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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0305300 |
| Transcript ID | LotjaGi5g1v0305300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT3G03810.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|I1JYI9|I1JYI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0305300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62350332..62355805) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGTTCGTAACTAAGATTAAATGGGTTGTTCTTTCTGTGGTCACTTTATCTGTGGCTTCTATCATCATTCATCTGTC TTTGGCAAAGCTATGGACTGTTAACATGGTGCAGTATAGAGCAATGCCTGTTCTTCATGAAGATTTTGCTTCCACGTTGG GAAGACAGGTTGCTTTTTTGTTATATTTATACATGTATCCGCTGCTTGTGCGTGGCCAAGTGTTTTTTGTTTCACTTAAG TTATTTTGACTGTATTTGCTTGAAATGCTGCAGGGTGTAAGGAATAAAAAGCTGTGGGATTCCATAAAGTCTTTGGAGGG ATTGCAGCCAAACGCCAATGCAAGAAGCAATTATTCTGGTAAAATATTATCACTCATATTTCTTACCTCTCCATTCGGGT ATGACATAAAACACTACTTCAGTGTAAACAATTTGCATCTTATCATGTGCCTTTTGTTTTCACTTACATATGAGTAAGCT ACTTAATACAGCATATGCCCATTTACAATTGACAAGGAATCATCAATAAACCAGATTCTAGATTACGGAAATCTGTGCTC CATGATATCGTGGAGATCGTTAATATTTTAAATAGAAATGGCTTCATATTTCAAGAGATCTGTAAAATAAGATTTTGATT CTAATCTATTTTGAAGCATTCTTCATTTATGAGTGTAGCTTAAGTAGCAGAGCAATGATTTGTGGCATAACTTTGAGTTG ACTAATACTATCACTGTTTTCTCTAGTTTTTCTAAGAATGTAACTAATTGAGCTACTATTATTTGTGATTTTGATCTTTG ACAAATTTTAACAGAGAGCTGTTATACTCACCACAGTAACGACTATATATATTTCTTCATTTGGCATATTATACCTGTGT CATTTTAATCTTCTCCATCTTCCACTTCAAGTTTTGTGCTTCTTTTCTTGGCAGTTCCAAAAGAACAGAGTAATGGTTTC ATTTATGCCAAAGTTTATGGTGGGTTTGCAAATATAAGATCATCGGTAAGATCCATCAAATGTGTCAAAGTCTTAAAAAT CAATTTTTATTATTGTTTGTTATTTAACAATAGTGTTCTTGATTTTATAGATCTGTGATCTTGTTGCCATATCTAGGCTT TTGAATGCTACTCTTGTCATTCCAGAAATTCAAGAAAGTACTCGCTCAAAAGGAATTAGGTATGTGCTTCAACTTCTGTG CTCTATGCTATTAATATTTTCTTGCTGTGAAGCGTGAATAACATGTTTGTACAATTTTATTCAGCTCAAAGTTCAAGAGT TTTTCCTATCTTTATAATGAGGAGCAGTTCATAGCATATCTCAAAAATGATCTAATTATTACAAAGAGCCTGCCTGAAAG TTTGATAGAAAGAAGAAAAAGAAATGAGTTTCCTACATTTAAGCCCACAAGTTCAGCGTCTCCAAACTTCTATGTCAAAG AAGTCTTACCAAAGTTAAAGAAATCGAAGGTTGTTGGAATAATTATTGCCAGTGGTGGAGCTCTGCAGGTATTAAATTGT CAATTAACGTTTTTTTCCCTTTTTCAAATTGCAATCTGGTAGATGCTGTTGTATACTCCAGGTAGCGTCTGACTTCTGTT ATTTGTGTATAGCAAATATTATCCATATAGAAGAAAGTTCGTAAAATAGTTCATCTTTACTGAAAGTATTTAACTCTAGC