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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0313700 |
| Transcript ID | LotjaGi5g1v0313700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Imidazoleglycerol-phosphate dehydratase; TAIR: AT4G14910.1 HISTIDINE BIOSYNTHESIS 5B; Swiss-Prot: sp|Q43072|HIS7_PEA Imidazoleglycerol-phosphate dehydratase; TrEMBL-Plants: tr|I3T3H2|I3T3H2_LOTJA Imidazoleglycerol-phosphate dehydratase; Found in the gene: LotjaGi5g1v0313700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63201554..63208346) extracted from Lotus japonicus Gifu genome v1.2.
GTATTTTTTCACTCAAAAGTGAGATGTTACATGTATTTTGCACTACAAATCATGAATTAATTTCAGAATATAAGATTCCG AAATAATTCGGAACCCGAAAATCCGAAAATTGGGGGTGTGAAATCTAAAGGTTGGTTGGGGTGTCAAATCCCGCTCACTA AAATTACATAACATTTGTTCAGAAAACCTGTAATTTGATATTCGCAGTCTGAATGGAGCTAACTGCACCACCTCAGTGTC TTCTTCCAAAATGCCCTGCATCTCTGCGTCTGCAATCTAGGGTTTGCAATTTTCAGAGAACACCAAACCTAACATGCCCA CCTTCCAAAGCTTCAATCTTTTCACTCAAACCCCACAATCTCACCTCAATGAATCCTCCCAGACCCATCTCCACCGCTGC TTTGGTGGGTAACAACAGTTCTGCCACAACAGCTTTGCCAGTTGACTCAGGTCAACACAAACCTCAACTTCTCTTCTTCT TCTTCAGATGGTGATGTCAAAATTTAATTTTTTCTGATTCTCTGGGATTTTTCAGGTGCTAGGATTGGAGAGGTGAAAAG GGTCACCAATGAGACCAATGTGTCAGTGAAAATTAACTTGGATGGGTCTGGAGTTGCTGATAGTAGCACTGGAATTCCCT TCCTTGATCATATGCTTGATGTCAGTAATTTCAACTCAATTGGAATTCATTCTTGTTGTTGATGCTGATGCTTTACATGC TACTTTGCTTCTTTTAACTTTTTTTTTAATCTCATTGTTGCTATGTGCCTTAGAACTTAATATGAGGTTGCACATGTGTA TGAATGATCAAGAAGATAAATGATATAGGGGCCAAAAATAAATATTGAATAATTAACTAATTGAATCTGTTCTTAGTTTG ATTTTGTTTATTTTGAGTGTATTATGTATTATATTAATGCAAATTGACTTGGTGGAACTCTCAGGTAGTATTTTTCATTA AATATCTTATCTCATTATTTTGTTCTAATATTTTAACAGTTATATATGTGAAAGTTTTAGAAGTTATTGACACTTTACAC TGCTAGAAGTTGAGATTTTGATAAAAATTGTTCAGAAACTTTGCATAGCAAATTTTAACTTTGTTATAGGTGTGCACACA TTATAAATAAAAGGATTAGTTTGCATTTCTTGAACATGTGTGTGGTTCTATGAATTGATATGAACTGAAGACTGAAGAGA AAAAAGATGGGATTTAGACTTGTTTATAGTATAAAGTGTTGAGCATGTGTGTGTTTATAGTTTGCATATCTTTAATGTGT CTGCCGCTGCTCCCATTACAAGCCATCTAATATTGTGTTGAGCGATAGCTTCTATGATCCCTTTCTCGATGTCGTCCTTC TGAGATTAACAACTTTATACTTTATGCTTTTCAAACTATAAAATTTAGATTTAAGATACTTTATACTTTTCAAATTTATA GTATTTCTCTAGCAATTTAAGATACTTATCATTTTGTTTTACATATAAAAAAATAAAAATCTTAACAATTACATATAAAA AAATAAAAATCTTAACAATTTTTGTTTACATAATAATTTAGGGCACACGTTTAATTCGGAAAAAAAAAATTACAGTATTC TGTGCACTTGATGCTAGCTGATAGCTGAGTAAAGTACATTCAAAGTTAGAATGTGTACTATTCCATCAGCATTCTTGCTA TCTTAGAGTAATGAGCATGGGAATCTGCCATAAGAGATGTAAGGCTTGGTGGATGTGGGACGAATAAGGAACTTGTCTGC TAAACTCTCCTTGGAAATATCTGAATTGCTAAAATCTGATCATAGATGAGAAGTTTTTTATTTTCCTAATTTTTAACTTG