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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0287400 |
| Transcript ID | LotjaGi5g1v0287400.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Choline/ethanolamine kinase; TAIR: AT1G71697.1 choline kinase 1; Swiss-Prot: sp|Q9M9H6|CK1_ARATH Probable choline kinase 1; TrEMBL-Plants: tr|I3SYS4|I3SYS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0287400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60426731..60432165) extracted from Lotus japonicus Gifu genome v1.2.
GGGTATCTTAGAGTAGAAGTTACCTAAATGTAAAATGTTCTCTTTCCAAATGAAAAAAATCTTTGTGGTCAACAAATAAG AAGTAAGCATTGTGAACGGCTAAGAATTTGAGTAATCAATGGCATACGTGTTCCCACTCTCTATATATACGTGTGCCAAA TGTCAGATTTCACACAACTTGAAGAAGAACATCAGTGTTTGTATCACCAAACCAATCTCTAACCACCTTGCTCTGCTTCT ATCCCCTGCTTCTCTGGTCAGTTCCCAACTCTTAGAATTCCACCTTTTTTTCTTTTTCATTTAGATCATTCTTCACGTAT TGTTGATTCTGATTCTCTTTAATCAACTGGGTTCTCAAAAAATATCTTTCTTTTTTACGCAATCTTCACTGCAGGGAAGT TACTTTCACACACTTTTTGTATCAACATTTCCCCTGTTTTTGAACCCTGTATTCCTCTGTTTCATATCATACGTGAGTAT CTAAAACACAAATTCTATTCTTTTTACCAATTAATTTATAAAGGGTCATCAATTTATTATATTTACTCTCAATTGGGTTT TCAAATATTGAATCTTTCTCCATTTGTTTATGCATGCACATACCCACTTAACTAAATACTCTGTTTCAGCTTCCTCTGTT TTCAGCTTCCTCTGTTTTCAGCCCAAAACAGAGCATCAGTTTCTGTTTATCATCATCAACTCATCATTCATTGAGGATGG CTGTTAAGACAATTGAATTGCTGAAAGGAAGTGCATCAATTGAAGAGATAATTGAGGTTCTGACAACAGTGGCTTCGGAT TTGGGGGATGATGTGGTCGATGATTTGAGCACTTTGCAGGTGATTCCATTGAAAGGTGCAATGACCAATGAGGTTTTCCA GGTAAATTGGCCAACAAAAAATGGTGATGATCTGAGAAAGGTGCTGGTTCGATTGTATGGCGATGGTGTTGAAATTTTCT TCGACAGGGAGGAAGAAATTCGAACCTTTGAGTGCGTTTCAGAACATGGTCAGGGGCCACGCCTTCTTGGTCGGTTCACC TGTGGCAGAGTAGAGGAGTTCATTCATGCTAGGGTATGTCATTATCTTCTTCTTTTGTTCTATAATATTTTTATTTATTA AATAACTTTATAGGTATGTTTCAGTAGAAAATTATCATTGATAGGTACTTAGCTAGGTAGATATATAATTGGAGTTGAAT TTCTTTTTGCCTGGTTTAAAATTGGGGTTGGCGTTGCAGTGTAAAATTGCGGATAAATTCAGGTTGATGCAGTCCTCTAA TTGCAATGCTGTTGCGGGTCTGACCACAATTGCACTTGCGGATTACAATTTGAAATTTTGACTTTGTCAACCCATCATGT TTTAAGGGTACAAGTTGAGAATATTACTATAAAATGTATTCCTCCATTCACATATTGACACATGTTTCATGTTTTATGAA TAGTTAGTTTTAGGCATCATATGAAAAATTTGGTTTTATATACATCATCACTGTCATGACTAAGATATTGTTGAAGAAGT CAACAAATATAAATTATTTATTAATTTTTATAATTACTTATTTAAAAGGACAGTATTTAATATATCAGTAGCAATAAAGG