AGGGTTATTAATCCTGGATAGCGGCGTGCAGTGGCCGATCCCAAAAACACTATGCATGATAGCAGATAACCGGGATGTCT GCTATTCTCAAATTTTTACAAAGATTAGATAATTTATACTATGTAAATATAAATGCTCAATTCCTCTTTTAAAAGAATAC TTAACACAAAAAAAGATAACCAAAAAAAAGAAGAGGGCAGAGAGAACAAGATAAACATGTGGGGAAAGTGAGATAAAAGT GAAAAGTAAAAGCACATGGTCATGGCCGAAAAAGTCACCAAAGAGAAATAGGTTGTGTAGTAATAGGCCGGAAAACTCAG ATCTGATGACATTGTGTAGGCTGTTTGGGAAACATCACATTGTGGTGGGAAAGTTGCCGATTTCCGGAATGAATCCCTCT TCTAACTATCCTTTCCTTTTACAAGAAAGGTGACTGACCCAAGGGAATTGCTTCATTTCTGTGCTTTGAACTTCTTAGAT ACTTGAATTACTATTCTTACAAGTTTTGTTTGTGAATATGAATTTCTGACTAACTTGCTAAGGTTAACTTGAGAACGATA TACACTTTTGCAGTCAGCACTCCCACCTACCATGGCGGAGATTCAGCGGCTAAGATGCAGGGTTGCTTTCCATGCCCTTC AATTTCGTCCAGAAATTCAAATGCTTGGCCATCGGATGATTCACAAGTATGAACTGCATTTTCTTTATTATCGCATAGAT TACTCCCTTGTTTTTTTGCACCGGCTCTTTTCCCTTGTCTTTAAAATCCATAATTCTGTGTGCTTCTGATATCCAATATA AGAAAACGAGAGTGTGGTTTATATTAGGACAGAAAAGAAGGGAAAATTGTGGAGTAGACAGAACATTATGGACTATGGAG TAGAGTTTGTTTTATGTTGCTGACCCCACTTAGTGGGAAAAGGCTTAGACGATGATGTAGAGAAGGGAAACTTAGTAAGT GAGACGCAGAGCAATTAGCTAGATAGATAATGGGAATTAGATTGCAAGGGTAGATGGAATAAAGGATCTTTGATAGGTTC CAGAAATTAACAACTAGAAAACTGAATGTATTATTGATGTAGAACCCTAATTCCCTAACTGCTCAATGTAGCCAGGACTT AGGAGAAATCCGTCTAAGAGATATAAGGTTGTTGGGACTTTTATGAGGCTCAACTCTCTCCCTGAACTTAATTCGATTTC CAGAACGATTCCCTCTTCTAACTAACCTTTCCTTTTATAAGAAAGGTAACTGTCCAGCTGTTATAACTTATAACTTCCCC TAACTAATTGACAGCTGGCACACTAACCCACTAACTGGCAAAAACCGTCTAACTGATTCAGCTCATTTACTAACAAGCTG ACTAATACAATGATATGTTAAGATCCTCCCTCCCCCATGTTCAGTCAAATAGTTAAGCTCAGACCCAGGCTCATTAGTTG GCCTAATATCTATTTCTATCAACCATTCAGATTTATTAGTAATGAGTAAACAGAGCCCCCATGGCTCTTCTGCAAGGAGA AACATTTGGAGGAGAGATCTTTCTCCTTGTTCTTTTCATTTTCAGTCAAGCAGTAAAATCAATCCTTTCTTTCTCTATTT TCAATGTGGGTTTGCCTTGAGTTTATATTGATTTTCTTTCTGGTGGTCTTGGAGTTGATGTGTAAGACATTTCTGCTGTG TATTTTTAAGGTTAAGAGGGTTGGGGCAACCGTTCCTAGTATACCATCCTGGCTTACTGAGAGAAACGTTGGCATACAAT GGTTGTGGAGAACTTTTTCAGGTTTGCGCTATTTTCCTCCTTTGTATCATCATTCCGTATTGTTAATGCCTCAATGGATC TGTTATTCTACTTCTACGGTGCATATATGTTTAAGCAGTATTTGTAACATTAGAATTTGATAATATTTGAGTTAATTCAA CTCCAACCATGTTTATCCTTTCCCTCACCCCCTTTCCTCCTTATATTTTTGTTCGATTACTTTATGAAGGTTTTGTTTTG TTAGGATGTACACACTGAACTCATCCAACATCGAAGGGCTGAAATGATAAAGGAAGGAATTCTTAAGGAGGAATTGAATG TGGATTCATACTTGCGAAGAGATAAAGGTCTATGTCCCATCATGCCTGAAGAGGTATGCTAAATTTCCCGATAGGGTATC