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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0295200 |
| Transcript ID | LotjaGi5g1v0295200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi5g1v0295200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61251974..61261212) extracted from Lotus japonicus Gifu genome v1.2.
AAGCATCATTGTGTATGCATTTCCTTTTCAACTTTACTTCCTTCTGTTGTTCTATTTCTCACATACCCACCATTATATTT CTTCACTTCTCAACACTGTCATTGCAGCATCTTCAACAAGCTTCGATTTCGCCATGGATAACCACCACAAGGGAACTCAA ACCAGCTCTTCTTCTTCTCCCATGAACTGGAAATATGACGTGTTTGTGAGCTTTCGTGGTGTGGATACACGAAACAACTT CACCGATCATCTTTTTGGTGCTCTCGAACGAAGAAGCTTTGTTACATTCAGGGATGACATCAAACTCAGAAAAGGAGAAA ATATATCCACTGAGCTTCTACAAGCAATTGAAGGATCCAATATTCTCATTGTGGTCTTCTCAAAAAACTATGCTTCCTCC ACTTGGTGTTTGCAAGAACTGGCAAAGATTGCGGATTGCATTGATGTGCCTGGCCAAACTGTCTTGCCTGTTTTCTATGA TGTGACTCCATCTGAGGTGCGAAAACAAACTGGGAATTACAGAAAAGCCTTTCTGAAGCATGAACAAAGATTCAAACAAC ATTTGCAGATGGTTCAATCATGGAGGGAAGATCTTGCACGTGTAGCAAATCTCTCTGGCTGGGATATCAGCAATAGGTAA GTATTCACTGAGATTTATATATCCTATATATATATATATGTGTTTACAGAAGCATTCTGCTTTATGTGTAATTATATATA TATATATATATATACACGTATAACTTACTCCAACTTGATTTTGTGAAGGAGTAAGTTAGCACTTAACACCTTTTCATTTG GACTAAAAATTCCAATTTTCTTTCTTCTTCAAGACAATAAAGTGGGGCTACCAATGTAATTTTGCTTACCAAACTTATTT AATTTTAAATCTCAAATTTTCTCTCTCCTCATTTATCACTTTCTTCAATCTTTCTTTGTCTTCAATCGGTGCCCATTTCT TTGCAACTGCAACTGATTGCCCCTTCTCAAATTTCTACCTCCAAAAACCAAACCCATTTTTATTTATTGGCAAAAGAAAA AGGCTCCTTCCTCTGCTGATTATTGTTTCTACAATTCGTTGATTTTGGAACTTGACATCGTTGGTTCCATGAGGAAAATT TAATCGAAGGCCAGGGGGGATTTCATCTGCCATTGCCCTCTGATTTGAAAATTTTGGGTTTTAGGAGCCCCTTTGTTTCT CAATCTAAGAAAACCACAGTAACAGATCTTGGCAAGGAAGGAAATAGAAAGATTGAATCTTTGGTAAATTTAAGTGATGG AGGTTAAAATCTTAAAATTGTGAAGGAAAGGAAGTGGCTGAACGTGAAAAGAAACAGAAAATTTAAGAAGAGAGATGGGT AGCTGGAGAGAGAAAATGGGTGGGAAGACAAAATTACCAAAACACCTAAATTTTGAATGTTTTTGAAGATTAAAAATGGG GATATTTTTGTCTAAAAGAAAAGGTGTTGGTTGCTAACTTACTCCTTCACAAAATCAAGTGGGAGTAAGTTAGCATTTCC CTATATATATATATATATAATATATATATATATATATGTATATATGTGTGTGTGTGTGTTTCCCATGTTTTCTTAATGAT GCTTTCTAATTGGAAAAAACTGTTTGCTAAGAGTGGCTTTCAAGTTTTGAGTTGGTGTTTTTGTCCTTAATCTTTTAGGC CACAGTATGGAGAGATTGGAAAAATTGTTAATGAGGTAACACGACTATTGGAACACAAACTTTCAACTCCACCAAGTGAT ATAGTTGGGATGCAGTCACGGGTGGAAGAGTTAGAAAAGCTTCTCCTTTTAGACTCACAGGATGATGTTCGAGTTGTAGG