCTAATACAGCCA ACTTCAATGGCGTAGTGTGATCCATATAGCCCACTTCACTTAGTGGGATAAGGCTTTTGATGTTGTTGTTGTTGTACATC ATTTTGCTGAACAAGGGTCAGTGTCTTCTTAGTCAAGTGCATTTCCTGAATACTTATGCTTTTGTGATTGATGTTTCAGG CAGTCTATTGATCTCTACAGTAGTGTGCCATCACCAAATATTGGATTTCTGGGCACTCCCTCATTGAACAGATTGAGCAG TTCCTTCCTTTCTACATCTCTGACAAGGAGGCACACTCCCGAAGCACTTCCTTCAGTGTCGAAACCTCTGATACAACCGA CTGAAGAGGAGCCACAGAGGCGAAGCTCTCACGCCTTGCTTCCCCCTCTTGCTAGGAAGTCTTCTTTGATTAAGAAGGAT GCCAAGGTTTCTCATCATGAAATTCCTTCTCGCCAATGCTCCTTTGGACAGGCTGTGCTTAACGGTTAGTAGAGGGAACC TTGACTTGCAATACTCTTGATCTATGGCCTAGATATCTTCTTTCCTTTTTTACTAAATTGCTTTTGCAATTCAGATAGTT TGTGTTGAAGGCCAAAGGTCTTCCTAAGAGTGTGGCTCCAAGTGACCGAACTTTTGACCTAGAGGTTGAAACAACCACTT TTAACCACTACCGACACCTAGGTGCCTGGATATCCCTTTTAGGGGGAGGGGGTGACCGTCTGAGTATATGAAAAAAGAAG GATGGAGAAATAATAGCCAAGTAGGAGGATGTGATTAGTAAAGTAAATTAAACACATGAAAGAAACAAAGGATACAAATT ACTTGGTAGATTGAATTTACTATCTGAATGCAAAAACTGACATATGTTGATTGAAGAGCATGTATATTTGTTTACTGACA TCCTATGAGACTCCTATGCAATACATAAAACCATAAATGTTATTGCAGGCATAAACCATATCAGTCTACCGAGTTTATGC CGTGTTCTTATTTTGGATTTTTGCAGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCGAAAC AAGGTGGATGGGTCGGGCTTTCTATCTTGTTCCTTTTTGGAATCATTTCCTTCTATACCGGGCTGCTCTTGCGTTCCTGC TTGGACAGTGAACCTGGTATTGAGACATACCCTGACATTGGTCAAGCTGCTTTTGGTACTATTGGACGTATTGCCATTTC AGTAAGTCTTCATCTTGATCTCTACTCTTATTCTTTATTTTTTTTCTTTTTTTGAGATTGTATGTTAATTAAAAATCAAC AGTGTCTAATCTCTTTCTTATGCTCTCTCCTTTTTTTTGGATGCAGATAGTATTGTATGTGGAATTATATGTAAGTACAA TTTCCCTCATTCAGTTACCATTCCATTTCGAGTGACACTCATTGTAATTTGAAATAGCAAAATAATATAATGATGAAAAT CTGAGTGGCTACCTGTTTGGATTCTCACAGTTGCATCATTTGCATTTGTTTCAGTCTTGAACTTGTGAAAGTTAGAATTG GCTAACAATGCTTCCGATACCTTTTACCATGTGTTTGTCCTCATTAAAACCATGCTGTTATGCTGATACTTACCACCAGT TCTTCAAGGTTTTTTACTTTTTAGCAATTACTTTAATTTTCCTATTGAACATTTCTTCATGCAGGGTTGTTGCATTGAAT ACATAATTTTGGAGGGCGACAACTTGGCTACCTTATTTCCAAATGCATACTTAAATTTGGGTGGAATTGTATTGAATCCA CAAACTTTGTTTGCTATTATCGCCACCTTGGCTGTTCTTCCAACCGTTTGGCTCCGTGACCTAAGTATTCTCAGTTTTAT CTCAGGTAAAACTTATTTTTGTTCAAGTAATGATTAATTATCCATTGATCCATTCTTGAATAAAATTAATCCTGGTCTCA TTTACCTTTGGCCAGAGGGCATTTTCAAACTTTATTTCTTTAGTTGCTGTCGTTGAAACTTATTTACTCATTGCCCATGA ATTTGTCCTTTGTTCATGTATTACTATTACTATTATTATTTTGATCTTATTATAACTGTTAGTTATGTGTTTGTTATAGC CGGTGGAGTTATTGCATCAGTTTTAGTGACTATCTGCTTGTTCTGGGTTGGCGTTGTGGACGTTGGCTTTCAGAGCAAAG GGACAACACTCAATCTTACAACTTTTCCTGTTGCATTGGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCA AACATTTATACATCCATGGCAAAGCCAAACCAGTTCCCTGCAGTGCTCTTAGCATGGTAAATAAACCAAGGACAATTTTA GCCACTGTCTATAACTCTTCTGCCCCTAATCCTTTCATTATATATTAGATCCCCTTAAGTCTTACACAAATTGCAATATC