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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0307000 |
| Transcript ID | LotjaGi5g1v0307000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|K7LL59|K7LL59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62487679..62490139) extracted from Lotus japonicus Gifu genome v1.2.
TGAGTTTCCAACATTAACCTTCAGAGTCCTTGACTTCCAAGGCAGCCGTTTGTCGTCACCATAAGGCATTTTCTTTTCTT AGTTCTTGTTGTTTCTTTGCATTTGCCGAGTTATTTTTGAATCTTAATTTCCAGCAAATCTATTCTTCTTCAATTCTTCT TCCAACTTCTAGACTCCCCTTGACAACTTCTTACTAATTCATCTATTCTCCTTTAGGGAATTTAGATTCTGATCATTAGC ACCAATTCCTTCCACAAAGAAATGCATTTGAAATGTTTTTGTTGTTTTCAGAGTGAAGATGAGAAAACTCCACAAAGAAA GTATGTTTTCATCCAACTAATCCATTTATGTCCACAAATTTCTGGTTATAATTGTTATATATCAATCTTATACGTCTTTT AATTGATTTTCATTATTGTTTTTTTTTCTTAGCAATGTCAACAAGGTAAATAGGGACTATCCATGGGAAATATACACCTT GAAGGAGTTGCTGCGCGCAACAAACAACTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTTTATTGGG GTCGAACAAGTAAAGGCGTTGAGGCAATTATATAATTCATATATTCATTTTTCTTTTTGTTTGTCACTAACTTTAATCTA TGGGACATCATCTTACTGATGATCGATCATCTCTTCTCATTTCCTGTCTCACTAATTATGGAACTTGCAGATTGCGGTGA AGCGCTTGAAGACTATGACTGCTAAGGCAGAGATGGAGTTTGCAGTTGAGGTGGAAGTGCTTGGAAGAGTGAGGCATAAG AATTTGTTAGGATTGAGGGGATTCTATGCAGGAGGAGAAGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGCTT GCTTACCCATTTGCATGGTCAACTTGCTTCTGATTGTCTACTAGATTGGCCTAAAAGAATGAATATAGTAATTGGATCAG CTGAAGGGTTAGCGTAAGTACTCTACCTTCATCACCTCTCTCATTTTTACCAATCTCTCCAATGCTTATGGTTAAGAATT CCTTGCCAAAAACACAACACCAGAAATCAAATTGTTTAACTGTTCAATCCTGAAACCCTCTTGAATTTCAGGGACAGAAC TAGAAAAAGTAGGCAAAAGTGAAAATCTAATACTGATTATAAGATAGTATAAGAATTAACAAAGTCAAATACATTACAAC ATTTGATTATCGTTTTGTTTACTCTTGACTAAAACAAAATGGTTCAAAAATTAGAAGAGTTTCTAAATTAGAGTTTCAAA AATTAATTTTAACATACCAAGAGCATGTTATAAATAACATACACTAAATATTAGTTCTAACCCGTAAAGTAAAAAAAATG ATTCATGGCCTTACAAATCAATTTATTTTCTATGGAGGAGACAATTGCCCCATTTTAAATGTATTTGGTTCCATCTCTAC TTAAATGTTGTCAGCTAGATTTTTTTTTATTTATACCTAAGTTTTGGATCTATAATTCAATTTCTTCTGTTTGAAATATT CCTTTCATACATATGATTCAATATTAACACAAGTTGATCAACTAGTTGTACTTTGGCATTCTGTATTTTTGTAGGTATTT GCACCATGAGGCAAATCCTCACATCATTCACAGAGACATAAAAGCAAGCAATGTTCTTTTAGACAATGAATTTCAAGCCA AGGTTGCTGATTTTGGTTTTGCAAAGCTTATACCAGAGGGTGTGAGCCATCTCACCACAAGGGTTAAAGGCACACTCGGA TACTTAGCCCCAGAATACGCGATGTGGGGCAAAGTTTCCGAGAGCTGTGATGTTTTTAGCTTTGGGATTCTGCTTTTGGA GATTGTGAGTGCAAAGAAACCAATTGAGAAACTCCCGGGAGGAATCAAAAGGGACATTGTTCAATGGGTCACGCCGTATT TCCACAAGGGCGTGTTCAAACACATTGCGGATCCAAAGCTGAAGGGGAATTTTGATTTGGAGGAGTTGATATCTGTGATC ACGTTGGCTATGAGGTGCACGGATGGTAGCCCTGATAAGAGGCCTAGCATGGCTGAGGTGGTGGAATGGCTTAAGGGTGG TGGTGGTGGTGGTGGTGGGAAGAGAAAAAAAGAGATTCCCAATTTGAGTTACAAGAATGGTGACCAAGAAAATGAGGAAG ATCATGAAGAGATTGAAACAATGCAGTCCAAGTGGAAAACACAAAGTGATAATGACAGGGCTAGAATAAGATAATATTTT AGTGCGTGCTTGAGATTTATTATGCATCTTCCTGTTTATGAAAATAAGATGAAATTTTATTATATTTGTGAAGTTGTTAT GTATCTATCACTTTGGCCTTATGATCATCTTTAGTACTATATTTAATTTAATTTGTAGCTACCTTTATGTGACTCATTCA AATGAAATGTATATCTGCCAAATGTTCAGGTAACTTACAGTTCATTATTTTAAATTGTACA
