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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0306500 |
| Transcript ID | LotjaGi5g1v0306500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G04910.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A0S3SMT2|A0A0S3SMT2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62438430..62443805) extracted from Lotus japonicus Gifu genome v1.2.
GTTGGGTTTTATTCCATGTCTTATTATAGTTTGTTGGGTTTTTTAGAAATTAAGTAACCCATGGGCTCATTCACTAGCCC ATGGGCTAAGCAGGCAGAGGCAGGCCACAAGAAATGATGGTGCTAGTTTAATCCAAAGCCCATTCCGCGAAACCCAGTAA GAACTCATTTTCTGCTTTTATTTCCTTACCGGTGGTGACTTCGCTCCATCTTCTTTCTCCGTTCACCGCCACTTCCCCAC CGGCAACCGCCACTTCACAGATCTCCGCCACTCTCCGTCAGCCGCAACCGCCACTCCCTACTCCACACTGAACTATAAAC TCGAAGTACTAGATCCGCAGAAGAAGAAGAAGAAGAATCTCTAGAGCTATCGAATCATCTTCACTATGAGAAGGTAGGTA GAGTTTACATAACACCTTGATTTCGATTTTCAAACACTGACAATGTTATCGATCGCAATGCAGAGCTGGACTTCGCAGGC AGCATGGCACGCACGGCGGTTTCAAGGGGATGATTGTGAAGCTTTCAATTGCTGCTCTCGTTCTCTTGATCTGCACCCTC TCGTTCTTCTTCTCGTCAAGTGGAACCGCAAACGTTCAATCCAATTATCGCACCGAGGTTCGTTCAACGTTCCTAGTTCA AATCTCTGGACAATTTTCTGTGATTCGAAATCTGGTTTCAATTTTCATTTGTGGTTGAACAGATCCGTTTGGAAGAACTA TGGATCAATGCTGATTCCGGTGGTTGGCGACCGTCATCGGCACCGAGGACTCATTGGCCCCGTATCTATCTCTTCTTGTA GAATTGTAGTTACAGTCTGTTTCTGATGCAAGAGTTTTCAATTCAGTGTAGATTTTCAGTTCCACAACTTTCTGATGATT TGTTGTTTTCTTTGGTGTGTTTGTTCTCAGCTCCTCTAAGCAAGACCAATGGCTATTTGCGTGTTCGATGTAACGGTGGC CTAAATCAGCAGCGCAGCGCGGTTTGTACCTTTTCCCTCACACCGTAAACTGTGGTGGATTTTTGAGAGTATAGGGGTTT TTTTTGTTTTTATGCTTTGAATCTGTGCATTCATTCGAACTGCGAAGTATTTGCTTTATGTGTGCTTATGAAGCTGGGTG AATCTAGTGCTGTTGTTAAGATGGGGCTTCACTGTATGTATGTATGGTGGTATGGTGCTATTCTGTGTGTATTGATACAT CTGTATTTCAATGCTGTAGATATCTAATGCTGTTCTTGCTGCACGAATCATGAACGCTACACTAGTATTGCCTGAGTTGG ATGCAAACTCCTTTTGGCATGATGACAGGTAACTTGTCTTGAGATTTTAATTCTCAACTGACTTCTGAACTGCGGAAACC ATTTATCAAATTCTGGATTCGGAAAAAAATGGAAAAAGATGAAGAAGCTATTTCTTGAAAACATATGTCGATTGTTCAAT TTGAATGTGATTGTGAATCAATATTCAATGATTTACTTGAGAAAGTTATATTACTATATTTAGACTTAGGCATCTATGAA CATATTTAAGAAAAAAATTACTCTCTGTGTAATGAATGTGGTGACTTTTCTATTGATTTTATAAATTGAAAATGCTTTTA TATATCTTTATATATTATTATTGAAACTTGAATTCCTTATTAACTTGCGTTTTTAATTTAACTCTATCCTGTCTTGTTAG GGCATCTACTAACAAGACCCTTATTGGTATATTTGTTTTTATTTTACTGCAAGACGGAGAATGGGTAGTGTATTGATTTT