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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0306500 |
| Transcript ID | LotjaGi5g1v0306500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G04910.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A0S3SMT2|A0A0S3SMT2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62438885..62443114) extracted from Lotus japonicus Gifu genome v1.2.
CAATGCAGAGCTGGACTTCGCAGGCAGCATGGCACGCACGGCGGTTTCAAGGGGATGATTGTGAAGCTTTCAATTGCTGC TCTCGTTCTCTTGATCTGCACCCTCTCGTTCTTCTTCTCGTCAAGTGGAACCGCAAACGTTCAATCCAATTATCGCACCG AGGTTCGTTCAACGTTCCTAGTTCAAATCTCTGGACAATTTTCTGTGATTCGAAATCTGGTTTCAATTTTCATTTGTGGT TGAACAGATCCGTTTGGAAGAACTATGGATCAATGCTGATTCCGGTGGTTGGCGACCGTCATCGGCACCGAGGACTCATT GGCCCCGTATCTATCTCTTCTTGTAGAATTGTAGTTACAGTCTGTTTCTGATGCAAGAGTTTTCAATTCAGTGTAGATTT TCAGTTCCACAACTTTCTGATGATTTGTTGTTTTCTTTGGTGTGTTTGTTCTCAGCTCCTCTAAGCAAGACCAATGGCTA TTTGCGTGTTCGATGTAACGGTGGCCTAAATCAGCAGCGCAGCGCGGTTTGTACCTTTTCCCTCACACCGTAAACTGTGG TGGATTTTTGAGAGTATAGGGGTTTTTTTTGTTTTTATGCTTTGAATCTGTGCATTCATTCGAACTGCGAAGTATTTGCT TTATGTGTGCTTATGAAGCTGGGTGAATCTAGTGCTGTTGTTAAGATGGGGCTTCACTGTATGTATGTATGGTGGTATGG TGCTATTCTGTGTGTATTGATACATCTGTATTTCAATGCTGTAGATATCTAATGCTGTTCTTGCTGCACGAATCATGAAC GCTACACTAGTATTGCCTGAGTTGGATGCAAACTCCTTTTGGCATGATGACAGGTAACTTGTCTTGAGATTTTAATTCTC AACTGACTTCTGAACTGCGGAAACCATTTATCAAATTCTGGATTCGGAAAAAAATGGAAAAAGATGAAGAAGCTATTTCT TGAAAACATATGTCGATTGTTCAATTTGAATGTGATTGTGAATCAATATTCAATGATTTACTTGAGAAAGTTATATTACT ATATTTAGACTTAGGCATCTATGAACATATTTAAGAAAAAAATTACTCTCTGTGTAATGAATGTGGTGACTTTTCTATTG ATTTTATAAATTGAAAATGCTTTTATATATCTTTATATATTATTATTGAAACTTGAATTCCTTATTAACTTGCGTTTTTA ATTTAACTCTATCCTGTCTTGTTAGGGCATCTACTAACAAGACCCTTATTGGTATATTTGTTTTTATTTTACTGCAAGAC GGAGAATGGGTAGTGTATTGATTTTCCCATGTAAATTTGAATGATAGTATCTGGTTAAGTTCTTATATATGTGATAGCAA GTTATCGTTGGAGTTCCTTCTTTCAGAACTATGTAAGGATGTCATCTCATTAGAAGTTAAGAACAGACTGAGTGCATTTT TCTGAGAAATGAATTGATATTGTTACCTTATGTTTTCTACCTTTTCATCCTCTTAGCAGGGTATCAAAGTCTTGTAATTT TCTAAAAACCAGCATTGGTTGCATGCTTATTTATCAGCTGTATTATTGAGTTGGATGTTCATTAATTTTCTTTAAACTTC TCTCATAGAACACCGAAATGAGTTGGATCTATTTTTAGCAACCACAATCCACATACAGCATATTTCACATAAATTTCAGA GCAAGTTTCTAAAATTTACTTGTTTGTGTTTTGCACCCTTTGATAGTTAGAACTTTGAGTCTTATTCTGCTTTTAGAGAA GAGGCACCTGTAATGCATGTGTGAAGTTTTTTTTTGTATGTCACTTTTCTTTTATTTTTTAACTGTCTTATATAGTTGTT GTTTTTCAAAAGTTACTTAAAACTAGTAGTAATTGTAAGTGGTGGGCGGTTGTGGCCAATTTGCATGATCAGTTCTTCTC CTTTTTTGTTACAATAACAACATTACAACAACCAAAGCCTTTTCGGACTAGGTATGGTTGGCTGCATGTATCAAATGACA CCATAATGTCCTATCATAAATCATGTATATTGCAAGACCATTTAAATTCGAAACTTTCTTAATAGTTTGACCTATAATTT