CTTGAATATTAAAAAATATATATGTCAGTCCCCGCATATATCAACCTGCATTTGTCCGCAATGCAGCCGCAACCACAATT AAAAACCCTTCAGATCATCTAGCAGTTAGGCATGAATGCCTCTAGATGTGGGATATATGTTGTTGTAAAAGTTTTTATTT TCTTCAGAGGAAGCTCTCTCTCTCTGAATCTATCAAGTATAATATGTCATTTTTCTTTTCATTGTAGTTTTGGAATTTGC ACCTTCCTATATGCCGCCGGGGCTGTTATGGGATACAAGATGTTTGGAGATGCTATACTATCTCAGTTCACTCTTAACTT GCCTCAAGATTTGGTGGCAACCAAGGTTGCTGTGTGGACAACGGTATACCCATTCTACATTCTATTGCAAATCTTTTCAT AGTAGACTATGCTTATTCTATAACATGTAAAGCTTGATTATATTTTCCTTTTATACCTTTCCTTTTCTCCATTAATATGG ATCTTAGAGTAAAGAACCAAACTTGGGTCTGAACCTAATAGTTTAACCTTTTGAAATAATTAATTCTTGAATAACCTTTG AACCTCTATGGCCATTGTTCAAGTAGGTTATGAGTTCAATTTTGATGCCTCCATTTCATAATAAAATTTTAATTTAAGCA TTAATTTTAGATAGGCTGGTGATTTATCCATGTATCAAACCAACAAGCTTTTGGCCTAAGAAGGGTGTTGGAGGTAAAAA TCACATGTAACCCTGGTTATGGATATTTTCCAAAGAGGCTCTCAAAACTACTACTTTTCATGTTTTGTGTGCTGGGCATG GGGAACTGGGGAAGAGCTTAGTTATTATTGGCTCAAATGCTCAATTATTACTATCACATTTAGTTTAAGTGTTTAGTTCA ATATCAACATATTGTTAATATCCCATTACCCACATAAATTGCTAACACTGTTGTCTGTTACTTTTGTTTTTGCAGGTGGT TAATCCATTTACCAAATATCCTTTATGCACGCATATTTCTATAAATTTTGATGTCATTCAGCATAAAGAATGATAAATTT GAAATTTCTTTCTTCTTTTTCAGTGATATCATAGATAAATATGAATGAGGAATTCTGTTGCTTACAATATAACTTTGCAC CCTGAGAGCAATAAATGGTGCAAGATTAAGAATGTTTCTCATGACCATCATGCTTCACTTAATCAAACATCATAGAAGAC CTACATGCCCTGTCTTGGACTCCTTTTCATGTACAATAGTTAAGCTAAAGGTTGTATTTGGCATAAGAGAGCATGTCCTC ATAGCATTTTTAATTCCATTAGTTTCTTTTTGGATAGGGATGGTGGCAAAAAATACAAAGAAAATAATAATATTATGGAA GATTATTTATCCATAAGACTTTCTGCCTATTTTTTTTCCATGACTAAAATATCCACTCTTAAAAGCACAAAAAAGAAGAA GAGGATAATGTTCAATTCATGTTAATTATCCTTATTCAAATTACATTGTTTGAGCTAGGATTTTGTGACATGTCATTTCT CCTGCATTCTTTGCATTGAGCATTCCTGCAATGAAGATGAAAAAAAAAGTCTTTTCTTAACTAGCATCACGTATGCGCTG ACTATATCTCCAGTGGCAATGAGTCTAGAGGAATTGATACCATCAAACAATGCCAAGTCTTACCTATATTCCATCTTCAT CAGAACAGGGTTGGTAGTGTCGACCCTGCTAATTGGTCTGTCAGTTCCCTTTTTTGGTGAGTGTTAATTTTTCCTATATT CATGTGCTTGAGTGTTGAATGTTGATCAATTCCACTTCCATCTGGAACTGTCTCTGCAATACTATTCCTTTACTGATCTT AAATCTTAATTTTTTTTTCCAGGTCTGGTTATGTCTTTGATTGGATCACTGCTTACAATGCTTGTTGTAAGTTCCCTTCA TTTTATCTGTTATTTTCCCTACAGTTATTGATGATAGCATTTCACTAATTAAAATCAACCTTGATGACAGACTTTGATAC TACCCTGTGTTTGTTACCTGAGAATTTTGCGGGGAAAAGTCACCCGATTACAGGTAATGATAATTGCACTCTTGATTTAT TCAATGTGATCATTAATTAATTCATTCTTGTTGTTTCAGTGAGCATTTGGATCATGCCATAGTCAAGATATTTTTGCCAT GCCACTGGTTGTGACTCAATTTCATTTCATATGTCTGCAGGTAGCACTTTGCATTATAATTATTACCGTAGGTGTTGTAT CTTCTGCCTTTGGAACATACTCAGCACTTTCCGAGATTATTAAGAGTTTGGGTGGATGAAGTTTTGTGGCTTAATTCATG GAAGAAGATGAGATTTGTCTACTATTATCTAGCCCTTTCATTTATTTTATCCATTTTGATTGTTGATCCCCAATTTTGAG