CCCATGTAAATTTGAATGATAGTATCTGGTTAAGTTCTTATATATGTGATAGCAAGTTATCGTTGGAGTTCCTTCTTTCA GAACTATGTAAGGATGTCATCTCATTAGAAGTTAAGAACAGACTGAGTGCATTTTTCTGAGAAATGAATTGATATTGTTA CCTTATGTTTTCTACCTTTTCATCCTCTTAGCAGGGTATCAAAGTCTTGTAATTTTCTAAAAACCAGCATTGGTTGCATG CTTATTTATCAGCTGTATTATTGAGTTGGATGTTCATTAATTTTCTTTAAACTTCTCTCATAGAACACCGAAATGAGTTG GATCTATTTTTAGCAACCACAATCCACATACAGCATATTTCACATAAATTTCAGAGCAAGTTTCTAAAATTTACTTGTTT GTGTTTTGCACCCTTTGATAGTTAGAACTTTGAGTCTTATTCTGCTTTTAGAGAAGAGGCACCTGTAATGCATGTGTGAA GTTTTTTTTTGTATGTCACTTTTCTTTTATTTTTTAACTGTCTTATATAGTTGTTGTTTTTCAAAAGTTACTTAAAACTA GTAGTAATTGTAAGTGGTGGGCGGTTGTGGCCAATTTGCATGATCAGTTCTTCTCCTTTTTTGTTACAATAACAACATTA CAACAACCAAAGCCTTTTCGGACTAGGTATGGTTGGCTGCATGTATCAAATGACACCATAATGTCCTATCATAAATCATG TATATTGCAAGACCATTTAAATTCGAAACTTTCTTAATAGTTTGACCTATAATTTTCCTTAATCTCCCTCTCCATGTAAT TATTAGAGTATCCTCATTTGGTCTATCATCATTTGTTAAAACAAAACTTTGCAATTTTTAGAAACGTATAAAAGGAACAA TGGAGAACTCCCTTTGTATGATTGTACTGATTCTGGTTTAATTGTTTGTTAATTTGTGATGAACCAGTGCCACTCTACAC TATAATAAATCTTTTTTTATGCAGTGGTTTCCATGGTATCTATGATGTTGAGCACTTCATCAGGACATTGAGGTATGACG TAAATATTGTTGAAAGCATTCCGGAAAGTGAAAAAAATGGCAAAAAGAAGAAAATAAAGGCATTTCAGGTATCTTATTAG AATTTGGAAATTGACGAGAAGTTTGAAATTACTTCAATTTCCTGGATAACATGTTCAGATGTTATTTCGTCACAGATTCG GCCCCCTAGAGATGCTCCTATCAGTTGGTATACTACCGATGCTCTCAAGAAAATGAAGGAACACGGTGCCATCTATCTGA CTCCCTTCTCACATCGCTTAGCTGAAGAAATTGACATTCCTGAGTTCCAGAGGTTGAGGTGTAGAGTTAACTATCATGCT TTGAGATTCAAGCCACATATTATGAAGTTAAGTCAATCAATAGTTGATAAGCTACGTGCACAAGGGCCCTTCATGTCCAT ACATCTTCGATTTGAGATGGATATGTTGGCATTTGCTGGGTAAGTTATCTGGTTTGCATGCGTGTTTACATCAATTGAGA TATAGACATTGCATAAAAGAACCTAAGTCTAGCTTTCTGAAACGGTTGGCCTGATTTGTCATTCCAAAGCTGATGCCCAT CACCATGTTGCAACTAACACACAGGCCAGCATATAAAATACTGTTCCGATTGGATCATTTTCTTGGTTTTGACATACACC TGATCAATAGGTTATCAAAGCTAGGTTTTAAGTGTGTCCCAGTTGAAGAGTTGTGGTGCATTTATATGTGAAAGAAACTG ATTGGTTGCTTTTCCAGTGATCACTTCTAGTGCATTGCATATTTATTATTTATTAATTTTGCTTATTCATTAAATTCGTA GATATGCACCTGGGACACCTTCCTTTATCTCTTGAGTGCTTGACAGTTTTTGTATAAGCATGGAGTCATGTACTGCTGCA AGTGCTGCTCGTAGAGTAGAATCTGTTTTTTCGGTGGATAAATGAACTCAAATTTTTATTTAAATCATAACGGAATGCTT ATTTTCTAAATTCCGCTTGTTGAATTTGAATGTGGTTGTAGATGCTTTGATATATTTACGCCTGAGGAGCAAAAGATTCT