GAGATTATTAAAAATATTTATTACTCAGTCAATAGTAAAAAATAGTCAATTGACTAATGCTCTTATTTAATTTTTTGATC GTGACTAATGCTCTTAACTTATAATCCTGAATATTTGGGTGCATTTAATATTATTATTTAAAGAGTGAACCCCATTTTCT TGCCCAACTCATCAAATTAGTCCCAATACTAAGGAAAATACAAAAAAGCCCTCAACTTATTCTTGCCATTTATTTTCTTT CATTACAGTTTTTGAAACTGTGTTTTCTAATTTAAAAAACTGAAAATTTAAAACATGTTCGTTTTTAAAATATATCTTTC AAAATCATTTTCAATTTCAATTTCTAAAACTAAAATACTAGAATAATTAAAATATATTTTATGTTTCAATTTTTAGTTTT CAAATTACAATTTTTTAATGTTGAAAAAAATCTCATTCAAACAATTTTTTATTTATTAAAAACACTTTCTAAAAATAGTT TAACTATAGTTTTAAAAAACTGCAATCAAACGTTTACTTAATTCTTTGTGAATGACTAATGTGATTAACCAAAACAAAGA TAGATAAGTGTTGGTCTAGTGGTGAGTGTTGTCTACGTATCTGTAAGTGTGAGAACATAAGTTTGAATCATTTGTTGTGG TTGACTGCTACATCTCTCTACTGATTAAAGAAAAAACAACAACTTAACACGTGAGTAACTGTGGGTTTGAGTGTTAGATT GCCTTTATTAAGTTATGAATTAATTTGAGGATCATTATCCAGTTTGGAATAAATTTGGGTCATTATTTTCAAAGTGGGTT AAGGCTTGTTATTAGTAGGTTATCCTTTGAGAAATATGGAGGTCTGTGTAAGAACCAAATGCCAGTCACCCTTCACCATA AATTTAGTTTATATGAAAATAGAAAAATAGAACCCAGGACTAATTCAATTTATGTTTGAGCTTTGAGACTATATGCTCAG TTTGAAAGTTAAGTTACTTTATTCTTTAGTCAAGAGGAACTTTTCTTTTTGTCGTACTTTCTATTTTTCTTATTTTATTC CCTTTTGGAACAATGAAGGGTAACCAGTACTTGTTAGTTGTCATTAGGAATAACTAATAATTAAGAAGCATCTTTAAGAA ACTCAATTGAATGGTGTTGAGTCAATGGAACAGGATCAGGTGCTCTGCTCTTAGGTGCTTCTTTAACCATTCTTTTCCCC TAACTTCTTTCCTAAATATTATTTATTCCACTTAATAATAAAGAATTTTCAAAAAACTTAATAATAAAACAAATATACTA AGAACACCTTATTCAAAGGTCATCTGAGATTTTTTATTCATGCTCATGCATGGAAAGATCAGACTTGAGAGATCTTATTT CCTGACTATTTCAGTCATAATATTATGAAGGGGAAAAATATATTGAACAAATTTAAAGGTGAGCACCTAAGTATTGAGTT CTAATGGTGATTAAAATCAATGAAAATTTTGTTTCAGAATTTAAAATCAATTAAGGTTATGTTTCAGTCATCATAACTTG GTAGGCCTAATACCTCATCAGTATATCACTATGGGCTATGGTTTTCCTTGAGACCATCCACTCAGTGGTTTTATACTGTT AAATCTGTTCCTTTCTATCTGCTGTTGATGTTACTTTCTAATTTCCAATTGATTAAACTTTAAAATCAACTGAAGGAGTC TTAGAAAAACAAAAATGATGAATCTGGCATGGTCTTTTGCACTCCTAGTATAACAATTGTGCATAACAAGTTTTTATCTT TTTTTTTAGACTCTCTTGGCTGCTGACCTCCGCGACCCTGACATATCTGCTTTGATAGCATCTAAGATGAGAGAGTTCCA CAACCTTCATATGCCTGGTGCAAAGAAGGTTCAGATTTGGGAGAGAATGAGGTAAATATAAATCAAATCAATATTCAAAC CCATATTTGTCTCTATGCAGAATATTAAATGCTCTCCACATGTTATTTACTAGGAAGTGGCTTGGTGAAGCCAAAAGTTT GTGCTCCCCAAAGGATGCAACATTTTTTGGCTTGGAGAATCTGGATGAGGAAATAAATAGCCTTGAGAAGAAGTTATCTG AAGGATATCAAGAGATTGGTTTTTGTCACAATGACCTGCAATATGGTAACATAATGATGGATGAAGAGACAAGATCACTA