TTCATTTTCTGTGGTTTCTCCATTTTGTTGCTAGTATTTGTGGTTATTATTCTGGTTCCTAGTTTACCTTTGTTATGACA AGTTTTGCTCGGGATTGAAGTATTGGAATTGATAAAGCACCATCCTATAGATGGTGGCAGAGAAATTAAATGATACGGTT GAAGAGATTTCTTGTTCTTTCTACTTGAAAATGTCTAGTGCAATCTCTTGGTATGATACAGTATCTCCATCACTATTTAA TGCAGCAATATGGTGCTCACCAAAAGTGCTCCAAGATATAAATGATATAGCACAAAGGATTAGAATGACATTTGTTTATA TTTTCATTCAAGGGATCAAGATTCTGTAATGTGGAAACTTCACATGACATTGTCATATTGAAACTTCAGATGTTGTTGAC ATTGTCATGTGACATGAGAAGATCATAATCCAAATGACAACCATGTGTATCCGCTCGGCTTGCGTGGCTCATACTTGTTC CTTGACTTTTACTTTATATCCTTGTGATTTCTTTCATAAATCTTGGAGAATAAAGACATGGTTGGATGAGTTCGAGTTGT GGTTGCACCTTTGAAGCTAGTTATAACACATTAATTTCACTTGACAATGGTCTTTCATCTCACTTATACTAATCATAAAT TTTAAAGACTTATGATATTACACATTATTCAGTCAAGGGCCAAAATTGACATTAACAACTATCGAAAGCTGATCTTTTTT TTTTCAAAGTG
CDS sequence (LotjaGi5g1v0271500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCATAACTTTGTTTCAGACAACAGTCTTATTCTTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAACAAAGG TGAAGGTGATGGTAATGATTCTGATTCTTCCAATTACTCCAATGAAAATCCTCCACAGAGGAAGCCTAGTTCCTACAACA TCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTCTACAGTAGTGTGCCATCACCAAATATTGGATTTCTGGGCACT CCCTCATTGAACAGATTGAGCAGTTCCTTCCTTTCTACATCTCTGACAAGGAGGCACACTCCCGAAGCACTTCCTTCAGT GTCGAAACCTCTGATACAACCGACTGAAGAGGAGCCACAGAGGCGAAGCTCTCACGCCTTGCTTCCCCCTCTTGCTAGGA AGTCTTCTTTGATTAAGAAGGATGCCAAGGTTTCTCATCATGAAATTCCTTCTCGCCAATGCTCCTTTGGACAGGCTGTG CTTAACGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCGAAACAAGGTGGATGGGTCGGGCT TTCTATCTTGTTCCTTTTTGGAATCATTTCCTTCTATACCGGGCTGCTCTTGCGTTCCTGCTTGGACAGTGAACCTGGTA TTGAGACATACCCTGACATTGGTCAAGCTGCTTTTGGTACTATTGGACGTATTGCCATTTCAATAGTATTGTATGTGGAA TTATATGGTTGTTGCATTGAATACATAATTTTGGAGGGCGACAACTTGGCTACCTTATTTCCAAATGCATACTTAAATTT GGGTGGAATTGTATTGAATCCACAAACTTTGTTTGCTATTATCGCCACCTTGGCTGTTCTTCCAACCGTTTGGCTCCGTG ACCTAAGTATTCTCAGTTTTATCTCAGCCGGTGGAGTTATTGCATCAGTTTTAGTGACTATCTGCTTGTTCTGGGTTGGC GTTGTGGACGTTGGCTTTCAGAGCAAAGGGACAACACTCAATCTTACAACTTTTCCTGTTGCATTGGGTCTTTATGGTTA CTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATACATCCATGGCAAAGCCAAACCAGTTCCCTGCAGTGCTCTTAG CATGTTTTGGAATTTGCACCTTCCTATATGCCGCCGGGGCTGTTATGGGATACAAGATGTTTGGAGATGCTATACTATCT CAGTTCACTCTTAACTTGCCTCAAGATTTGGTGGCAACCAAGGTTGCTGTGTGGACAACGGTGGTTAATCCATTTACCAA GTATGCGCTGACTATATCTCCAGTGGCAATGAGTCTAGAGGAATTGATACCATCAAACAATGCCAAGTCTTACCTATATT CCATCTTCATCAGAACAGGGTTGGTAGTGTCGACCCTGCTAATTGGTCTGTCAGTTCCCTTTTTTGGTCTGGTTATGTCT TTGATTGGATCACTGCTTACAATGCTTGTTACTTTGATACTACCCTGTGTTTGTTACCTGAGAATTTTGCGGGGAAAAGT CACCCGATTACAGGTAGCACTTTGCATTATAATTATTACCGTAGGTGTTGTATCTTCTGCCTTTGGAACATACTCAGCAC TTTCCGAGATTATTAAGAGTTTGGGTGGATGA
