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GO:0000105

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Histidine biosynthetic process
Full defintion The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
Subterm of

Relationships

The relationship of GO:0000105 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCgo_curators

Associated Lotus transcripts 30

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0058939.1
– PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Glycine max] gi|356567431|ref|XP_003551923.1|
GO terms
4
Lj0g3v0058939.2
– PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Glycine max] gi|356567431|ref|XP_003551923.1|
GO terms
4
Lj1g3v0969950.1
– PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] gi|502078164|ref|XP_004485858.1|
GO terms
2
Lj1g3v0969950.2
– PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] gi|356548431|ref|XP_003542605.1|
GO terms
2
Lj1g3v3918060.1
– PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X2 [Cicer arietinum] gi|502106940|ref|XP_004493105.1|
GO terms
3
Lj2g3v0911700.1
– PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X2 [Cicer arietinum] gi|502106940|ref|XP_004493105.1|
GO terms
3
Lj2g3v2114150.1
– PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Glycine max] gi|356559575|ref|XP_003548074.1|
GO terms
2
Lj4g3v0014330.1
– PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Glycine max] gi|356567431|ref|XP_003551923.1|
GO terms
2
Lj4g3v0286210.1
– PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] gi|356524921|ref|XP_003531076.1|
GO terms
5
Lj4g3v2400820.1
– PREDICTED: ATP phosphoribosyltransferase-like [Cicer arietinum] gi|502076804|ref|XP_004485463.1|
GO terms
4
Lj5g3v2046060.1
– PREDICTED: imidazoleglycerol-phosphate dehydratase-like isoform X2 [Cicer arietinum] gi|502119750|ref|XP_004496726.1|
GO terms
2
Lj6g3v1629740.1
– PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] gi|356555910|ref|XP_003546272.1|
GO terms
5
LotjaGi1g1v0283900.1
– 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TAIR: AT2G36230.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|O82782|HIS3_ARATH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic; TrEMBL-Plants: tr|K7LZZ8|K7LZZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0283900
GO terms
2
LotjaGi1g1v0635100.1
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A072U2X9|A0A072U2X9_MEDTR Histidine biosynthesis hisIE protein; Found in the gene: LotjaGi1g1v0635100
GO terms
3
LotjaGi1g1v0635100.2
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A151T975|A0A151T975_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0635100
GO terms
3
LotjaGi1g1v0635100.3
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A072U2X9|A0A072U2X9_MEDTR Histidine biosynthesis hisIE protein; Found in the gene: LotjaGi1g1v0635100
GO terms
3
LotjaGi2g1v0231900.1
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A072U2X9|A0A072U2X9_MEDTR Histidine biosynthesis hisIE protein; Found in the gene: LotjaGi2g1v0231900
GO terms
3
LotjaGi2g1v0231900.2
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A151T975|A0A151T975_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0231900
GO terms
3
LotjaGi2g1v0231900.3
– Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A072U2X9|A0A072U2X9_MEDTR Histidine biosynthesis hisIE protein; Found in the gene: LotjaGi2g1v0231900
GO terms
3
LotjaGi2g1v0445800.1
– Histidinol-phosphate aminotransferase; TAIR: AT1G71920.2 HISTIDINE BIOSYNTHESIS 6B; Swiss-Prot: sp|B9DHD3|HIS6A_ARATH Histidinol-phosphate aminotransferase 1, chloroplastic; TrEMBL-Plants: tr|A0A151T4W1|A0A151T4W1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0445800
GO terms
2
LotjaGi2g1v0445800.2
– Histidinol-phosphate aminotransferase; TAIR: AT1G71920.2 HISTIDINE BIOSYNTHESIS 6B; Swiss-Prot: sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic; TrEMBL-Plants: tr|I1MNX6|I1MNX6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0445800
GO terms
2
LotjaGi2g1v0445800.3
– Histidinol-phosphate aminotransferase; TAIR: AT1G71920.2 HISTIDINE BIOSYNTHESIS 6B; Swiss-Prot: sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic; TrEMBL-Plants: tr|A0A151T4W1|A0A151T4W1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0445800
GO terms
2
LotjaGi2g1v0445800.4
– Histidinol-phosphate aminotransferase; TAIR: AT1G71920.2 HISTIDINE BIOSYNTHESIS 6B; Swiss-Prot: sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic; TrEMBL-Plants: tr|I1MNX6|I1MNX6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0445800
GO terms
2
LotjaGi4g1v0002000.1
– Imidazole glycerol phosphate synthase subunit HisF; TAIR: AT4G26900.1 HIS HF; Swiss-Prot: sp|Q9SZ30|HIS4_ARATH Imidazole glycerol phosphate synthase hisHF, chloroplastic; TrEMBL-Plants: tr|I1N0Y1|I1N0Y1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002000
GO terms
4
LotjaGi4g1v0002000.2
– Imidazole glycerol phosphate synthase subunit hisH; TAIR: AT4G26900.1 HIS HF; Swiss-Prot: sp|Q9SZ30|HIS4_ARATH Imidazole glycerol phosphate synthase hisHF, chloroplastic; TrEMBL-Plants: tr|A0A0L9TE25|A0A0L9TE25_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002000
GO terms
2
LotjaGi4g1v0026500.1
– Histidinol dehydrogenase; TAIR: AT5G63890.1 histidinol dehydrogenase; Swiss-Prot: sp|Q9C5U8|HIS8_ARATH Histidinol dehydrogenase, chloroplastic; TrEMBL-Plants: tr|A0A151S4E7|A0A151S4E7_CAJCA Histidinol dehydrogenase, chloroplastic; Found in the gene: LotjaGi4g1v0026500
GO terms
5
LotjaGi4g1v0352800.1
– ATP phosphoribosyltransferase; TAIR: AT1G09795.1 ATP phosphoribosyl transferase 2; Swiss-Prot: sp|Q8GSJ1|HIS1B_ARATH ATP phosphoribosyltransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A151T870|A0A151T870_CAJCA ATP phosphoribosyltransferase; Found in the gene: LotjaGi4g1v0352800
GO terms
4
LotjaGi4g1v0352800.2
– ATP phosphoribosyltransferase; TAIR: AT1G09795.1 ATP phosphoribosyl transferase 2; Swiss-Prot: sp|Q8GSJ1|HIS1B_ARATH ATP phosphoribosyltransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A067L1W5|A0A067L1W5_JATCU Uncharacterized protein; Found in the gene: LotjaGi4g1v0352800
GO terms
4
LotjaGi5g1v0313700.1
– Imidazoleglycerol-phosphate dehydratase; TAIR: AT4G14910.1 HISTIDINE BIOSYNTHESIS 5B; Swiss-Prot: sp|Q43072|HIS7_PEA Imidazoleglycerol-phosphate dehydratase; TrEMBL-Plants: tr|I3T3H2|I3T3H2_LOTJA Imidazoleglycerol-phosphate dehydratase; Found in the gene: LotjaGi5g1v0313700
GO terms
2
LotjaGi6g1v0269300.1
– Histidinol dehydrogenase; TAIR: AT5G63890.1 histidinol dehydrogenase; Swiss-Prot: sp|Q9C5U8|HIS8_ARATH Histidinol dehydrogenase, chloroplastic; TrEMBL-Plants: tr|I3SWQ6|I3SWQ6_LOTJA Histidinol dehydrogenase, chloroplastic; Found in the gene: LotjaGi6g1v0269300
GO terms
5

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0055114
Biological process Oxidation-reduction process 1 3.33