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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0305100 |
Transcript ID | LotjaGi5g1v0305100.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT1G12580.1 phosphoenolpyruvate carboxylase-related kinase 1; Swiss-Prot: sp|Q6F3A6|CDPKA_ORYSJ Calcium-dependent protein kinase 10; TrEMBL-Plants: tr|G7IC06|G7IC06_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi5g1v0305100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62325237..62329530) extracted from Lotus japonicus Gifu genome v1.2.
TTGAACTACGGTAGATGCATGTCCATGAATAAATTGATAAAGTATTCTAGTGGTTTAGAAATAAATGCATTATTATTGTT CTTGAGAGACAGGGTTTCATTCATTCTGCGTTTGATTTTGAAAAGACAGAACACAACATGACAAACTAAGCAACGTTTCG GGTTTTGTTTGGTTCTCCGGGAGCTCAGCCACCACTCCTCCTCCAACGGTCTTCTCTGTTCTTCCTCTCCCCAGGTACCT CTCTCACCCCTTATTTCCAGCTCTATTTCTTTCGCCACCGGTGAAATTTGTTATGGGATCTGGGGTTGTTTAATATCAGC TGAATTTTGATGGGTTTGTGCTGTTTTCAGTTGTTTTCTTTGATTTATAGCTTCTAAATTATTTTTCCGGTGTTTGCTTT CGAGTTTTTGAAGGATCGTCCATGTCCCTATCAATAATTCTGGTCGAAAATCTTGGAAGTTTTTGTATAATTTCTTATAG GGATATGATACAATCAGTTTTCAGTCATTTTGTGAAATTTGAAGTAGTTGGGGAAGCTCAAATCTCTTATGATTAGCTTC TGATCTGACTCAGAAGTTACCACTCTGGGTTTTTATTTGCTACATGTTTTTGAAGTTTACCTGAATCAGCTATTATGCAG TGTGTAAAATGATATTCATTGTCATTGTTTTGCAGATCAGCTGATTTTGAAGGGGAGGGGGAGTGTTCTTAGGGCTCAAC TTCTTCTCTCCAATACTTCATGTTCATGGCATTCTGTTCCTTAGTCAATCTGCATCAAGCAAATTGAGCTTCTACAAGGG TTTTGACCTAAGCAGGGCTTTTGGTGGGTGACTGATTAAACTAGAAGATCAAGTTTCACACTTAAGTTATCTAATTGTGT CAAAGCGGTAGTCCCTATCTCTCTAAAAGATCTTTAAGCAAGAGAGTTCTCAGGGTAGTTTGCCTGTTATTGATATTTTT GGGTTTGTTGAGGGATAAGAAAATTGTTATGGCTGTTGCTGGCAACAGCAGTGGCGAACCTTCAACTTCATACACTTGTT ACAAAGAAGCAAGGTTGACTGAAACCATATTAGACACGAAACAAACTTCTAATTTAAAAGATCGGTATGTTCTTGGGGAG CAGCTGGGTTGGGGGCAGTTTGGTGTCATAAGAGTATGTTCTGACAAACTGACCGGAGAGGTCTTCGCGTGCAAATCAAT TGCTAAAGATAGGTTGGTTACTTCGGATGATATGCAGAGTGTTAAACTTGAGATTGAGATAATGGCCAAGTTATCCGGGC ACCCAAATGTTGTAGATCTCAAGGCTGTTTATGAAGAGGAACATCATGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGA GAGCTATTTCACCTGTTAGAGAAGCAAGGAAGGTTTTCTGAATATGAAGGCAAGATTCTCTTTAGGCATCTCATGCAGAT GGTTTCGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGTTACTAGATCCTCCT CATCTCCAATTAAACTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGTACTTCCTTTCTTTGATTCCTTTAATCT TCTTTGCAATTTCCATTTCTCCACTGAAAAATGACTGGTTTTGATCTTCAAATATTGGGTTTGTTTAAGCAGGACAGAGT TTGCATGGATTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTACTGAGAGGTGCATATAACCAGGCTGCTGATATTTG GAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGAAAGACAAAGTCACGAATTTTTGAAG CTGTCAAGGCTGCTGATTTGAGGTTCCCGTCTGAACCTTGGGATCACATTAGTGAATCTGCTAAGGATTTGATTAGGGGA ATGCTCTGCACAGAACCTTCTCTAAGGCTAACTGCTCAGGAGGTCTTGAGTAAGTTCACTCACTTCACTGTGTTTTTCTT