Protein sequence (LotjaGi5g1v0271500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNHNFVSDNSLILESDEEDEEKDLNKGEGDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGT PSLNRLSSSFLSTSLTRRHTPEALPSVSKPLIQPTEEEPQRRSSHALLPPLARKSSLIKKDAKVSHHEIPSRQCSFGQAV LNGINVLCGVGILSTPYAAKQGGWVGLSILFLFGIISFYTGLLLRSCLDSEPGIETYPDIGQAAFGTIGRIAISIVLYVE LYGCCIEYIILEGDNLATLFPNAYLNLGGIVLNPQTLFAIIATLAVLPTVWLRDLSILSFISAGGVIASVLVTICLFWVG VVDVGFQSKGTTLNLTTFPVALGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLLACFGICTFLYAAGAVMGYKMFGDAILS QFTLNLPQDLVATKVAVWTTVVNPFTKYALTISPVAMSLEELIPSNNAKSYLYSIFIRTGLVVSTLLIGLSVPFFGLVMS LIGSLLTMLVTLILPCVCYLRILRGKVTRLQVALCIIIITVGVVSSAFGTYSALSEIIKSLGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 158 | 158 | - | – | |
| MobiDBLite | 1 | 54 | 54 | - | – | |
| MobiDBLite | 31 | 54 | 24 | - | – | |
| PANTHER | 40 | 534 | 495 | 1.9E-212 | – | |
| PANTHER | 40 | 534 | 495 | 1.9E-212 | – | |
| MobiDBLite | 97 | 126 | 30 | - | – | |
| Pfam | 153 | 533 | 381 | 1.2E-68 | ||
| Phobius | 159 | 178 | 20 | - | – | |
| Phobius | 179 | 183 | 5 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 184 | 204 | 21 | - | – | |
| Phobius | 205 | 230 | 26 | - | – | |
| TMHMM | 220 | 242 | 23 | - | – | |
| Phobius | 231 | 251 | 21 | - | – | |
| Phobius | 252 | 262 | 11 | - | – | |
| Phobius | 263 | 285 | 23 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 286 | 296 | 11 | - | – | |
| Phobius | 297 | 320 | 24 | - | – | |
| TMHMM | 300 | 322 | 23 | - | – | |
| Phobius | 321 | 339 | 19 | - | – | |
| TMHMM | 335 | 354 | 20 | - | – | |
| Phobius | 340 | 359 | 20 | - | – | |
| Phobius | 360 | 370 | 11 | - | – | |
| TMHMM | 369 | 391 | 23 | - | – | |
| Phobius | 371 | 391 | 21 | - | – | |
| Phobius | 392 | 410 | 19 | - | – | |
| Phobius | 411 | 430 | 20 | - | – | |
| Phobius | 431 | 450 | 20 | - | – | |
| Phobius | 451 | 472 | 22 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 473 | 477 | 5 | - | – | |
| Phobius | 478 | 500 | 23 | - | – | |
| TMHMM | 481 | 503 | 23 | - | – | |
| Phobius | 501 | 511 | 11 | - | – | |
| TMHMM | 512 | 534 | 23 | - | – | |
| Phobius | 512 | 534 | 23 | - | – | |
| Phobius | 535 | 543 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0271500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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