GATTTGTGGCATGGGAGGAATAGGGAAGTCAACACTTGCTACTAGTTTATATTGCAAAATCTCTGACAAATTTGATGCAT CATGTTTCATTGATGACATTAGTAAGCTTTTTGGAGACTTTGGTCCAATTGAGGCGCAAAAGCAAATTCTTAGTCAAACT TTAAACGAGGGAACTCTTCAGTTGTACAATCCTGTCATGACGACTAATTTGATGCGAACTAGGTTGCGCCACAAAAATGT CCTCATAGTACTTGATAATGTTGATGATGTGAAGCAGCTGGACAAATTGGCTATAAAACGTGAATGGCTAGGTGCAGGAA GTAGGATCATCATAATTTCTAGGGATGAGCATATCTTGATAGAGTATGATGTGGATAAAGTTTACAAAGTTGAACTATTG GATTCTGAAGATGCTCATCAATTGTTCTGTAGAAAGGCTTTTAAATGTAACTATATAATGAGAGACTACATGGAATTGAT AGGTGAAGTACTAACAATGCTAACGGCTTCCCATTAGCAATTAAAGTATTAGGCTCATTTTTGTTCGGGCGAGATGTTTC TGAATGGAGAAGTGCATTGGTTAGACTGAGAGAAAATCCAGAAAAAGATATTATGGATGTGCTTCGAATTAGTTATGATG CATTAAGGGATACAGAAAAGGAAATATTTTTAGATATTTCTTGTTTCTATCATGGAAAACCAAGTTTTAAGATGGAGCAT CTTCTAGATATTCGTGGATTTTATCCAAAAATTGGTTTAAAAGTTCTGGTTGAAAAATCACTAATCATAATAGACAAATA TAAGGTTATTAAAATGCATGACTTGTTGCAAGAGCTGGGAAGAAGTATTGTTCGAGAAGTATCACCAAAAGAACCAAGAA AGTGGAGCCGGCTATGGGACTATGATGATCTACACAATGTCACCTTACAAAATATGGTAGAATGGATTTTCAACGAAATC ATAGATAGATATTTTTCTAAAATCTATAACTTACAATGTTAAAAAATTTGTTCTTCTTCGCAATGTTTTAGGCAGCCGAA AATCTTGAAGCCATAATTATAAGAAGACGAAAACCAGAGTTTCCAGAAACCACGATGAAGGCTGATGCTTTGTCAAAAAT GAATCACCTTAAGTTGCTCATTCTTAAAGGTGTGAACTTTTCAGGAAGTCTCAATCATCTTTCCAGCGAATTGCAATATC TTTCTTGGAAAAAGTATCCTTTCCAATGTTTGCCACCAAGTTTTCGACCAGATAAACTTGTTGAATTGATCCTGCATAGT AGCATCCAACAACTATGGGAAGGCTCAAAGGTACTGTTAATTATTGCTTGTTTCTCTTCTTTCCTTTAATGATTAAATAA ATAGAAAAAGAAGCTATGTTATTTTTCCTTCTCTTTAAGTTGTTAAGAAACAAAAATGTCATTTTAATTTTGTTTCATCC TGTTGCCATTCTCTGCAGCCTCTACACAATTTGAGAGGAATGGATCTTTCTAACTCGAAGAATCTTATTAAGATGCCAGA ACTTAGGGATGCCCCAAATCTTGAGCGGCTAGATCTTGGAGGATGTATAAACCTCTTTCAGACCAATCAGATGTTAGAGA AACCAAAGGATGCAGAACACTTAGAGAGATTTGAAATGAATGAAAGTACCATCCAACAGCAGGCAACATCATCTCTCTAC AAAGTTCTGACATTGCCTTTTGAATTTATGTATTCTCGAAGACGTGAAGATTCGATTGGTTTATTGTTGCCTGATTTGCC TCATTTCTCATGTTTGCAACATCTTGACCTCAGCTTTTGTAATCTACGTCAGGTCCCTGATGCTATTGGGTGGTTACATT CTTTAGAAGACTTAGATTTGGGGGGAAACAATTTTATTTCACTGCCTCCTAGCATCAAAGAACTTTCCAAACTTAGAGTT TTGAACTTAGAGCACTGTAAGCAGTTGAGATATTTTCCTGAGCTCCCATCAAGAACCCAAGGATGGGTTGTTCGTAGACC TCACGCAGGATTGTATATTTTCAATTGTCCAAAATTGCGTGTGATAGAGCACTGTTATAACGTGGTTTTTTCTTGGATGA TCCAAATCCTTAAGGTTCCTACTCTCTATTTCTCTCTTACTTTCACGTGCAAGTAATTAAATGACAGTCTAATACAACTT ATTTTTCTGGTACCAGGTGCACATGCGATCCCCTTTCTGCAAGGGTCGTATTCAAGTTGTTATTCCTGGAGCTCAAATTC