TCCTTAATCTCCCTCTCCATGTAATTATTAGAGTATCCTCATTTGGTCTATCATCATTTGTTAAAACAAAACTTTGCAAT TTTTAGAAACGTATAAAAGGAACAATGGAGAACTCCCTTTGTATGATTGTACTGATTCTGGTTTAATTGTTTGTTAATTT GTGATGAACCAGTGCCACTCTACACTATAATAAATCTTTTTTTATGCAGTGGTTTCCATGGTATCTATGATGTTGAGCAC TTCATCAGGACATTGAGGTATGACGTAAATATTGTTGAAAGCATTCCGGAAAGTGAAAAAAATGGCAAAAAGAAGAAAAT AAAGGCATTTCAGGTATCTTATTAGAATTTGGAAATTGACGAGAAGTTTGAAATTACTTCAATTTCCTGGATAACATGTT CAGATGTTATTTCGTCACAGATTCGGCCCCCTAGAGATGCTCCTATCAGTTGGTATACTACCGATGCTCTCAAGAAAATG AAGGAACACGGTGCCATCTATCTGACTCCCTTCTCACATCGCTTAGCTGAAGAAATTGACATTCCTGAGTTCCAGAGGTT GAGGTGTAGAGTTAACTATCATGCTTTGAGATTCAAGCCACATATTATGAAGTTAAGTCAATCAATAGTTGATAAGCTAC GTGCACAAGGGCCCTTCATGTCCATACATCTTCGATTTGAGATGGATATGTTGGCATTTGCTGGGTAAGTTATCTGGTTT GCATGCGTGTTTACATCAATTGAGATATAGACATTGCATAAAAGAACCTAAGTCTAGCTTTCTGAAACGGTTGGCCTGAT TTGTCATTCCAAAGCTGATGCCCATCACCATGTTGCAACTAACACACAGGCCAGCATATAAAATACTGTTCCGATTGGAT CATTTTCTTGGTTTTGACATACACCTGATCAATAGGTTATCAAAGCTAGGTTTTAAGTGTGTCCCAGTTGAAGAGTTGTG GTGCATTTATATGTGAAAGAAACTGATTGGTTGCTTTTCCAGTGATCACTTCTAGTGCATTGCATATTTATTATTTATTA ATTTTGCTTATTCATTAAATTCGTAGATATGCACCTGGGACACCTTCCTTTATCTCTTGAGTGCTTGACAGTTTTTGTAT AAGCATGGAGTCATGTACTGCTGCAAGTGCTGCTCGTAGAGTAGAATCTGTTTTTTCGGTGGATAAATGAACTCAAATTT TTATTTAAATCATAACGGAATGCTTATTTTCTAAATTCCGCTTGTTGAATTTGAATGTGGTTGTAGATGCTTTGATATAT TTACGCCTGAGGAGCAAAAGATTCTGAAGCAGTATCGAAAAGAAAATTTTGCACCCAAAAGGCTTATCTATAATGAAAGA AGGGCCATTGGAAAGTGCCCATTGACACCTGAGGAGGTAAAGGATAGTTTCTCCCTGGCTGTCTTTTATTTGTTTCTCAA TGTTTGGCATAGGGCCTAACCTTTACATGCGTGCTGGTGATCACAAATTTCAAATTTGTTGAAAATGAAAATTATGATAT CAATGATTTAATTTGATGCACATTGATGTGCTTTCATTGTAGGTTGGTCTTATTTTGCGCGCATTGGGTTTTGACAACTC TACCAGGATATATCTAGCAGCTGGTGAATTGTTTGGTGGGGATCGGTTTATGAACCCATTTCGAAGTTTGTTCCCTCGAC TTGAGAATCATTCTTCTGTAGAACCCTCTGAAGAGCTTGCTGAGAACACTAGGGGATTGGCAGGTTCTGCTGTGGATTAC ATGGTCTGCCTTCTTTCTGACATTTTCATGCCAACATATGATGGCCCAAGCAACTTTGCAAACAACCTCCTCGGGCATCG CCTTTATTACGGCTTCCGGACCGTGATCAGACCTGATAGAAAAGCTCTTGCTCCCATCTTCATTGATAGGGAGAATGGAC GGGCGGCTGGTTTTGAGGAAGCTGTTAGGAAAGTCATGCTGACAACAAACTTTGGTGAACCTCATAAGCGTGTTAATCCA GAGTCTTTCTACACAAATTCTTGGCCTGAATGCTTCTGCAAAACATCTGCAGAGAACCCTGCAGACAAATGTCCACCAAA TGATATTTTAAATACTATGGACAACGAACTGGAGAAGGCTGCAACAGATGCAAATGCTACCATATCTTGA