AAAACTATATAATAAGGCTGCTAAGGATTTCAAATCATTCTATGGACGCAGTCACGGAATGATTAGCGAGACTAAACTCA GTTGTGACTTTTCAGCAACTTGCTTCACATGGACTGTTTGATGTACATGTAAAGGCTACTGGTGATATACATATTGATGA TCATCACACAAATGAAGATGTCGCTCTTGCTATTGGAACGGTACTGCCAACAGCTAAGTGAGCTGTTTCTTTCTTTCTGT TTTTCCTTTAAACTCGATCATGCTTCATTTATCTTACTTTGAAGAGATTACTTAAATATTGGTGTCTGTTAAACATGAAC ATGCTTCATCATCTGATCATCATGCACTGAAGATATTACTTAAAGATTGATTTGCAAAGTTATTCCTATTGTATTTCACT TTATCCGTTATATGCACAATGGCATCTAACTAATTGGTTGCATAACAAGTATAATATGGATTTTAATATTTGCTACAATG GGGATTTGTAATTATGCAACAACTAAGAGGTTTTTATTACTTCATCTTCAGGCTTTGTTGCAAGCTCTTGGTGATAGGAA AGGTATTAACCGGTTTGGTAACTTCTCAGCTCCACTCGATGAAGCTTTGATACACGTTTCACTGGTAATTTGCACAATGT TTGGAGAAATAATCATTAATTCTTTGGTTTAAGGTTTAAGTTAATATGTGTTGCTGTTTTGGGGGAAAAGTGTAATTTAT CCTTGCTTACGAATATGGTAAATGAATAAAGAAACTTTGACACAATGTTATGGCTTCTGTATCTGCATTTTAACATCATA CATTATCATGTTGATGAATGCATATCAACAAATCCTGGCAAATGTTATATAGGAGTACGGAGTACCAATGAGTTTGTGTT GAGGCTCATTGGTTAACTTAGTTGTGCTTGCACACAATGTTTCTGAATTTGAACTTGGAAGTTCTTGTGTCCATTCTGGT AATATTTATGAGCTTGTTTTTCCACTATAAAATTTGTAGATGCTTTACTGTTGCTTTTATCCCTTACCTTGTCCAGGATT TGTCTGGCCGACCACATCTAAGTTATGATTTGGACATACCGACTCAGAGGGTTGGGACATATGACACTCAGGTACTACAT GTCTGTTTAATTACTTCATCATTTACTCCAGAATCTTGTGCTTTTGACTATGGAGCTTCAAATTTTTCCAGCCCATATAT TTAATTATGCAAATCATTTATTATATTTCACAGTTTCACTTTTCCCTTCATTCTTGCTAATTACTGATAAACCCTCTGGA TATCCTCGTTTGCAGTTGGTGGAGCATTTCTTTCAGTCAATAGTGAATACATCTGGCATGACACTTCATATCCGGCAGGT ATTAATACATACAACCTTGGTCATTATCAGTAATAGTCGTTTGTGAGTGTATTTGTGCATATATAATTGTAAAAGGAACA CACTAAATGTTTTAGATGTTTTACCATGACTATTTGAAGTTTTCCAATTCCTTAGCCACGTGGCTTGTAAAATTGGGATG ATCTTTCTATTTGCTTCATGCATTGAGCACATGTTCCAACTTGAATTTTCTGGGGCTTATGCTTTTTCTAGCTGATGGCT TTATTTCAATTTTGAAAACCTTTTAACACAATATATATGCATTCCTTGAAACACAGCTCGCTGGAAAAAATTCCCATCAT ATTATTGAGGCAACCTTCAAAGCTTTTGCTAGGGCTCTTCGACAAGCAACAGAGCATGATCCACGTCGCCGTGGAACAGT ACCAAGGTCTGGTCTCTTCGAAACTGCTTCTTGTTCTTATACAAAGATGATGAGAATTAGATTTATTCCCTGGGTCACTC TGCTGCTAGTATTACTTAAAAACCATCTACTTTTTTTGTCCTTGTCTCTTGACAACAAGATTATCTCTGCTCTAGTATCA AAAGTTCAGTTTGTATCTTCAGAGGATAGAATAATCAATTTTACTTGTTGAAAGGTCACAGTTACCACTCCTTTATGAGA CGCTGATTGCAGTTTAATGTGTGTTGACTAGCAGAATGCTCTTTTTGAATATCTGCCATCATATTTAGTAATACTAGGTG TAATTTATTAGTTGACATATCAGGGTTTTGTTTGCTCATATGCTCTTGCATTCACATCTGCAATTTTTCTACAGAATCTA ATCTTACCCACCTTTTTTATGTGCAGTTCAAAAGGGGTTCTGTCACGTAGTTAATATCTTCAGCCGATATGCATGATTGG AGCTAATAATATGAGCGAACCTCCACAGTTCTTAAATTATATGCCTCCAAAATGACCCTGATAAATGCCAGTATTTGTCA TAAAGTTACTGGGCTCTAGTATTGTTGTGCATTTACTCTGGAAGTAAATTATTTTCCTGGTGATTTTATACGTACATTTA