Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi5g1v0272400.2

Overview

Field Value
Gene ID LotjaGi5g1v0272400
Transcript ID LotjaGi5g1v0272400.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description ATPase ASNA1; TAIR: AT3G10350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O27555|ARSA_METTH Putative arsenical pump-driving ATPase; TrEMBL-Plants: tr|I1NHH3|I1NHH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0272400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:58589859..58593164) extracted from Lotus japonicus Gifu genome v1.2.

TTGTGCACCTATTGAGTGTTTGACAACTCATTTTTATGGTTATTTCCTGATTTTGTTGTTAGTGAGATCGGTGGCTGCTC CTGCAGAAGCTGTAGCAGGGTTTGATGACATGGTTTCTGGGACTGAGAGGAAGTATTACTTGCTAGGTGGGAAAGGTGGG GTAGGGAAGACCAGTTGTGCTTCTTCGCTTGCTGTTAAATTTGCCAACAATGGTCACCCCACTCTTGTGGTTTCCACTGA TCCAGCACATTCTTTGAGCGATTCTTTTGCACAGGTTATTTACACATTTTCTAGTTTTGATGATGCTTGTGTGCTAGGTG CTTCAATATCTGGTTGCATATGTGCTCTGTGTAACACAAGTTTTGCCTATTTTACTCTAGGATTTGACAGGCGGGCTATT GGTTCCAGTGGAAGGACCTGATTCTCCGCTTTTTGCTCTTGAAGTAAGCTGGCAGTGCTGTATAATAAATCAGCTGATAT TTACATGAGGACTTACATGATTGGTATTTTTGTGAGAATTACGTCTTTACTTCAAGTTTGTCACTTCCGTTACAGATAAA CCCCGAGAAGGCTAGGGAAGAGTTTCGAAATGCAGCCAAAACAAATGGTGGAAGTGGTGGAGTCAAAGACTTCATGGATG GAATGGGTCTTGGAATGATTGTAGACCAGGTAACGCTTTACTGTGATGTTATCAGCATTTCTGGTTATGTATCTTTCCGA GACAATATTTTATGTCGTTAGTATTTATCTCTCGACTGCATACCTTTTTACATGTTTAACTTTTATGAAATTTTGTTAAG CAAGATTAATGTTATAACTAGGAAACTTCATTATAATTTATAAGCTCGCTTCACTAAGATGGGTTTTTGCTTCTCTTGGT TGCAAAAGCTGGGAGAGCTAAAACTTGGAGAGTTACTGGATACACCTCCTCCTGGACTGGATGAAGCTATTGCAATTTCC AAGGCATGCATTTTTTATGTGCTATGATGATTTGTTTCATTGCTAAAATATTCATGCAACAAACCCTTTTTGCTCTCATG ACAATTAAAACTCCCTTATCAGGTCATTCAATTTCTTGAATCACCAGAATATAGCATGTTTACTCGTATAGTATTTGACA CGGCACCTACGGTGAGCAAAATGTTAATAGTTATACATATATATATATGTATATATATATGTATTTATATATATATATAT ATATTTCACATCTCCTTTCCTTTGTTTTGGACATTATCTGATAGAATTTACGCACTTTTGTGAATAGGGTCATACATTGC GGTTATTGTCCTTACCTGATTTCTTGGATGCCTCCATCGGGAAGATACTAAAGGTAAGGCTGCTAAATTTAGTAGAGGAA AGTCTACATGTGCCCTTGCGTGTGTGCACATATTTCTTACTTGAAATACAATTGATTCGCTTCCTTTAGAAGCCCTGGAT AAAATACTGAATTTAATACCCAATGCAATGCCTGAGATCTTTTGAAATACACTGATTATGTTCTTGGAGCTATAAACACT GGATGTAAATTTTCCAGCCACCCAGCCAGTTTTGAATTGATAGTTTACCTGTGAGGATGTCTTTACCAAATTATGTTATG AAATTGTTACTATTCTATTTTTCCTTTCATACTCAGTTGTTTCCCCCCTCTTCTTGCCAAACTTGTATATGCATCCTATT ATTTAAAATGTAAATCTGTATCTTTTCTATTTATAACATAACATCTGTGTAGAGGCAGAAAGAATAAATTGTTAACATTT GTCTATTGACAATTCCCTCTTCCCTCTCCCATGCCCCTGTGCAAGCATTATGTATGCCTGATTCATGGTGAGATTTCATC AGAGGTTAGCTGATAGGTGGTAGAGATTCAAAGTTTCTATTATTGCAATGCTTTAAACTTATGAAATTTCGCTTCTACTG ATGAATATCCAGACCCCCCCCCCCCCGAAAAAAAATCACCTTCAAAGTTAAGTTCCAATCTTCAGGTTATCCTTATGGCT TATGGTCATTGATACCAATTATTCTTCTGCAGCTAAGACAAAAGATAGCTTCTGCTACCTCAGCAATCAAATCCGTTTTT GGACAAGAAGGAACTCGACAGGATGCTGTAAGATTCTTACTATGGGGCTAGCGTTGCATGTAGTTTCATCTTACTATGCT TACCATTCATTATATCCTGATGGTGCAGGCAGACAAATTGGAGAAACTTAGGGAGAGGATGATAAAAGTGCGTGACCTAT TTCGTGACACGGATTCGACAGAATTTGTCATTGTTACAATCCCCACGGTATGAACTTTGTTCCACAGCTGACTAAACTTT GAATAACATGCATATAATGGTCGATTACTTATGATTTAGTGTCACCAACTCTACCAAGAATGATCAGAAGACTTTGAAGG