CDS sequence (LotjaGi5g1v0306500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGTGAAGCTTTCAATTGCTGCTCTCGTTCTCTTGATCTGCACCCTCTCGTTCTTCTTCTCGTCAAGTGGAACCGC AAACGTTCAATCCAATTATCGCACCGAGATCCGTTTGGAAGAACTATGGATCAATGCTGATTCCGGTGGTTGGCGACCGT CATCGGCACCGAGGACTCATTGGCCCCCTCCTCTAAGCAAGACCAATGGCTATTTGCGTGTTCGATGTAACGGTGGCCTA AATCAGCAGCGCAGCGCGATATCTAATGCTGTTCTTGCTGCACGAATCATGAACGCTACACTAGTATTGCCTGAGTTGGA TGCAAACTCCTTTTGGCATGATGACAGTGGTTTCCATGGTATCTATGATGTTGAGCACTTCATCAGGACATTGAGGTATG ACGTAAATATTGTTGAAAGCATTCCGGAAAGTGAAAAAAATGGCAAAAAGAAGAAAATAAAGGCATTTCAGATTCGGCCC CCTAGAGATGCTCCTATCAGTTGGTATACTACCGATGCTCTCAAGAAAATGAAGGAACACGGTGCCATCTATCTGACTCC CTTCTCACATCGCTTAGCTGAAGAAATTGACATTCCTGAGTTCCAGAGGTTGAGGTGTAGAGTTAACTATCATGCTTTGA GATTCAAGCCACATATTATGAAGTTAAGTCAATCAATAGTTGATAAGCTACGTGCACAAGGGCCCTTCATGTCCATACAT CTTCGATTTGAGATGGATATGTTGGCATTTGCTGGATGCTTTGATATATTTACGCCTGAGGAGCAAAAGATTCTGAAGCA GTATCGAAAAGAAAATTTTGCACCCAAAAGGCTTATCTATAATGAAAGAAGGGCCATTGGAAAGTGCCCATTGACACCTG AGGAGGTTGGTCTTATTTTGCGCGCATTGGGTTTTGACAACTCTACCAGGATATATCTAGCAGCTGGTGAATTGTTTGGT GGGGATCGGTTTATGAACCCATTTCGAAGTTTGTTCCCTCGACTTGAGAATCATTCTTCTGTAGAACCCTCTGAAGAGCT TGCTGAGAACACTAGGGGATTGGCAGGTTCTGCTGTGGATTACATGGTCTGCCTTCTTTCTGACATTTTCATGCCAACAT ATGATGGCCCAAGCAACTTTGCAAACAACCTCCTCGGGCATCGCCTTTATTACGGCTTCCGGACCGTGATCAGACCTGAT AGAAAAGCTCTTGCTCCCATCTTCATTGATAGGGAGAATGGACGGGCGGCTGGTTTTGAGGAAGCTGTTAGGAAAGTCAT GCTGACAACAAACTTTGGTGAACCTCATAAGCGTGTTAATCCAGAGTCTTTCTACACAAATTCTTGGCCTGAATGCTTCT GCAAAACATCTGCAGAGAACCCTGCAGACAAATGTCCACCAAATGATATTTTAAATACTATGGACAACGAACTGGAGAAG GCTGCAACAGATGCAAATGCTACCATATCTTGA
Protein sequence (LotjaGi5g1v0306500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVKLSIAALVLLICTLSFFFSSSGTANVQSNYRTEIRLEELWINADSGGWRPSSAPRTHWPPPLSKTNGYLRVRCNGGL NQQRSAISNAVLAARIMNATLVLPELDANSFWHDDSGFHGIYDVEHFIRTLRYDVNIVESIPESEKNGKKKKIKAFQIRP PRDAPISWYTTDALKKMKEHGAIYLTPFSHRLAEEIDIPEFQRLRCRVNYHALRFKPHIMKLSQSIVDKLRAQGPFMSIH LRFEMDMLAFAGCFDIFTPEEQKILKQYRKENFAPKRLIYNERRAIGKCPLTPEEVGLILRALGFDNSTRIYLAAGELFG GDRFMNPFRSLFPRLENHSSVEPSEELAENTRGLAGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTVIRPD RKALAPIFIDRENGRAAGFEEAVRKVMLTTNFGEPHKRVNPESFYTNSWPECFCKTSAENPADKCPPNDILNTMDNELEK AATDANATIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PIRSF | 1 | 458 | 458 | 3.2E-154 | ||
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| PANTHER | 3 | 471 | 469 | 2.2E-262 | – | |
| PANTHER | 3 | 471 | 469 | 2.2E-262 | – | |
| Phobius | 5 | 20 | 16 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 21 | 27 | 7 | - | – | |
| Phobius | 28 | 490 | 463 | - | – | |
| Pfam | 71 | 391 | 321 | 2.4E-63 | ||
| CDD | 71 | 394 | 324 | 1.8543E-151 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0306500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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