CAAGGTGGTTCAACAAACAAAATGTGGGCTATTCAATAAGCTTGGATCCATCTCCCTCTATTTGTAACCAAAATTGGATA GGTGTTGCTTGCTGTATAGAATTTGTGACGGGTGGCCCAATGAAATTCAATGATGAAAGGCTATTATATTTTAATGGAAC AAATGATTTTGATGGTGTGGAATTAAGCACCCACATTCATTGTTCCCAAGGTGAGGTGAGAAAATGCGGGTATCGCTGGG TATTTAAGGAAGATCTGGAACAGTTAAACCTACAAATGATGTATAGTGGAAATACATCAACTCGAAGGCACAAGTTCATA ACTGATGATTAGTTGTGCTATGTCATTAAGATGATTAACGAAAAGTGCAACTATTTCATTCGGTCACACTTCTTCAGAGA AATTAAAATCCATTTGGGGTAAGAGCTCAGTACTATATATTCATGTTATACATTTAGAATCATTTCTAGGCACTCTAAAT TGTATGTGAAAGGCTGATGATACAGTGATTTCTTTTCTCTTTTCTCTTTCCAGGCTAGAGTCAATTTCAACCGGGATTAT TGTGCAAGTTATGATTAGCATGTGGGGATGGCATGTCTTGAATGACTGTAACTAATTGTCAAATTTCAAAGGGGTAAAGG TACAAAATCAACTTGGATATAACTATCTTAGAGTAGATATTGCTATTAATATATCCATTGTAAATGGAGCTTTCACTTTG AGGTGGGAAGTCTTTGTAACATATTACTTCCCAATTCCCACCACCACTAATTTCAATGTATTACCATTTTGAATTTTGTT TCCTTTAATAAATATTTATGAAATTGATATTTGATAGAAAATGTGTCCAGTACTCCAGTTGTATTCAAGAATGGTTAAAC ACTGCAGAATTACAACATAATCTGTTGCTCAGTATCATTGTTATCTTAGACATGGACCACTATGGGCTGCTATAGTTTCA TTCTCACAAACATTATTGACAATTGGATAAGAATAAGGTGCCTTCCTATTTTGATATTGTCATTGGACTTGGTCATGCTC CCAAATCTATTGCTCAGTAAACTGTAAAAGTGGTTCAGATCAGAATGCAAGAGAGCCTTTCAATGGTGCTGTAATTCAAA CCAAACACCAGGTGGATGGATATCCAAGGTTCTGGGAGAAAAGAATAACTACATACACAAGAATCGCCATTACCCGTGTT AGCTTTCAGCAATCCTTTGTTGCAATTTCGATTGAATACAGGCACAATTGTAGCAAGTAACTATGGGACGTGCTTGTAGT GTCTTTCATTCCAGAAACTGTGGGCAATTAACGCCTGTAGTTGCTTTCCTCTGCACCAACTCAAACATCACAATTCAAGA ATCAACAGATTAACAGAACAATGTAGTTTCACTTCTTGAACATTGCTCACAAACTTATATATTGCAGATGATGAGATGAA AAATTTATGTCTCGTTGAAATTGAAAAGTTACTATAAACAAATGGAGGCCTTTAAAGGATTATCCATAATTGCCATGTCC AGCATATTCTGAAGTATTGCAATTTGAAAATAGATTTATTGTTAATTGGCTAAAACATGATTAAGGAGCCATGAAAAAAA AAAATAGTGTTGCTTAAATTGCGTAACCAACCCTGAATAGAATTGTGTGTATGAAAGGTTCATGAATTATGTCTTATCAG ATTTATGAGGCTTTTACTTCCTATATGGTGGAATGTGTAAGACTTTTGTTTGAAACACTCTACCCGTAGCACTTAAATCA AGTGGACTAATTGTTCCTAATGTTGAGTCAAGAGAGATAACGTCATTCCTCTTACTTGAAGACCAAATAGATTCATGCAA AAAAACCTTATCATATGAGATGATGCACCGGTGTTTAAAACCCAGTCACATTGATTCAATAAAGTCTTAAGGATGATTCA AACTTATTTAATACCATGTCAAATGGTTATATATTAGAGTCTCATCACAGACATTTCATGGATTTGTAAATCGAAAGGCT TTTATAGCCAACTTAAAAAGAATGATCAAAGGTAAACATAAAATTAATATACAGGGCCCAAAAACGTCTTCTGTATCATA CAAGAACAGAATCATCATAGATTTGATTCAATACAAAAGGTGTCCCCTAGGTTTATCCTATAGACCTATATGCTTAGGGT ATGCCCATAACCTAGAAACTGGCCCTTCTTCTTCTGAATCACTGTCACTGTCTGAGGAAGATGTTATGGATAGAGAATCA