CCGGTGGTGATGATGTGGTTCTTGTCCTATTTTTAGTTAAAATTGCTCTCACTCACTTCTGAAGGTTTTTTAAAAAATAA CCTTTTCCCCTAGAAGACAAGGACCTAAACAATCCTGATTCCATTTTACAGTATCCTGGATGGATACCCTGCTTGTATGA CAAGTCTTAGCATCTGTATATGGGGAATGATTTTACTAATAAATAGTCAATTTTTTTTTTCCACAGAAACTGTTGGTTTG GGTATAATTTCTTAATATTAGCAATAATTGTAAAATGTTAATGTCATTTGGGCCGTTCCAAAAAATAGGATACTCAATTT GTTAATAGTAGATGCTGCAAGTCACGGTTGAGGGGAGCCCATAAAATTATGATTATCACATAACTTTCTTTATAGTAAAC TGATAAAATGCCTAGTGAACTTGTCTAGTACATTGCAAGTAATTCAATCAAGTATATCTACTTTGAAATGCAGAGTTATG CTATTGTTTTTATGATTAACTTACTCAAAGAGTAAGTTGTGGATCTATCTATAAAAATGAATTCATTTACTTTGGAGTCA TTGGAAGAACTGTTAAAATTATTATAGCATTCTCTTAGCTGATTTTCAATTTTATGCATTGTGCATAGAAATATATGAGA TAAGGTGAGTTATCCTTATATGTGGTTTTTGTTGCAAAGCTACAAATAATATAATATAATATATGATTGAACTAAAATAT TTAAGTAACAGTCGAGTTGAAGTAGCCCTGTGGAGAGAGAAAAAAGTGATGATTGAAGGTTTCAGAAATAATAGTATTTA GTATACTAAATACTTTGTCTGAGTAAAATTGGGGATTAGAGTTATTTCAATCAAGAACTTTAGACCTTTCTTAAGATGCT AATGGCTCCCAGAATGAGAAGTGTATGTGGGATCTCAGCCTCTGCTGAGGCCAACCAATTTTACAATTAAAATATAATTT GGTCTTTTGGGAACACTGCTTCTATCTTTATGAATAAATACTGTTTTTCTTTTGGAAATTTGAAATTTTATTGTACAAAG GTTATATGTTGTTTTTTTATTGTTTCAACTTTGCAGGTTGGCATTCTCCTTCGAGTAATGGGTTATCCTTCCAAAACAAT CATATACCTGGCTGGCTCTGAAACATTTGGAGGTCAACGTGCTTTGATTCCTTTACGGTCCATGTTTATCAATACCCTGG ATCGCACTTCCTTGTGCAGTGACAAAGAGTTGTCTGACTTGTTTGGACCTGAAAGTCCTCTTCCGCAAAATAGTTCTTGG CCACCTCCTGCAAGAAGTGAGGCAGAACTTAAAGAAGAATGGAAGAGGGCTGGTCCTCGGCCTAGGCCTCTTCCTCCACC TCCAGATAGACCAATCTACCAGCATGAAAAAGAAGGCTGGTATGGTTGGATCACTGAGACCCCTACAGAGCCTGATCCTT CACCTATGGATTTGAGGATGAGAGCACACAGGTTACTTTGGGATGCGCTTGATTACATTGTTGCTCTGGAAGCAGATGCA TTCTTTCCTGGATTTAACAATGATGGTAGTGGATGGCCAGATTTTTCAAGCCTTGTCATGGGACATCGACTGTACGAGAC TGCTTCTTCTAGAACATATCGACCGGACAGGTAA
CDS sequence (LotjaGi5g1v0305300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTCGTAACTAAGATTAAATGGGTTGTTCTTTCTGTGGTCACTTTATCTGTGGCTTCTATCATCATTCATCTGTC TTTGGCAAAGCTATGGACTGTTAACATGGTGCAGTATAGAGCAATGCCTGTTCTTCATGAAGATTTTGCTTCCACGTTGG GAAGACAGGCAGTTCCAAAAGAACAGAGTAATGGTTTCATTTATGCCAAAGTTTATGGTGGGTTTGCAAATATAAGATCA TCGATCTGTGATCTTGTTGCCATATCTAGGCTTTTGAATGCTACTCTTGTCATTCCAGAAATTCAAGAAAGTACTCGCTC AAAAGGAATTAGGCAGTTCATAGCATATCTCAAAAATGATCTAATTATTACAAAGAGCCTGCCTGAAAGTTTGATAGAAA