ACTATAATTGTGAGTTGTGGCTGTAAATTATTTACCTCTGGTTTCCCCTGTTCCATATTTTTTGTTCCTGTTCTAATATT TTTAATGATGCAGGATTATGAATATGCGAGTTACAATCCTATTGCATATGACCTGGCAAATCATTTCTGTGAAATGGTGG CTGATTACCACAGTGACACACCTCATGTTCTTGACTACAGCAAATATCCTGGTAAAGTTTTGGTTTGTAATATTTTGATT GCTCGGTGAGATCTTTCTGCAATGCTAACACATCAATTTGCATATGTTAAAACAGGACTAGAGGAGCGTCAAAGGTTTAT CCGTATCTACCTGAGTTCTCAAGGTGAGTCCAGTGACCTGTCCACTCCTTATCTCTATTTATTGTTTCTATACTTTTAGC ATCTTTAAGCCAAAGCACAAGGAGACTTATATATGCAAAATGCCGAGACTAATTCTTTAACATAGAGCAAATTTTGCATA AGCACACTGTCTATAGGTACAAGTGATAAAAAGCTCAATGTATTTTCAAATTTAAAAAATAATCATTACTGATGTTGGTG TTATTGTATATTTTCTTGAACTTTTCATTAGTTGTATCTATAGACACTGATATCATACAAAAACTACTCCAGTCTGTGCT TTATGCGTAGCTTACATTCATTTGTTTTAATTTAAGCTTTAATTAATTAGATTACTTATCAAATTAGCTCATGAACTCTA CATTTTGAGTGTGATGTCTCATTCAGTCTTCAACTTCATGCCATGCTAATGTAGCTCTAAGAATCATTTCATGCAGGTCC AAAGTGATATGGCATACAGCCTGTCAAAACTCATAATCATGTTATTGAAGTTTAAATCATACCTAAATGCTTCTGAATCT CATATAATTGTTTCTCAAATTTATTTGTCAATTCCTTGTATACATGCAGGCAAGAAACCCAACAATGCTAAAGTGATCCA GTTAGTGAATGCTGCAGAAAAATACACGCTCGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATTTCTGTAAGTTTCT GGTTACTTTAAACAATGTTGTCACCTTGAAATTCTAGCTATGTATGCTCATATATATTTTTACATGTGATTGCAGAGTTA TGTCAATAAAATTGACTTTGATTACAAAGAGTATGCAAGACAGAGGTTTCAACAATACTGGTTGAGGAAGCCTACCTTAT TGGACACACAAAGCATCCAACTATGAATTGCTAATTTTTAACTATCAATAACATCTAAAGGCATGATGTCCAGCCAATAG TATATGTAAATAATATAATCACGAACTATGTGTGATGGGTTTTTGACAATTTTAACTAAATTTGCTTATCAATCCCTTTC TTTTGGGATTAAGTTGAGTGATTAAATTGAGAATCTGTAGTTATGTTTTTGTCCTTTCAGCTTTACACATTGAATGATGT CACATAATGTTTGAGGTTTTCTTCTTCTTTTCTTCCAACTTTTGCTTCAAAATTGTGTGCTAGTCAATCGCGGCAAATAG CGCCCCGCTATCGCGGCCGCTACGCTCCGCTCCGGGAGTGAAAACCCAACTTGCTATTAATAAACTTGCTATGTTATGTT ATTGGTAGAGATCAGAATGCAGAAACTTGCTATTAATAAATATGCTCTTCAATGTGGTTGACTTCTGATTAAGGT
CDS sequence (LotjaGi5g1v0287400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATACGTGTTCCCACTCTCTATATATACGTGTGCCAAATGTCAGATTTCACACAACTTGAAGAAGAACATCAGTGT TTGTATCACCAAACCAATCTCTAACCACCTTGCTCTGCTTCTATCCCCTGCTTCTCTGGGAAGTTACTTTCACACACTTT TTGTATCAACATTTCCCCTGTTTTTGAACCCTGTATTCCTCTGTTTCATATCATACCTTCCTCTGTTTTCAGCTTCCTCT GTTTTCAGCCCAAAACAGAGCATCAGTTTCTGTTTATCATCATCAACTCATCATTCATTGAGGATGGCTGTTAAGACAAT TGAATTGCTGAAAGGAAGTGCATCAATTGAAGAGATAATTGAGGTTCTGACAACAGTGGCTTCGGATTTGGGGGATGATG