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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0279300 |
| Transcript ID | LotjaGi5g1v0279300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59461500..59463221) extracted from Lotus japonicus Gifu genome v1.2.
ATAGAACATTAAGAGCAGAAAAATTAAGTACTAGAAAATATGGGGGATTCCTATTCCATCAAAGATGAGCAGGTTAAATT TTCCTCTAATCAAACAGAGGATGGTGCTTGCTTATCAGCACTGCTGCTCAGTACTAATATAGTATACCCTGCAGTTTTGA ATGCTGCTATTGAACTCAACTTGTTTGAGATCATAGCTAAAGCAACACCACCTGGTGCATTCATGTCACCTTCTGAAATT GCTTCTCAGATGCCATTGCCAACCCAACACCCAGACTTGCCTAACAGGCTTGAACGCATGCTGCGTTTGCTTGCAAGTTA CTCCGTTCTTACTTGTTCCACTCGCATCGCTGAACATGGTAGCACTGAGAGAGTTTATGGACTCTCACAAGTTGGAAAAT ACTTAGTCCCTGGTGCGAGTATGGGCTACTTGGCTTCATTTGTTTCATTTCTCTGCTATCCACCACTGTTACAGGTTTGG TAAGTGATTTGAGTCCCTAAACATATATATATATATATATATATATATATAATTATTTTTTTACCCCTTTAAAAAAAAAT CTTACCCTTGCTTCATTGTTCATAACTTGCAGGTTGAACTTAAAGGAAGCTGTTGTTGATGCTGATAGTGACCGGTTCAC GAAACGTCATGGAGTAACCATGTTCCAGTACATGGAAAAGGATCCAAAAATGAACCAAATTTTTAACAAGGCAATGGGCG ATCTGTGTGAAACAGAGATGAAAAGAATACTTGAAATCTATACTGGATTTGAGGGAATATCAACATTGGTTGATGTTGGA GGTGGGAATGGACAAAATCTCAAAATGATAATCTCCAAGTACCCTTTGATAAATGGAATTAATTTTGATCTGCCCCAGGT GATTGAAAATGCACCATTGATTCCAGGTATATATCCTGATATTTATCACTCATCAACATGTCAAATGATAGATATAAGCA TGCTTCTTACTTCTTCCTTTTCAGTGTTTTATTATTAATTAGTACTATGTATTTGTTAAGGGATTGAGCATGTTGGAGGT GATATGTTTGAAAGTGTTCCACAGGGTGATGCCATAATAATTAAGGTAAGTTTTTGCTACTTGATAGATTTAATTATTTG ACCTCATTAATCATAATGTGCTAAATCTAATCAGTATAGTTTTCTGACCTTGTTGGCGTGACTGTAGGCCGTAATCCACA ATTGGTCAGATGAAAAATGCGTACAAGTTTTAAGAAATTGTCACAAAGCATTGTCGCCAAAGGGGAAGGTGATTGTTGTG GAGTTAATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCCAACTTGTTTCTAGTCTTGACAATATCATGTTCATCAC AGCTGGTGGAATGGAAAGAACTGAGAAAGAATATGAGAATCTGTGCAAGCTCTCTGGATTTTCTAAATTTAATGTTGCTT GTCGCGCTTTCTCGAGTTTGGGAATGATGGAGTTTTATAAATAAGTTGATCAACATGTAGAATCTTAAAATAAAAGTATA AGAGCAGAGTGAGAATTAAGAGTATACAGGTCTAGTATTAAAGTTTTCGTTTATTTCTCTCGTGTGGGGTGCAATTGGGA TCCATGTTTATACCCGATGTAATGTTTATGACTTTTATGCACAATGGAATAATCTGACTTTCTTATAATCCCCTAAGAAC ACTGAAGTATTATATAGTTGCATCTAGTAATGCAATTGGGAG