TTGCTGTTAATGTGTATCTACTGAAGTCTGAAGCCATTTGATTCATATTTGCAACTGTTTCATGGAAAAAAGGAGTTGTT GAGACACTATAATGACAGATCATTTGAGATACCGATTATTACTTAATAACTGAACATCAAAAGTAATATTACTACACCAT TGGATACAAATAATGGTGTATTTTTTAAAAGACTCCTAGCAATATCTCTAGAGAACTCCTAGCAATATTTTTCATTTGTC AAATTTCCTTGTTTGACAGCCCTTTTATGCTCTATAACCTAATATTTGAGTGGTATATAAATAACACCTGTTGAATTAGC TATTACCCAGCTCTATAAGCTAATGGGTAAAGAGTGAAAAATACATGATGTGTTTGTGGAAAATGCACAGAATCACCTAC CTTGTGCTTAAATTCAATTTTATATTAGAATAATGGGGGGCAACAAGGATTGAAATCCAAACGGCTCTAGTCATAGAGAT TCTGATACCATGTCATAAACTAACTATCCAGAAGTTTAAGTTGTTGGTTGAAGAAATTTGAATGGTTTTATATTATATTT CTATTCAAGTTTATGTCATATGTTTAGCTGAACTTGGTGGCTTTATTGTTCTGGTTTTGAGCTCGTTCTTAGATGATCTT CAAAGCTATCATTTATGTTGGTTTAATTGTTACTGTAGCAATTGCTTAAATTAATCAGATGAAGATTCCTAATTCAATGA TTGGTTAATCCCTATGCATAACGAAGCACTGAAAAGAAATCAGGACCCAAAATTCTATTGTCTAATCTTTATTTGAACTT TCCCTTTGTAGACCATTGCTGGATGGAAAGCAATCAAACAAATACTGAACAACTAAGTGACTATAAAATTGAAAGTTGTG AAGAGTGGGATGTTGGTGGCAACTCATTCTCTGCCTCGTTTATGTCCAGGAAACAGGACATCAGCTTTGGTGCTGGCTCA CCTACATGTGATGCCCATTCACCTACATTCACATGCAAATCTTCATTTTCTTCCATTTTCGTGGAACCAGTGACGCCTTT CTCTGTTTCTGGTGGGTTTTCATTTCTGAGCTCAGGGGGTTCCATTGATTTGGAATTTTCTTCTCCTTTACCCTCAATGC CTAGCTTTGCATTTCTCAGCCCCAGGTCTGTTGTTGAGCAAGAGAATTGTATATTAGATGTCTCAACAAACACGTTAGAA GGAAATACAATTGCTGGAGGTTTGTATAGAATATTTCATGTAAACTGATATTTATTATTAGTATTTTTGTTTAGCTCTTT AATGTGATATATTATTGCTTCTACTACCAGATTCTCGCCTTTGCGTTGTACACAATGTCAAAGAAATGGGACTTGAGCCT GTAGAGGCTAAAAGGGTATGTGGAGCAAATGGTAATAGAGCATTGGGATTCCACAGCAAGAGAAACCGGACTATTGGACT TGGTGAGAGTGAGCAACTTGATCTTGGGGTGACTGAATCAGTTATCCGTTGGTTATCATGCACACAGCTTCCTACATCAC CAAGATCATCTCTTGTCTTTTGAAAATAGATTCCGGGACAGATGAAAGCTTGATCTGGTGCCTGAATTCGACGTACTGGT GAAAATTTTGCCTGCCTAACATATTGTACATGTTTCCTGAATTTTCATTATGGCTGATGGGAGTGGTTTAGATTTTGTGG TCGTTTGAAGATGGTGTGCAGTGCTCACTGTTGTTGTGTTTCTTTCATTTGCCGTCTCATGTTAGTTGTATTTTTATACT ACTTCAGTTATCTTGATGTAATTGAAATGCTTTGAAATGATTTGTAAATTAATGTGTTGAATTATACGTTGGTTCAATTG AGAGGAGTTGAAGGATGTTTTGTAAATGTACCAGAATTGACCTGACTATTTTATGCAGTAAACTATCACCATGCATAGGA GATGGATATGATGAACCATTCTCAAAAGAACTATGTGCATGCTGGTGTCACCTTGAATAATGAGTTATCTTCTTTTGACA AAAAAAAGTTATCTTCTTTTTGAATAACGGATGTCGTCACCTGTTATGAAATAATTGCATGTCTCTCCCAACAAAATGTC TTAAGTGATGTGTTTAGCTTGCGGCCGGACTTGTAGCAAACATCGCAAGCATTGCATAGTGTTTTGGCCCCATTAGTGAG TATTTAAAATGTCCGATAGTAAAATACCATGTTTGATAGTAAATACACTAAAATTTGAAAATAAATGATTTTTTAAACAT ATTCTTATACTTATTAAGGTAGCATGAAACGACGTTCTGTGCAACCGTATGAGT