TGGTCGATGATTTGAGCACTTTGCAGGTGATTCCATTGAAAGGTGCAATGACCAATGAGGTTTTCCAGGTAAATTGGCCA ACAAAAAATGGTGATGATCTGAGAAAGGTGCTGGTTCGATTGTATGGCGATGGTGTTGAAATTTTCTTCGACAGGGAGGA AGAAATTCGAACCTTTGAGTGCGTTTCAGAACATGGTCAGGGGCCACGCCTTCTTGGTCGGTTCACCTGTGGCAGAGTAG AGGAGTTCATTCATGCTAGGACTCTCTTGGCTGCTGACCTCCGCGACCCTGACATATCTGCTTTGATAGCATCTAAGATG AGAGAGTTCCACAACCTTCATATGCCTGGTGCAAAGAAGGTTCAGATTTGGGAGAGAATGAGGAAGTGGCTTGGTGAAGC CAAAAGTTTGTGCTCCCCAAAGGATGCAACATTTTTTGGCTTGGAGAATCTGGATGAGGAAATAAATAGCCTTGAGAAGA AGTTATCTGAAGGATATCAAGAGATTGGTTTTTGTCACAATGACCTGCAATATGGTAACATAATGATGGATGAAGAGACA AGATCACTAACTATAATTGATTATGAATATGCGAGTTACAATCCTATTGCATATGACCTGGCAAATCATTTCTGTGAAAT GGTGGCTGATTACCACAGTGACACACCTCATGTTCTTGACTACAGCAAATATCCTGGACTAGAGGAGCGTCAAAGGTTTA TCCGTATCTACCTGAGTTCTCAAGGCAAGAAACCCAACAATGCTAAAGTGATCCAGTTAGTGAATGCTGCAGAAAAATAC ACGCTCGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATTTCTAGTTATGTCAATAAAATTGACTTTGATTACAAAGA GTATGCAAGACAGAGGTTTCAACAATACTGGTTGAGGAAGCCTACCTTATTGGACACACAAAGCATCCAACTATGA
Protein sequence (LotjaGi5g1v0287400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAYVFPLSIYTCAKCQISHNLKKNISVCITKPISNHLALLLSPASLGSYFHTLFVSTFPLFLNPVFLCFISYLPLFSASS VFSPKQSISFCLSSSTHHSLRMAVKTIELLKGSASIEEIIEVLTTVASDLGDDVVDDLSTLQVIPLKGAMTNEVFQVNWP TKNGDDLRKVLVRLYGDGVEIFFDREEEIRTFECVSEHGQGPRLLGRFTCGRVEEFIHARTLLAADLRDPDISALIASKM REFHNLHMPGAKKVQIWERMRKWLGEAKSLCSPKDATFFGLENLDEEINSLEKKLSEGYQEIGFCHNDLQYGNIMMDEET RSLTIIDYEYASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKVIQLVNAAEKY TLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDTQSIQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| Phobius | 49 | 75 | 27 | - | – | |
| Phobius | 76 | 451 | 376 | - | – | |
| PANTHER | 102 | 448 | 347 | 8.9E-189 | – | |
| PANTHER | 102 | 448 | 347 | 8.9E-189 | – | |
| SUPERFAMILY | 137 | 443 | 307 | 1.96E-93 | ||
| Gene3D | 139 | 216 | 78 | 3.2E-97 | – | |
| CDD | 141 | 439 | 299 | 4.42203E-130 | – | |
| Pfam | 168 | 368 | 201 | 1.5E-70 | – | |
| Gene3D | 176 | 440 | 265 | 3.2E-97 | – | |
| Coils | 281 | 301 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0287400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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