CDS sequence (LotjaGi5g1v0279300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGATTCCTATTCCATCAAAGATGAGCAGGTTAAATTTTCCTCTAATCAAACAGAGGATGGTGCTTGCTTATCAGC ACTGCTGCTCAGTACTAATATAGTATACCCTGCAGTTTTGAATGCTGCTATTGAACTCAACTTGTTTGAGATCATAGCTA AAGCAACACCACCTGGTGCATTCATGTCACCTTCTGAAATTGCTTCTCAGATGCCATTGCCAACCCAACACCCAGACTTG CCTAACAGGCTTGAACGCATGCTGCGTTTGCTTGCAAGTTACTCCGTTCTTACTTGTTCCACTCGCATCGCTGAACATGG TAGCACTGAGAGAGTTTATGGACTCTCACAAGTTGGAAAATACTTAGTCCCTGGTGCGAGTATGGGCTACTTGGCTTCAT TTGTTTCATTTCTCTGCTATCCACCACTGTTACAGGTTTGGTTGAACTTAAAGGAAGCTGTTGTTGATGCTGATAGTGAC CGGTTCACGAAACGTCATGGAGTAACCATGTTCCAGTACATGGAAAAGGATCCAAAAATGAACCAAATTTTTAACAAGGC AATGGGCGATCTGTGTGAAACAGAGATGAAAAGAATACTTGAAATCTATACTGGATTTGAGGGAATATCAACATTGGTTG ATGTTGGAGGTGGGAATGGACAAAATCTCAAAATGATAATCTCCAAGTACCCTTTGATAAATGGAATTAATTTTGATCTG CCCCAGGTGATTGAAAATGCACCATTGATTCCAGGGATTGAGCATGTTGGAGGTGATATGTTTGAAAGTGTTCCACAGGG TGATGCCATAATAATTAAGGCCGTAATCCACAATTGGTCAGATGAAAAATGCGTACAAGTTTTAAGAAATTGTCACAAAG CATTGTCGCCAAAGGGGAAGGTGATTGTTGTGGAGTTAATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCCAACTT GTTTCTAGTCTTGACAATATCATGTTCATCACAGCTGGTGGAATGGAAAGAACTGAGAAAGAATATGAGAATCTGTGCAA GCTCTCTGGATTTTCTAAATTTAATGTTGCTTGTCGCGCTTTCTCGAGTTTGGGAATGATGGAGTTTTATAAATAA
Protein sequence (LotjaGi5g1v0279300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDSYSIKDEQVKFSSNQTEDGACLSALLLSTNIVYPAVLNAAIELNLFEIIAKATPPGAFMSPSEIASQMPLPTQHPDL PNRLERMLRLLASYSVLTCSTRIAEHGSTERVYGLSQVGKYLVPGASMGYLASFVSFLCYPPLLQVWLNLKEAVVDADSD RFTKRHGVTMFQYMEKDPKMNQIFNKAMGDLCETEMKRILEIYTGFEGISTLVDVGGGNGQNLKMIISKYPLINGINFDL PQVIENAPLIPGIEHVGGDMFESVPQGDAIIIKAVIHNWSDEKCVQVLRNCHKALSPKGKVIVVELILPEEPEPTEESQL VSSLDNIMFITAGGMERTEKEYENLCKLSGFSKFNVACRAFSSLGMMEFYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 122 | 119 | 4.9E-38 | ||
| PIRSF | 5 | 371 | 367 | 8.7E-129 | ||
| PANTHER | 12 | 371 | 360 | 1.9E-163 | – | |
| PANTHER | 12 | 371 | 360 | 1.9E-163 | – | |
| SUPERFAMILY | 21 | 125 | 105 | 9.8E-28 | ||
| ProSiteProfiles | 28 | 371 | 344 | 74.616 | ||
| Pfam | 39 | 92 | 54 | 9.4E-19 | ||
| Gene3D | 126 | 371 | 246 | 6.8E-77 | – | |
| SUPERFAMILY | 131 | 362 | 232 | 1.5E-54 | ||
| Pfam | 147 | 352 | 206 | 3.0E-64 | ||
| CDD | 211 | 304 | 94 | 9.53102E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0279300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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