TTTAGAATATATTCAACAACCTGAAAATAGAATACCCATACAATGATTATCGGCTATTTAGTTCAGATACTGTCAATAAA TGATGCCAAGGAGGCATTCAACAATGCAATCTAGTGTGAACAAAAGTAGGCACACATCTTTAAATAACTGGAAATGTACA AATTTGAGGGAGAAGAAAACTAGGTTCCTAAAAAGCTCTAATACTCATCAAAATCATTACTAGGGTATAATTTTTGCAAA ACTAGGTTAATTACTTTGCAATATATCTTGTTCCCGAGCGAATGCAGACATTAATTCATATTGTTTTATCTAAGTAGAAT TCAGACTGCAAGCACACATAATTATATAAAAATGACTTGATTTTATTTCAGACTTCTTCCTATGATTAATATACAAGTTT GGTCTCCCAATAATTTTTTGTGCAGTTTTAATCCTTAACTTTTTTAATTACTACGATTAAATCCCCATGACAGTTTCCCT CTATTTAAAATCCTCAAATCTCTATATCTATTAATCATATATTATTTCTGAAGCACAAGCTTCTCCATTTGCACCGGCCA AAGGTTCGATCCTTGGACTAGATGTTTAAGGAGCCCAATTATCTACCAGTTGTTCTCCACTTTGTTGATTTTTCACTATC ATAATTGATAAATGGTCTTTATATAGTCTTTATTATTATTATGTGGTACTTCCCTTCTTCTTTTGAATTATACCCAGTGT AGTCAGAAGCGCGCTTTGAAGCGCTAAAGAGTGCTAAAGCGCGCTTGAGGCGGCTCTGGGCTTCAAAGCGTGACTAAGGC GGAATCGCTGAAGCGTGCAGAAGCGTGATTTTGAAGCTTCTGCCGCTTCAGCAAAGTTCGTCCTTTTCCGGGTTTATTTG GACCCGTTTGATCCGTTTTGCTAAAATTAGGGGTTTTTAACCTAATTTTCAATCAATTCTTCTTCTATCTTGAGCCTCTC TCTCTCTCGCCGGAAGCTTCTGCCTCTCTCTCTCGCGACTTTGCCTCTCTTTCGCCGTCGGCGCAGCCGCCGCTGCCGGC GACTCTGTCTCTCACAATTTGCAGGTTTGTTCGATCTTCTTCTTCTTCTTCTATTTCTTCCTTCCCTCTTCGACTCTGTC TCTCTCTGTTCTGTTGTTCGAGTTATCATCAATGGGTTTTGTTCTTCTTCTATTTCTTCCTCTTCGACTCTGTCTCTCTC TGTTCTGTTGTTCGAATGAGTTACTAAGAGCAATGGGCTTTGTCACTGTTCGAATGGGTTACTAAGAGCACCTCTCTCTG TTCTCTCTTTGTGAAACGGGTTTTGTTAATTTCCTTTCCTCTATTAGTTACTATCACTGTGCTTATTTTATGACTTATGT ATGAATTTTCAATTATGAGTTAGGGTACTTTATATTTTATGTATGATATTCTTAAGAGTTTTTGTCAATTATACCATTTA TATGCATATAAATATTAATAAGTGTAAATATATATATGTAACTGGCAAAAGCGGCTAAAGCCTACGCTTTAGCTAGCGCT TTACGCTTTTGGACCCTCCACGCTTTATTGCTAAATCCCGCTTCTGACTACCTTGATTATACCCAATTTCAATTTTTAGT GTCTATTTTTTTTTATAGGCAAATGTTATTTGTTAATAGTTAGTAAACTAGTTCATTCGCCTAGGTTTGAACTCAGGCCT TTCACCCTGCAAATCCCTTCATTTCCCTTAGCTCACCAAATGAGCTACCCTTCACCAAATTAGTAAATTAGCGTCTATTC TTTCACTATGTTAATGTTTCAAGTGACTTGTCAACCAACCCTCTTCTGATCCTTTCTACATCTTTATTCTTGCTATAACT CCATCATAACTACAATTTAATTTCGTATACTTTTATCCATAAAAATATTCGTAAGTTTAATACTAAATCGATTAAATTCT TTTAAATTCTCATTTGCTTAAAATTCACCGACTTATTTCACCTGGAAAAAAAATCCAACACTTCTCCCTTTTCAAACTCT AAACTCACTTCCTAATTCTTATATAAAATTTCAAATTTCATCATCAGGTTCTTTTAGCCTTTAAAATTGTTTATATAATA TCCCAAATCTATCATAAATTCCCAAATACTTGAGTGGAAAATGAGGATTGGTATACAAAAATTGACAAACACTTAAATGC