CDS sequence (LotjaGi5g1v0307000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATTTGAAATGTTTTTGTTGTTTTCAGAGTGAAGATGAGAAAACTCCACAAAGAAACAATGTCAACAAGGTAAATAG GGACTATCCATGGGAAATATACACCTTGAAGGAGTTGCTGCGCGCAACAAACAACTTTCATCAAGATAACAAGATTGGAG AAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTTGAGATTGCGGTGAAGCGCTTGAAGACTATGACT GCTAAGGCAGAGATGGAGTTTGCAGTTGAGGTGGAAGTGCTTGGAAGAGTGAGGCATAAGAATTTGTTAGGATTGAGGGG ATTCTATGCAGGAGGAGAAGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGCTTGCTTACCCATTTGCATGGTC AACTTGCTTCTGATTGTCTACTAGATTGGCCTAAAAGAATGAATATAGTAATTGGATCAGCTGAAGGGTTAGCGTATTTG CACCATGAGGCAAATCCTCACATCATTCACAGAGACATAAAAGCAAGCAATGTTCTTTTAGACAATGAATTTCAAGCCAA GGTTGCTGATTTTGGTTTTGCAAAGCTTATACCAGAGGGTGTGAGCCATCTCACCACAAGGGTTAAAGGCACACTCGGAT ACTTAGCCCCAGAATACGCGATGTGGGGCAAAGTTTCCGAGAGCTGTGATGTTTTTAGCTTTGGGATTCTGCTTTTGGAG ATTGTGAGTGCAAAGAAACCAATTGAGAAACTCCCGGGAGGAATCAAAAGGGACATTGTTCAATGGGTCACGCCGTATTT CCACAAGGGCGTGTTCAAACACATTGCGGATCCAAAGCTGAAGGGGAATTTTGATTTGGAGGAGTTGATATCTGTGATCA CGTTGGCTATGAGGTGCACGGATGGTAGCCCTGATAAGAGGCCTAGCATGGCTGAGGTGGTGGAATGGCTTAAGGGTGGT GGTGGTGGTGGTGGTGGGAAGAGAAAAAAAGAGATTCCCAATTTGAGTTACAAGAATGGTGACCAAGAAAATGAGGAAGA TCATGAAGAGATTGAAACAATGCAGTCCAAGTGGAAAACACAAAGTGATAATGACAGGGCTAGAATAAGATAA
Protein sequence (LotjaGi5g1v0307000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHLKCFCCFQSEDEKTPQRNNVNKVNRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMT AKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLASDCLLDWPKRMNIVIGSAEGLAYL HHEANPHIIHRDIKASNVLLDNEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVFSFGILLLE IVSAKKPIEKLPGGIKRDIVQWVTPYFHKGVFKHIADPKLKGNFDLEELISVITLAMRCTDGSPDKRPSMAEVVEWLKGG GGGGGGKRKKEIPNLSYKNGDQENEEDHEEIETMQSKWKTQSDNDRARIR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 7 | 121 | 115 | 4.2E-30 | – | |
| PANTHER | 29 | 336 | 308 | 3.1E-126 | – | |
| SUPERFAMILY | 29 | 319 | 291 | 3.64E-78 | ||
| PANTHER | 29 | 336 | 308 | 3.1E-126 | – | |
| SMART | 46 | 317 | 272 | 6.5E-30 | ||
| Pfam | 46 | 315 | 270 | 9.0E-44 | ||
| ProSiteProfiles | 46 | 317 | 272 | 37.036 | ||
| ProSitePatterns | 52 | 74 | 23 | - | ||
| Gene3D | 122 | 320 | 199 | 1.7E-59 | – | |
| ProSitePatterns | 168 | 180 | 13 | - | ||
| MobiDBLite | 317 | 370 | 54 | - | – | |
| MobiDBLite | 331 | 370 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0307000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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