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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0288300 |
| Transcript ID | LotjaGi5g1v0288300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cyclin-dependent kinase; TAIR: AT1G54610.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610; TrEMBL-Plants: tr|G7IBV9|G7IBV9_MEDTR Cyclin-dependent kinase; Found in the gene: LotjaGi5g1v0288300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60504241..60509915) extracted from Lotus japonicus Gifu genome v1.2.
GAGGGTCCCTTGTACAAGTGCCACCATCATCTTTCAGCATTATGCGACTGTCTTGATTGGTGTACGAACAGCCCCTACCA CCATTGGATATTCACCTGCTCAGTTACCATTTACAGAACAATCTCCTTTCGTATTCTCAGAAAGATGCCAGCTGGTGGGA CCAAACTGAGGAATAATAATAAACCACGTGTGACTCTTTGTCTCTATCTCTGCGTCACTGTCTGTCCCTCTCTTCTTCTC TCTTTCAACTCAACCTTCAATTGCTTTCCATATGGTGCTATCTCTCACTCTCTGTCTCTCTCTCATTCATTCACTCACTG CGCCGTCATCTTCTCTCTCTCTCTGTGCGGAGAAATCCAGAGCTGAATCAAAACAAGGGTCCATTCATTGGTTGTGTTTC GTGTAATATACTACCAAACATTCCAAATGTGCCGGCCATGGTCGGCTTCTTTCATTCTTCTCTCTCTTCTCATCATCATT CCAAGTCATTTTCATTCTACCCTTCAAGTTGAAGCTGCAACAACAACTGTACAAGAGAGGAGAATTTGCTATGGGGTGTG TTCAGGCCAAGGCAATGGAAGAAGGTGGTGGTTCTGGCTACAGGGGTATTGACAGGTTGAAAATGGAAAGTGGGTATGTT GCAAGTTCTGATTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGATGAAGAACCCAGAAAGCAGAAAGCTGAGCC TGGTGCTGGCAATGGTGAAAGGAGAGAGCTTGCTGATGTGGGTGGTGTGGGGAAGAGAGATGCTGATGTGGGTCGTGGGA GTAAGAAGCTGCCAAATAAGTCTTTTGAGGATGAGATGGTTGATGGTTGGCCTAAATGGTTTGTTGAGAATGTTCCTGTA CAAGCGTTGGCTGGCTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTGGTCTTTGCTTCTCTGCTCTG TCTTAGTTTTATAATATGGATTAGGGAAGATGTAGGATGAGGGGGTTGTGAAATGTCAAAAGAATTTGGTTGTTCAATGC ATAGTGCATATGTGTTTAAGATGTTCTAAAACATTTTTCAATATGTGGCATCAGTCTTCAGCAATTTATGTTTCCTATCT TCTTGAATATAAGGAGTTCCAAAGTTATCTATATTTGCATTAAGATCATAAATTGAGGAAAGGTGATTCTAGTTTAGCAG CTTTTGTTTGCTAAGTAAGGTACAAGCAGACAATTCTGTTGTTCATTTAATGCATGATTGTTTTGACATGTTTGCAAAAT CTTCTACAATTGATTCTAAAGTCAAAATCAATTATGAGGAGAAACTTTTGTGAGTAGTTTCCGGGTTCCAGAATTGATTC TGAGCTGCTCCAAACATGCTAGTCACAAGTATTTACCAAGTTTAATTAAGGATCTGATAAGTTATTTTAGGAAAAATTCA GTCAATCATGGAATCATGATATTGATTTCTATCTAGAATAGAACAGTATTGTCTGGAATGATAGCCAAAACGACTTAAGT CTTTTGGTTTGGTTTGGTTTCTTAATCATTGACCATCTAATATGAAAGTTTGATGAAGTTCATTATTACTATGTGGTTTA TTTACAGAAAACCACCATTGAAAGGTTATCGTAATGGTTAATGGTAGAAGGGAGCAATTAAGGTGACTGAGCCTATGTTG TTTACATTCTGCAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGAGACAGGAGAAATTGTGGCC CTTAAGAAAGTCCGCTTCAATACATCAGAACCTGAAAGCATTAAATTCATGGCTAGAGAAATTATGATATTACAGAAATT GGATCATCCCAATGTAGTAAAACTCAAAGGCTTAGCCACTTCAAGAATGCATTACAGTATATATCTAGTTTTTGAGTTCA