GAAGCAGTATCGAAAAGAAAATTTTGCACCCAAAAGGCTTATCTATAATGAAAGAAGGGCCATTGGAAAGTGCCCATTGA CACCTGAGGAGGTAAAGGATAGTTTCTCCCTGGCTGTCTTTTATTTGTTTCTCAATGTTTGGCATAGGGCCTAACCTTTA CATGCGTGCTGGTGATCACAAATTTCAAATTTGTTGAAAATGAAAATTATGATATCAATGATTTAATTTGATGCACATTG ATGTGCTTTCATTGTAGGTTGGTCTTATTTTGCGCGCATTGGGTTTTGACAACTCTACCAGGATATATCTAGCAGCTGGT GAATTGTTTGGTGGGGATCGGTTTATGAACCCATTTCGAAGTTTGTTCCCTCGACTTGAGAATCATTCTTCTGTAGAACC CTCTGAAGAGCTTGCTGAGAACACTAGGGGATTGGCAGGTTCTGCTGTGGATTACATGGTCTGCCTTCTTTCTGACATTT TCATGCCAACATATGATGGCCCAAGCAACTTTGCAAACAACCTCCTCGGGCATCGCCTTTATTACGGCTTCCGGACCGTG ATCAGACCTGATAGAAAAGCTCTTGCTCCCATCTTCATTGATAGGGAGAATGGACGGGCGGCTGGTTTTGAGGAAGCTGT TAGGAAAGTCATGCTGACAACAAACTTTGGTGAACCTCATAAGCGTGTTAATCCAGAGTCTTTCTACACAAATTCTTGGC CTGAATGCTTCTGCAAAACATCTGCAGAGAACCCTGCAGACAAATGTCCACCAAATGATATTTTAAATACTATGGACAAC GAACTGGAGAAGGCTGCAACAGATGCAAATGCTACCATATCTTGAGCAGAAATAGAAGTTACTCGTGGCTTTGGGTTTAT GGTTCTTTCACTCTGCAGTGATGAATTGATGGGGGCCAAATTGAAAAGTAATGAGCTCCAAATGCCGGATCCAGATTTTC AGGTGATATTTTTGTCTCAAAATTTTGCCTACTGAGGGCATTCGTTAGTTTCGTGTATACAATAGAAGGAAGATCACACA GATTGAATGGAAAACCGGCAATGTGACTGGAGTTATCTTGTTTAGGGGAAAAGCTAACTGTAAAAGGGAACAGTCCTTCC ACTATATACTAGCGGGAGCATGGCACTTCTAGTTACCCGAAGAATGTTGGAAACTGGCAGATTTATGTTAGATACGTAGA GTACTGAACAGTAACAGGTGTGTTAAATTTATGATTTGTCTTATTAATATTTTTTTTGGGGGTTGGGGTAGGAAAGACGA TGTTCAAGTATTTCCACAAGTTTTTATTACCATGAGATCAAAGTTCACATTCTAATTATGTCAGACTCATAGTGGATAGT TTTTGGAAAATTCTTCAATAGATTGATGTCATTCAATATATTTTTTTTAAATGATGTCATTCAATGTTAGAAAAGTATAT AATCTGCTACTGTTTAATTGGACAACTTGATGGAAAGTAAACAAGAAATTTGTGGCTTGTATGATTCATTTCTCATTTTT TGGATTTATAAATGAG
CDS sequence (LotjaGi5g1v0306500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAGAGCTGGACTTCGCAGGCAGCATGGCACGCACGGCGGTTTCAAGGGGATGATTGTGAAGCTTTCAATTGCTGC TCTCGTTCTCTTGATCTGCACCCTCTCGTTCTTCTTCTCGTCAAGTGGAACCGCAAACGTTCAATCCAATTATCGCACCG AGATCCGTTTGGAAGAACTATGGATCAATGCTGATTCCGGTGGTTGGCGACCGTCATCGGCACCGAGGACTCATTGGCCC CCTCCTCTAAGCAAGACCAATGGCTATTTGCGTGTTCGATGTAACGGTGGCCTAAATCAGCAGCGCAGCGCGATATCTAA TGCTGTTCTTGCTGCACGAATCATGAACGCTACACTAGTATTGCCTGAGTTGGATGCAAACTCCTTTTGGCATGATGACA GTGGTTTCCATGGTATCTATGATGTTGAGCACTTCATCAGGACATTGAGGTATGACGTAAATATTGTTGAAAGCATTCCG GAAAGTGAAAAAAATGGCAAAAAGAAGAAAATAAAGGCATTTCAGATTCGGCCCCCTAGAGATGCTCCTATCAGTTGGTA