GAAGAAAAAGAAATGAGTTTCCTACATTTAAGCCCACAAGTTCAGCGTCTCCAAACTTCTATGTCAAAGAAGTCTTACCA AAGTTAAAGAAATCGAAGGTTGTTGGAATAATTATTGCCAGTGGTGGAGCTCTGCAGTCAGCACTCCCACCTACCATGGC GGAGATTCAGCGGCTAAGATGCAGGGTTGCTTTCCATGCCCTTCAATTTCGTCCAGAAATTCAAATGCTTGGCCATCGGA TGATTCACAAGTTAAGAGGGTTGGGGCAACCGTTCCTAGTATACCATCCTGGCTTACTGAGAGAAACGTTGGCATACAAT GGTTGTGGAGAACTTTTTCAGGATGTACACACTGAACTCATCCAACATCGAAGGGCTGAAATGATAAAGGAAGGAATTCT TAAGGAGGAATTGAATGTGGATTCATACTTGCGAAGAGATAAAGGTCTATGTCCCATCATGCCTGAAGAGGTTGGCATTC TCCTTCGAGTAATGGGTTATCCTTCCAAAACAATCATATACCTGGCTGGCTCTGAAACATTTGGAGGTCAACGTGCTTTG ATTCCTTTACGGTCCATGTTTATCAATACCCTGGATCGCACTTCCTTGTGCAGTGACAAAGAGTTGTCTGACTTGTTTGG ACCTGAAAGTCCTCTTCCGCAAAATAGTTCTTGGCCACCTCCTGCAAGAAGTGAGGCAGAACTTAAAGAAGAATGGAAGA GGGCTGGTCCTCGGCCTAGGCCTCTTCCTCCACCTCCAGATAGACCAATCTACCAGCATGAAAAAGAAGGCTGGTATGGT TGGATCACTGAGACCCCTACAGAGCCTGATCCTTCACCTATGGATTTGAGGATGAGAGCACACAGGTTACTTTGGGATGC GCTTGATTACATTGTTGCTCTGGAAGCAGATGCATTCTTTCCTGGATTTAACAATGATGGTAGTGGATGGCCAGATTTTT CAAGCCTTGTCATGGGACATCGACTGTACGAGACTGCTTCTTCTAGAACATATCGACCGGACAGGTAA
Protein sequence (LotjaGi5g1v0305300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFVTKIKWVVLSVVTLSVASIIIHLSLAKLWTVNMVQYRAMPVLHEDFASTLGRQAVPKEQSNGFIYAKVYGGFANIRS SICDLVAISRLLNATLVIPEIQESTRSKGIRQFIAYLKNDLIITKSLPESLIERRKRNEFPTFKPTSSASPNFYVKEVLP KLKKSKVVGIIIASGGALQSALPPTMAEIQRLRCRVAFHALQFRPEIQMLGHRMIHKLRGLGQPFLVYHPGLLRETLAYN GCGELFQDVHTELIQHRRAEMIKEGILKEELNVDSYLRRDKGLCPIMPEEVGILLRVMGYPSKTIIYLAGSETFGGQRAL IPLRSMFINTLDRTSLCSDKELSDLFGPESPLPQNSSWPPPARSEAELKEEWKRAGPRPRPLPPPPDRPIYQHEKEGWYG WITETPTEPDPSPMDLRMRAHRLLWDALDYIVALEADAFFPGFNNDGSGWPDFSSLVMGHRLYETASSRTYRPDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 29 | 8 | - | – | |
| PIRSF | 27 | 351 | 325 | 5.7E-65 | ||
| Phobius | 30 | 475 | 446 | - | – | |
| PANTHER | 55 | 475 | 421 | 4.8E-210 | – | |
| PANTHER | 55 | 475 | 421 | 4.8E-210 | – | |
| Pfam | 68 | 345 | 278 | 5.4E-33 | ||
| MobiDBLite | 345 | 390 | 46 | - | – | |
| PIRSF | 415 | 475 | 61 | 0.0048 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0305300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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