TGCCAACAGATTTGGCCAGAGTTATTACTCGGTCCGAAGAGAGACTAACTGAACCGCAGGTTAAACAATTCTCTATGATG CCTTGAACATTTTAGCATTTGGATCCCTTTGTTCTCCTTAGTAATCTTAAAAAGTCAATGTAGGTCAAGTGCTATATGCA TCAATTGCTTTCAGGTCTGCGCCATTGCCATGATAGGGGAATTCTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTG ATCAAAATGGGATGCTTAAGATCGCAGATTTCGGGCTTGCCAATCATTATGGTCCAAACCATGACCAGCCTCTCACAAAC CGGGTTGTGACTCTGTGGTACAGAGCTCCTGAGTTGTTGTTAGGTTCCACAGATTATGGAGTTGGTATAGATCTATGGAG TGCTGGATGTCTCTTGGCAGAAATGTTTAAAGGAGTTCCAATCATGCCTGGTAAAACAGAGGTGATAGTGCTAAGAAGAT AGCAGCCTTTTATATTTGAGTATTGCTGGCTATTTGTGAAATTGTGTTATGGTTGTCTGCATATCTTTTTGATATACTAA TCATGAAGTTTTCTTGCTTCCAGGTTGAGCAACTGCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGG AGAAAATTAAAACTTTCGACAACTTTTAGACCACCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCAGGGATCTCCC TCCATCTTCTTTAGGTCTCTTATGTACTCTTCTTGCTTTGGATCCTGCATTTCGGGGCAGTGCATCTAAAGCTCTTAACA ATCAGGTGAGTGAAGTTAAAAATGGCTATTCCCGACTAATGTGTGATTCTGATACTGAACCATTAAACACTGCATAACTT TTATCCATAAGATTGATTTTTTTTTTTCAAAATTCCATTTTTGGTCTATGAAACTGCAATTTTGCATGCCAAATGCTTAT TTTTGTGGATCCAAATTAATGGATACTTGTTACATAGTTTTTTAAGATCTTCTATCCAAAAGGTTTGATAAGGAATGACT AGGCGTAAGTTGTGAGATTTTTCTACTTCATGTAAATCTGGTCAAAAGGAAATCCTTGTTTGGCTTGATTTTACAAGAAC AATAATTAGATGTATAGCTTTTTCCACTTAAATGAAGCATACCCCACTTTCAGCATAATCAACAGAGCATTTTTAGAATA AATGCTTGTGTATTAATGGTCTAACAAATTTGTGTACTTTGATTTCACAAATCATTTTCATGGTGAAACCTACATCATAT ACATTTTATGTTCCTGTGAAGACCCAATATTGACTCATTTGCTGATAATGTAGCAAAGTGGATTTAGAAATTCAGACTCA AACATGTGCAACCATATTAAGTTCACTTGTAATTCCTGATGAACAACTAGGAAATGATTACACGCCTAAAGTATTCTACA TTTCACACATATGATAGAAGTATCTTTTTCCTGCAGTTTTTCTTTACAAGCCCCTTGGCATGTGATCTCTCTGGTCTTCC TGTGATCTCCAAACAAGAAGATGAGCATATTCGAGCCAATGAACAGATCAAGTAAGTCATCTTTAGCTATAAATGTATTA GGAATGGGTTCAGTCAGCTTGTGAACACAACTGCTCAGAGCATATGCATTATCATCGTACATGTCTAATAATGTGTGTGT CATTATTGGTCTATATCTTATTTTCTTAGTGAGAATTGTACATATGCGCACTGCATAGGCATACTCCTTGAACTTATGTT TTCATGTTATACTATGGATTTTTTTGTTGGCACTGATCCATTAACCCATATATATATTTTCTAGTTCGATGATTATATAA AAAAATTACTGATGAAAAGACTTCTAATTCAGCACTGACAAAGATATCTTATTGCTGTGCTGATGTGTACAGGTATATGA ACTCTAAAATCAGGCGTTCTCGCACATATATGGAGCGTCGCAAGAATTTAGCATCTAATAAGACAATAGAACATACTGTA TCATCTAAAGAGGTAGGTTTTAAAGGTTTTGCCTTAGAATTATACCTATGAGAAAGTGCCCTATAGTTAGATTCAAATTT TTGTTTGCCTACTTTGAGATAGAACCAAGCACTTCCCTGTTAAGTTTCCTTCTATTTGGTTTCCAACAGTTATGGTCGAC TTGTTTCACATTATGCTAGAGAAAGTGTCTGTTTAATACACCTTTTGTGGTTAACGTTTCCACTTTCAATTTGGTCCCCA CTTGTTACTGTGGTAACATTGTGCACATTTCAGGAGACCAAGTTATCAAATAAAGCTCGTGTTGTGTATCCAGGAGCACA ACACTAAATAGAAAGATAAATACATCAATTGTTTAAAATTAGAGCAAGTACTGTGTTAAATGTCTTCTTTATGTTGTTTT