TACTACCGATGCTCTCAAGAAAATGAAGGAACACGGTGCCATCTATCTGACTCCCTTCTCACATCGCTTAGCTGAAGAAA TTGACATTCCTGAGTTCCAGAGGTTGAGGTGTAGAGTTAACTATCATGCTTTGAGATTCAAGCCACATATTATGAAGTTA AGTCAATCAATAGTTGATAAGCTACGTGCACAAGGGCCCTTCATGTCCATACATCTTCGATTTGAGATGGATATGTTGGC ATTTGCTGGATGCTTTGATATATTTACGCCTGAGGAGCAAAAGATTCTGAAGCAGTATCGAAAAGAAAATTTTGCACCCA AAAGGCTTATCTATAATGAAAGAAGGGCCATTGGAAAGTGCCCATTGACACCTGAGGAGGTTGGTCTTATTTTGCGCGCA TTGGGTTTTGACAACTCTACCAGGATATATCTAGCAGCTGGTGAATTGTTTGGTGGGGATCGGTTTATGAACCCATTTCG AAGTTTGTTCCCTCGACTTGAGAATCATTCTTCTGTAGAACCCTCTGAAGAGCTTGCTGAGAACACTAGGGGATTGGCAG GTTCTGCTGTGGATTACATGGTCTGCCTTCTTTCTGACATTTTCATGCCAACATATGATGGCCCAAGCAACTTTGCAAAC AACCTCCTCGGGCATCGCCTTTATTACGGCTTCCGGACCGTGATCAGACCTGATAGAAAAGCTCTTGCTCCCATCTTCAT TGATAGGGAGAATGGACGGGCGGCTGGTTTTGAGGAAGCTGTTAGGAAAGTCATGCTGACAACAAACTTTGGTGAACCTC ATAAGCGTGTTAATCCAGAGTCTTTCTACACAAATTCTTGGCCTGAATGCTTCTGCAAAACATCTGCAGAGAACCCTGCA GACAAATGTCCACCAAATGATATTTTAAATACTATGGACAACGAACTGGAGAAGGCTGCAACAGATGCAAATGCTACCAT ATCTTGA
Protein sequence (LotjaGi5g1v0306500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRRAGLRRQHGTHGGFKGMIVKLSIAALVLLICTLSFFFSSSGTANVQSNYRTEIRLEELWINADSGGWRPSSAPRTHWP PPLSKTNGYLRVRCNGGLNQQRSAISNAVLAARIMNATLVLPELDANSFWHDDSGFHGIYDVEHFIRTLRYDVNIVESIP ESEKNGKKKKIKAFQIRPPRDAPISWYTTDALKKMKEHGAIYLTPFSHRLAEEIDIPEFQRLRCRVNYHALRFKPHIMKL SQSIVDKLRAQGPFMSIHLRFEMDMLAFAGCFDIFTPEEQKILKQYRKENFAPKRLIYNERRAIGKCPLTPEEVGLILRA LGFDNSTRIYLAAGELFGGDRFMNPFRSLFPRLENHSSVEPSEELAENTRGLAGSAVDYMVCLLSDIFMPTYDGPSNFAN NLLGHRLYYGFRTVIRPDRKALAPIFIDRENGRAAGFEEAVRKVMLTTNFGEPHKRVNPESFYTNSWPECFCKTSAENPA DKCPPNDILNTMDNELEKAATDANATIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PIRSF | 2 | 476 | 475 | 1.1E-154 | ||
| PANTHER | 20 | 489 | 470 | 1.4E-262 | – | |
| Phobius | 20 | 39 | 20 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| PANTHER | 20 | 489 | 470 | 1.4E-262 | – | |
| Phobius | 40 | 508 | 469 | - | – | |
| Pfam | 89 | 409 | 321 | 2.7E-63 | ||
| CDD | 89 | 412 | 324 | 3.35503E-151 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0306500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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