AGCAATTAAAAAATTTGAAAGATTAAATTCTAGCAGAAAGTTTTACCAAACTAAAATCACACATTATCCATAGTAGAGGA TATACCTGTAATGTTGTCAGCTGCTTGACATTTTGATTTCTAGACATCCTCCCGCACCATACATTGGGGCATTTTGAGTT ATTTAGCCAAACTACAGTTTCACAGTGTTCACAGTATCCACGGTTGGTTGATAATTTCTTAGATAATGATCCTGTATCAA GTGAAGAGTTTACAAGTCTCATTACAATACTTTTATCCTTTTAATTGAAACCAAGTTAAATACAAATCCTTAATCCTTAG GTGTAAGAAATAACATTTAGCTTACCATTATAAGCTTTTTTAACAGCTTCTTTCCAGTCAGTAATGGTTGTACTATCTAT GGGCTCCGAGAAAAGCCTACTATTCCTGTTTTCAACCAGTCTAGTAGCCCGTTGTTTAGCAGCACCAAACAATACACCAT ATTGCAACTCCCACAAATGATTATCATTTGCTGCTACGCTCCACGACCTAGAAATGCAGTATTCACGAGTCGCAACTGAA GCAATATTGATAATGATACTGAACAAGGGATAAAATGAACAGACGGTACAATATATATAGACAATGATTATATAAAAGAA GTACAGTATTACCGGCAAACTAGCCCTGCTGACACCAAAGACTGCATATCCAGCGAACTGAAAATGTTTTCAAGAATATC TCGTGGCAGTTCGAATGACCCTGAAATATATGAAAAAGA
CDS sequence (LotjaGi5g1v0295200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAACCACCACAAGGGAACTCAAACCAGCTCTTCTTCTTCTCCCATGAACTGGAAATATGACGTGTTTGTGAGCTT TCGTGGTGTGGATACACGAAACAACTTCACCGATCATCTTTTTGGTGCTCTCGAACGAAGAAGCTTTGTTACATTCAGGG ATGACATCAAACTCAGAAAAGGAGAAAATATATCCACTGAGCTTCTACAAGCAATTGAAGGATCCAATATTCTCATTGTG GTCTTCTCAAAAAACTATGCTTCCTCCACTTGGTGTTTGCAAGAACTGGCAAAGATTGCGGATTGCATTGATGTGCCTGG CCAAACTGTCTTGCCTGTTTTCTATGATGTGACTCCATCTGAGGTGCGAAAACAAACTGGGAATTACAGAAAAGCCTTTC TGAAGCATGAACAAAGATTCAAACAACATTTGCAGATGGTTCAATCATGGAGGGAAGATCTTGCACGTGTAGCAAATCTC TCTGGCTGGGATATCAGCAATAGGAAGTCTCAATCATCTTTCCAGCGAATTGCAATATCTTTCTTGGAAAAAGTATCCTT TCCAATGTTTGCCACCAAGTTTTCGACCAGATAA
Protein sequence (LotjaGi5g1v0295200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNHHKGTQTSSSSSPMNWKYDVFVSFRGVDTRNNFTDHLFGALERRSFVTFRDDIKLRKGENISTELLQAIEGSNILIV VFSKNYASSTWCLQELAKIADCIDVPGQTVLPVFYDVTPSEVRKQTGNYRKAFLKHEQRFKQHLQMVQSWREDLARVANL SGWDISNRKSQSSFQRIAISFLEKVSFPMFATKFSTR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 178 | 169 | 1.4E-78 | – | |
| PANTHER | 10 | 178 | 169 | 1.4E-78 | – | |
| SUPERFAMILY | 11 | 163 | 153 | 6.28E-44 | ||
| Gene3D | 15 | 187 | 173 | 1.6E-64 | ||
| ProSiteProfiles | 19 | 160 | 142 | 29.935 | ||
| SMART | 20 | 160 | 141 | 3.0E-38 | ||
| Pfam | 20 | 169 | 150 | 1.1E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi5g1v0295200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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