TTTTTGTAAAAATTTAGTGGGATTTACTTTGTTTTGTTGACAATGATTAGTCATGTCTCAGAATTATTATAGATTAATAA AAGGTTCAATTGCCCGTAAAAAAAAAGGTTCAATTGGATGGTTCGATCACATAATTTATTCAAATCGGTTCAGAACCAGT TTGGAATCGTTTTTATTTTTACCTAATTTTATGTGAGTTATCATTTTACTATATATACCATTAAAAATATGTTCAGCTGC TTTCACCAGTTCATTTTAAAATATTGCATAGAAAGGTCAATGCATAACCCGGGGGGCATTGGATTTAGAATTCACTGATG ACAGTAAATAGAATGAAATAAAACATAAGATGAAAAAGGCCCATGTCATCTTTTCTTGTATCATGGAGTCCATAAAGCAA GAGACTCAAGTTTTTTCTTATTGAGGTAAGGAGGGGGTAATAATCAAAACCTAAACTAGGTAAATAAAATTCTCATGAAA TAGTAAAAGTTAAATTCACTTCTTTTTTGTTTGATTTCTTTGCTACACAAGTTAAATACAATAATAAATTTGCTTACTCA CATACCATTGTTTCAGGGAATTTGAAATGGTACTATTGTTTCAACAACATAAAGAAAGGTGTCCTACAAAAATTCCTCAG CAGTATTTAGATAATCTAATATTTCAGTCTTCACTTCCTCCGGCAATGGGGCTGATGGCCCTGCCCTTGAGTAAAACTTT GCCAAAGATCTGATTGCTTTCTCCAACATATCATATGATTCCTGAAATGAACAAACCCAGTCATTATCAGAAAAAAAAAA AAAAAAAGGAACAAACACAGCATGATCATATATTGGTATGAATGTAATCTGCAACAAATGCTCACAAATATGCTATTTCA AACATTGAATTTCATTGCTTGAGAGTCTTAAAAGATTTCAGTTAAAAGTATATACTTCTTGAGCAACATCCTGATTTCCC CTCCAACCACCCAAATAATCCCGAATTGACTCCTTTGCTGCGTCTGCAGTTCTTCTAAACTTGGCATTGTCATCAGGGAC TTCATTTAACGATTCACGTAGCGTTTTCACTACTTCTCTTGCTGACTTCAAGTAAGCCTTTGGCAACACTTTCCCAGACT TTGATTTCTCATTAGGATCAAATAATGATTTGATGGCCCCAACAACTCCTTTATCATCATCCTCTTTGTCAGCTGAATTC TCTTCAGCAGATGCCATTAATGGTGATAAACCACCACAGGTCATGGTAACCAATGAAGTGCCAACACTGAGTAGAAGATG CCTGCGACTCGATGAAGCCTCCAAAGGAGGCAGTGCAATATTAGACCTGAATTGCAGTTTATCTGTTATATTGCAGAAGC AGTCAATAAATGGAGGACCTGCTGTTACTAAGCAAATCATGTTTGGATCAACTCCTCTTTCATTAGAATCAATTTTGAAA CTCAAAACCTACACATAGAAACTTCTCCCTAAAATTGATTAATGCCTTCAGAATCAATTGTAGAAATGTTTCCAAATATG GACTAAGCAGGCAATGCAATGACAGATTTCAGAGAATGCCTAGACAGTGCAATTATGTTGTCCCCCTCTCATATTATAGT GTTGCTATAATGCTATTGATTCTACTTTCTTTCCTTTTTTCTTTTAATTCTCTGATGCATTCTAAGTTCTAACCAGATTA AATCATTGTCTTTCTACAATCGATTTTAAAATCAATACTAGGGAGAAACTCCTATGAGTAGCTTTCGGAGGTCAGAACTG ATTCTGATGAAAGAGAAGTTGACGCAAACAAGCTAATAGAAGCAACAAATATACTATGAAAAATCGAAGTTGCAAATTAC TTTCTTAAGAGGAAAAACAGAATTGAAAAAAGAAAGGGAGGGAGCAAAAAGTGTTTCAAGTAGTTAGAACATACCATGAA TATCAAATCTTTTGATCCTTTCAACTGTTTTAGAACTTGTAATGGAACTCATATTTGCTGCAAGGATACTTGCCATTCTT CTTTATAAATTTCCACAATGCTGAGCTACATCCCCTGAGTACACAACACATAGCGGTAAGTCTCCTCACTCCTCAGTAAG TCTCTTCAGTGTTGCCATGACAATATTCATAGTTGGACACTAATACTTATACATGTACATATATCAGGGGGTTAAATCCA AATCGAAAATCCAGGAAGAAGTTGACAATACTACTTACTTCCAGTGGCTAAGTGCAGCAATGAACAGTTGAAAAATTCAG CCCCAAAATTCCCAAGTAAAATCACAAAATTTTCAGGTGTTTGTTGAACAAAAATGGTTGAACTTTGGGGGTAAAAATCT TAAGGGAATAATTGAAAACCACGTACAAGTAAATAAGTGCAACAACTGCATTTGGAAGCGTGTTTTTCTTCTCTTACCTG TGCAACTCCAAAGAATCTCTGCCTCAACGAACACTGCTCGCACCGCCACATAGGGGCTATCCAAAGGGAGAAGGCTAAAA TGGCCATTAGATTTGCATGTATCTAAAAAATACCCTTTACAACATTTTTACAAAATTTACCCAAATCTATTTT