ATTATTTTAGTTATGTAAATGCGGCTGAACAACTAATTTGATGTATGGATCATTGGTTAAGTACATCGGTATTGCATACG CGTATTATTTCAGGAACAGCAATGTTATATGTTACGAAGGAAAATTGCAAGATGTGTCAATGCTAACTATGTTATTTGAC AGAATGACAGGGTAGAGGGTGATCACAACCACTTCTTCTGTTTCGTATGGTAACTCTTAGTATTTTCATTTCAGGATATC AGAAGAAATGATGAGCCTGAAACTTACGTTCCAAGTGAAGAACCAGGGAGCACAACAAGTAGTACCTCATCTAGTGCAAA CCCATCTGGGGCTAAGGATCACTCACCTTTATTTCCCCCTCTACTCCGGCCTTCAGATCAAAAGTTGCCCCCGAAAATCC ATCGCCATGCTTATGTTGGTGGGAAAAGCATCAAGAACCTTCCCCCATCATCCAAGTCAAAACCAAATGCAGCCAAGAAA GATGACAGCAGATACAGACCAGACCAGGTTTTCAGGTCTGCTTCCACCAGAGAATTTAGAAACTCAAAACGGGAACAGCA TTTACTCTTTGAAATTGATGATTAGGCAATCCTAGAATATGTAAACCAGCCTGTAATTTTTTTGAATAATTATTATTTGA TCTATTTTGAAAATTCCTCTACATATTCTTTGCCATGTTGGTGTAACTTGATTTATGGACCCATTCTCCTAAAGAAAAGA TTTCCTTCTGTTCCTATAAGCATCAACTCAAGTTGCATGCTTGTCCAAATTTCTTTGACTACCTTGTAAATGAACATATA TACTGTTTATATTACACATTTCTTAGGCATATCATAATGCATACTATTTAGTATTTACATAAAAGAACAATTCTTGGCAC ACACATTTATGTGCTATCACCTAAAGTCCTGCATATACAGCAGCATCAAATGTATCTGTGCTTTTATTCTGGTGAAGCAA AGTGTAAAGAGATGCTGATAACTGTGCATGTGTTGTGAGTAATTGGTGTAGCTTTATTGGTATTTAGGTTCCCAGTCAGG ACAATCCTACATTTATGAAGTTAAGAAATTTGAACCGTTTGATTATCAGTCGGGGCATATATTTTACCAAAAGATTGGAC GACAAAAATAAGCTTAAATTGTGAGACGATGAATCTTATTGAATGGTTCGAATTTTTCGACGGTGTAAATTTAGGAATTT AGTGTAGGGAATCCAAATTCGAACTTGAACTAAAATGTTGCTGCAAATTTTTTCTAGGGTTGTAAAATCTTTATGTAATC AGTTACTAAGTTACAAACATTGACCTTAAAAATAATGCAACTTGGAAGAATGAAGAAAGGAATGACTGTAACGTA
CDS sequence (LotjaGi5g1v0288300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGTGTTCAGGCCAAGGCAATGGAAGAAGGTGGTGGTTCTGGCTACAGGGGTATTGACAGGTTGAAAATGGAAAG TGGGTATGTTGCAAGTTCTGATTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGATGAAGAACCCAGAAAGCAGA AAGCTGAGCCTGGTGCTGGCAATGGTGAAAGGAGAGAGCTTGCTGATGTGGGTGGTGTGGGGAAGAGAGATGCTGATGTG GGTCGTGGGAGTAAGAAGCTGCCAAATAAGTCTTTTGAGGATGAGATGGTTGATGGTTGGCCTAAATGGTTTGTTGAGAA TGTTCCTGTACAAGCGTTGGCTGGCTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAAGGAA CCTACAGCAATGTTTATAAAGCTCTAGATCGAGAGACAGGAGAAATTGTGGCCCTTAAGAAAGTCCGCTTCAATACATCA GAACCTGAAAGCATTAAATTCATGGCTAGAGAAATTATGATATTACAGAAATTGGATCATCCCAATGTAGTAAAACTCAA AGGCTTAGCCACTTCAAGAATGCATTACAGTATATATCTAGTTTTTGAGTTCATGCCAACAGATTTGGCCAGAGTTATTA CTCGGTCCGAAGAGAGACTAACTGAACCGCAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCGCCATTGCCAT GATAGGGGAATTCTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATCAAAATGGGATGCTTAAGATCGCAGATTT CGGGCTTGCCAATCATTATGGTCCAAACCATGACCAGCCTCTCACAAACCGGGTTGTGACTCTGTGGTACAGAGCTCCTG AGTTGTTGTTAGGTTCCACAGATTATGGAGTTGGTATAGATCTATGGAGTGCTGGATGTCTCTTGGCAGAAATGTTTAAA