CDS sequence (LotjaGi5g1v0305100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTGCTGGCAACAGCAGTGGCGAACCTTCAACTTCATACACTTGTTACAAAGAAGCAAGGTTGACTGAAACCAT ATTAGACACGAAACAAACTTCTAATTTAAAAGATCGGTATGTTCTTGGGGAGCAGCTGGGTTGGGGGCAGTTTGGTGTCA TAAGAGTATGTTCTGACAAACTGACCGGAGAGGTCTTCGCGTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTCGGAT GATATGCAGAGTGTTAAACTTGAGATTGAGATAATGGCCAAGTTATCCGGGCACCCAAATGTTGTAGATCTCAAGGCTGT TTATGAAGAGGAACATCATGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGAGAGCTATTTCACCTGTTAGAGAAGCAAG GAAGGTTTTCTGAATATGAAGGCAAGATTCTCTTTAGGCATCTCATGCAGATGGTTTCGTATTGTCATGAAAATGGGGTT GTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGTTACTAGATCCTCCTCATCTCCAATTAAACTGGCAGACTTTGG GCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGATTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTACTGA GAGGTGCATATAACCAGGCTGCTGATATTTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTT TGGGGAAAGACAAAGTCACGAATTTTTGAAGCTGTCAAGGCTGCTGATTTGAGGTTCCCGTCTGAACCTTGGGATCACAT TAGTGAATCTGCTAAGGATTTGATTAGGGGAATGCTCTGCACAGAACCTTCTCTAAGGCTAACTGCTCAGGAGGTCTTGA ACCATTGCTGGATGGAAAGCAATCAAACAAATACTGAACAACTAAGTGACTATAAAATTGAAAGTTGTGAAGAGTGGGAT GTTGGTGGCAACTCATTCTCTGCCTCGTTTATGTCCAGGAAACAGGACATCAGCTTTGGTGCTGGCTCACCTACATGTGA TGCCCATTCACCTACATTCACATGCAAATCTTCATTTTCTTCCATTTTCGTGGAACCAGTGACGCCTTTCTCTGTTTCTG GTGGGTTTTCATTTCTGAGCTCAGGGGGTTCCATTGATTTGGAATTTTCTTCTCCTTTACCCTCAATGCCTAGCTTTGCA TTTCTCAGCCCCAGGTCTGTTGTTGAGCAAGAGAATTGTATATTAGATGTCTCAACAAACACGTTAGAAGGAAATACAAT TGCTGGAGATTCTCGCCTTTGCGTTGTACACAATGTCAAAGAAATGGGACTTGAGCCTGTAGAGGCTAAAAGGGTATGTG GAGCAAATGGTAATAGAGCATTGGGATTCCACAGCAAGAGAAACCGGACTATTGGACTTGGTGAGAGTGAGCAACTTGAT CTTGGGGTGACTGAATCAGTTATCCGTTGGTTATCATGCACACAGCTTCCTACATCACCAAGATCATCTCTTGTCTTTTG A
Protein sequence (LotjaGi5g1v0305100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVAGNSSGEPSTSYTCYKEARLTETILDTKQTSNLKDRYVLGEQLGWGQFGVIRVCSDKLTGEVFACKSIAKDRLVTSD DMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEHHVHLVMELCAGGELFHLLEKQGRFSEYEGKILFRHLMQMVSYCHENGV VHRDLKPENILLVTRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLRGAYNQAADIWSAGVILYILLSGMPPF WGKTKSRIFEAVKAADLRFPSEPWDHISESAKDLIRGMLCTEPSLRLTAQEVLNHCWMESNQTNTEQLSDYKIESCEEWD VGGNSFSASFMSRKQDISFGAGSPTCDAHSPTFTCKSSFSSIFVEPVTPFSVSGGFSFLSSGGSIDLEFSSPLPSMPSFA FLSPRSVVEQENCILDVSTNTLEGNTIAGDSRLCVVHNVKEMGLEPVEAKRVCGANGNRALGFHSKRNRTIGLGESEQLD LGVTESVIRWLSCTQLPTSPRSSLVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 6 | 504 | 499 | 9.7E-238 | – | |
PANTHER | 6 | 504 | 499 | 9.7E-238 | – | |
SUPERFAMILY | 37 | 349 | 313 | 6.61E-88 | ||
CDD | 39 | 297 | 259 | 6.12695E-137 | – | |
Gene3D | 40 | 123 | 84 | 1.2E-104 | – | |
SMART | 40 | 298 | 259 | 3.4E-96 | ||
ProSiteProfiles | 40 | 298 | 259 | 50.251 | ||
Pfam | 40 | 298 | 259 | 3.1E-72 | ||
ProSitePatterns | 46 | 73 | 28 | - | ||
Gene3D | 124 | 304 | 181 | 1.2E-104 | – | |
ProSitePatterns | 160 | 172 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0305100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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