CDS sequence (LotjaGi5g1v0313700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTAACTGCACCACCTCAGTGTCTTCTTCCAAAATGCCCTGCATCTCTGCGTCTGCAATCTAGGGTTTGCAATTT TCAGAGAACACCAAACCTAACATGCCCACCTTCCAAAGCTTCAATCTTTTCACTCAAACCCCACAATCTCACCTCAATGA ATCCTCCCAGACCCATCTCCACCGCTGCTTTGGTGGGTAACAACAGTTCTGCCACAACAGCTTTGCCAGTTGACTCAGGT GCTAGGATTGGAGAGGTGAAAAGGGTCACCAATGAGACCAATGTGTCAGTGAAAATTAACTTGGATGGGTCTGGAGTTGC TGATAGTAGCACTGGAATTCCCTTCCTTGATCATATGCTTGATCAACTTGCTTCACATGGACTGTTTGATGTACATGTAA AGGCTACTGGTGATATACATATTGATGATCATCACACAAATGAAGATGTCGCTCTTGCTATTGGAACGGCTTTGTTGCAA GCTCTTGGTGATAGGAAAGGTATTAACCGGTTTGGTAACTTCTCAGCTCCACTCGATGAAGCTTTGATACACGTTTCACT GGATTTGTCTGGCCGACCACATCTAAGTTATGATTTGGACATACCGACTCAGAGGGTTGGGACATATGACACTCAGTTGG TGGAGCATTTCTTTCAGTCAATAGTGAATACATCTGGCATGACACTTCATATCCGGCAGCTCGCTGGAAAAAATTCCCAT CATATTATTGAGGCAACCTTCAAAGCTTTTGCTAGGGCTCTTCGACAAGCAACAGAGCATGATCCACGTCGCCGTGGAAC AGTACCAAGTTCAAAAGGGGTTCTGTCACGTAGTTAA
Protein sequence (LotjaGi5g1v0313700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELTAPPQCLLPKCPASLRLQSRVCNFQRTPNLTCPPSKASIFSLKPHNLTSMNPPRPISTAALVGNNSSATTALPVDSG ARIGEVKRVTNETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQ ALGDRKGINRFGNFSAPLDEALIHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSIVNTSGMTLHIRQLAGKNSH HIIEATFKAFARALRQATEHDPRRRGTVPSSKGVLSRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 49 | 277 | 229 | 1.1E-141 | ||
| PANTHER | 49 | 277 | 229 | 1.1E-141 | – | |
| Gene3D | 77 | 169 | 93 | 1.7E-37 | ||
| Hamap | 82 | 275 | 194 | 41.951 | ||
| SUPERFAMILY | 82 | 166 | 85 | 7.33E-32 | ||
| CDD | 84 | 275 | 192 | 4.62358E-124 | ||
| Pfam | 111 | 254 | 144 | 8.9E-65 | ||
| ProSitePatterns | 141 | 154 | 14 | - | ||
| SUPERFAMILY | 167 | 259 | 93 | 3.67E-35 | ||
| Gene3D | 170 | 278 | 109 | 1.9E-42 | ||
| ProSitePatterns | 236 | 248 | 13 | - | ||
| MobiDBLite | 257 | 278 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Histidine biosynthetic process | The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. | ||
| Molecular function | Imidazoleglycerol-phosphate dehydratase activity | Catalysis of the reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H(2)O. |
Expression pattern of LotjaGi5g1v0313700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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