GGAGTTCCAATCATGCCTGGTAAAACAGAGGTTGAGCAACTGCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGA GTATTGGAGAAAATTAAAACTTTCGACAACTTTTAGACCACCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCAGGG ATCTCCCTCCATCTTCTTTAGGTCTCTTATGTACTCTTCTTGCTTTGGATCCTGCATTTCGGGGCAGTGCATCTAAAGCT CTTAACAATCAGTTTTTCTTTACAAGCCCCTTGGCATGTGATCTCTCTGGTCTTCCTGTGATCTCCAAACAAGAAGATGA GCATATTCGAGCCAATGAACAGATCAAGTATATGAACTCTAAAATCAGGCGTTCTCGCACATATATGGAGCGTCGCAAGA ATTTAGCATCTAATAAGACAATAGAACATACTGTATCATCTAAAGAGGATATCAGAAGAAATGATGAGCCTGAAACTTAC GTTCCAAGTGAAGAACCAGGGAGCACAACAAGTAGTACCTCATCTAGTGCAAACCCATCTGGGGCTAAGGATCACTCACC TTTATTTCCCCCTCTACTCCGGCCTTCAGATCAAAAGTTGCCCCCGAAAATCCATCGCCATGCTTATGTTGGTGGGAAAA GCATCAAGAACCTTCCCCCATCATCCAAGTCAAAACCAAATGCAGCCAAGAAAGATGACAGCAGATACAGACCAGACCAG GTTTTCAGGTCTGCTTCCACCAGAGAATTTAGAAACTCAAAACGGGAACAGCATTTACTCTTTGAAATTGATGATTAG
Protein sequence (LotjaGi5g1v0288300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCVQAKAMEEGGGSGYRGIDRLKMESGYVASSDFVAHRRSTGQRHDEEPRKQKAEPGAGNGERRELADVGGVGKRDADV GRGSKKLPNKSFEDEMVDGWPKWFVENVPVQALAGLVPKSAESYKMIDKVGQGTYSNVYKALDRETGEIVALKKVRFNTS EPESIKFMAREIMILQKLDHPNVVKLKGLATSRMHYSIYLVFEFMPTDLARVITRSEERLTEPQVKCYMHQLLSGLRHCH DRGILHRDIKGSNLLIDQNGMLKIADFGLANHYGPNHDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFK GVPIMPGKTEVEQLHRIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVETFRDLPPSSLGLLCTLLALDPAFRGSASKA LNNQFFFTSPLACDLSGLPVISKQEDEHIRANEQIKYMNSKIRRSRTYMERRKNLASNKTIEHTVSSKEDIRRNDEPETY VPSEEPGSTTSSTSSSANPSGAKDHSPLFPPLLRPSDQKLPPKIHRHAYVGGKSIKNLPPSSKSKPNAAKKDDSRYRPDQ VFRSASTREFRNSKREQHLLFEIDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 4 | 569 | 566 | 1.2E-258 | – | |
| PANTHER | 4 | 569 | 566 | 1.2E-258 | – | |
| MobiDBLite | 34 | 90 | 57 | - | – | |
| MobiDBLite | 39 | 90 | 52 | - | – | |
| Gene3D | 114 | 206 | 93 | 1.1E-25 | – | |
| SUPERFAMILY | 119 | 410 | 292 | 2.56E-92 | ||
| SMART | 124 | 406 | 283 | 1.2E-91 | ||
| ProSiteProfiles | 124 | 406 | 283 | 45.107 | ||
| Pfam | 124 | 406 | 283 | 4.0E-68 | ||
| ProSitePatterns | 130 | 153 | 24 | - | ||
| Gene3D | 207 | 447 | 241 | 1.9E-63 | – | |
| ProSitePatterns | 244 | 256 | 13 | - | ||
| MobiDBLite | 453 | 571 | 119 | - | – | |
| MobiDBLite | 453 | 480 | 28 | - | – | |
| MobiDBLite | 483 | 502 | 20 | - | – | |
| MobiDBLite | 546 | 571 | 26 | - | – | |
| Coils | 583 | 585 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0288300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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