GATTCAAATTCTTCTGAACAAATGAAACCAGGTTAAATAATAGGGCTTTGGTTTTTTACATTATGTTTTAACAAGAAATA AGTATCAAGAGAAGTAAAAAATTGAAAAATAGAAGTGTGCTGTGCTTGGCGTTTTGAGGGATGGATAGAAGCGAAAAGGA ATATAATAGAGGTTATTTGGCTCAGTGATTTCCTGTAGAAAATGGATGTGGAACTAGTCTTGTTGCCAGATCTCTTTCAC TAATAATAAACTAAGTCTTTTGATTAAAAGAAAAAGACAACTAAATCTGTTTGGTTTTAGAAGAAACACAATGTCATTGT TGGACTTACGTAACCAATTCCATCCAGCAGAAAAAAGTTTGTGGTTGTTCTGAATACTGATTGAAAGACAACTTGGTTAT GTAGTTCTTAAACTTCATATTTGTTATGTTGGAAAGAGGGAACTACTGTCTAAGTAATATTTTATCTTTGTGTCTTTTAT CCCCAAGGTGATGGCAGTTAGTGAGTCATCTAGATTGAGTGCATCCTTGAAGAAGGAAAGTGTTCCTGTGAAGAGACTTA TCGTCAATCAGATTCTTCCACCATCTGCATCTGATTGCAAGTTTTGTTCTATGAAAAGAAAGGTACTTCCATCGTTTTTT TTTTTGCACAGGTCTACGCTGAATTGAGAAAAATAGTGTAAAGTGATCAAACTAGAAACATTTGCATTTGCTGTATTCAT TTTTATTTGAAGGGTGAAAACTTACTGTAAAATAAACTAACTTTTCAGGATCAGACGCGTGCTCTTGATATGATTCAGAA TGACCCAGAACTCTCCTCCTTATTGATGATTCAAGCACCCCTTGTTGATGTAGAGATAAGAGGTGTTCCAGCTCTCAAAT TTCTGGGTGACATAATTTGGAAATGA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0272400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTTCTGGGACTGAGAGGAAGTATTACTTGCTAGGTGGGAAAGGTGGGGTAGGGAAGACCAGTTGTGCTTCTTCGCT TGCTGTTAAATTTGCCAACAATGGTCACCCCACTCTTGTGGTTTCCACTGATCCAGCACATTCTTTGAGCGATTCTTTTG CACAGGATTTGACAGGCGGGCTATTGGTTCCAGTGGAAGGACCTGATTCTCCGCTTTTTGCTCTTGAAATAAACCCCGAG AAGGCTAGGGAAGAGTTTCGAAATGCAGCCAAAACAAATGGTGGAAGTGGTGGAGTCAAAGACTTCATGGATGGAATGGG TCTTGGAATGATTGTAGACCAGCTGGGAGAGCTAAAACTTGGAGAGTTACTGGATACACCTCCTCCTGGACTGGATGAAG CTATTGCAATTTCCAAGGTCATTCAATTTCTTGAATCACCAGAATATAGCATGTTTACTCGTATAGTATTTGACACGGCA CCTACGGGTCATACATTGCGGTTATTGTCCTTACCTGATTTCTTGGATGCCTCCATCGGGAAGATACTAAAGCTAAGACA AAAGATAGCTTCTGCTACCTCAGCAATCAAATCCGTTTTTGGACAAGAAGGAACTCGACAGGATGCTGCAGACAAATTGG AGAAACTTAGGGAGAGGATGATAAAAGTGCGTGACCTATTTCGTGACACGGATTCGACAGAATTTGTCATTGTTACAATC CCCACGGTGATGGCAGTTAGTGAGTCATCTAGATTGAGTGCATCCTTGAAGAAGGAAAGTGTTCCTGTGAAGAGACTTAT CGTCAATCAGATTCTTCCACCATCTGCATCTGATTGCAAGTTTTGTTCTATGAAAAGAAAGGATCAGACGCGTGCTCTTG ATATGATTCAGAATGACCCAGAACTCTCCTCCTTATTGATGATTCAAGCACCCCTTGTTGATGTAGAGATAAGAGGTGTT CCAGCTCTCAAATTTCTGGGTGACATAATTTGGAAATGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0272400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSGTERKYYLLGGKGGVGKTSCASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPE KAREEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQFLESPEYSMFTRIVFDTA PTGHTLRLLSLPDFLDASIGKILKLRQKIASATSAIKSVFGQEGTRQDAADKLEKLRERMIKVRDLFRDTDSTEFVIVTI PTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGV PALKFLGDIIWK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10803:SF17
1 332 332 5.7E-196 –
Gene3D
G3DSA:3.40.50.300
1 332 332 2.0E-89 –
PANTHER
PTHR10803
1 332 332 5.7E-196
IPR016300
SUPERFAMILY
SSF52540
2 300 299 2.58E-36
IPR027417
Pfam
PF02374
8 330 323 2.3E-71
IPR025723
TIGRFAM
TIGR00345
11 327 317 8.6E-73
IPR016300
CDD
cd02035
21 327 307 2.67559E-79 –
Coils
Coil
206 226 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016887
Molecular function ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0272400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…