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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0314900 |
| Transcript ID | LotjaGi5g1v0314900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuole membrane-like protein; TAIR: AT4G14950.1 SNARE associated Golgi protein family; Swiss-Prot: sp|Q5XF36|KMS1_ARATH Vacuole membrane protein KMS1; TrEMBL-Plants: tr|I3SY33|I3SY33_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63313340..63320142) extracted from Lotus japonicus Gifu genome v1.2.
AATTACTATCCTGAATTAGGGGTTGTAGCATACCTTATGAAAAACAAACTTGGTTGATTTTTTGTTTGTTAACGTATAAT AATCCAACAATTAATTAATTGTATCATAATTAAAATTAAATTTGTTTGATTAACAAAGAAAATGACATTGAACCGTAAAA AAAACATGAGAATTGACAAACACAAACACAAAGAATGATTGTAACTTTTGGTTGTGTCGTGGACGCGGAGGACATCGATC TCGATCATCATAGATTCTGACTCCAATCTTCAACGCTAACCTCCCAATTTCCTCTTCTTGATCTGCAAATTCCTCGAGGG AAAAGGAAAAACAATCCATACCCCTTTTTTGATCCACTCGTGTTGTAGCTGAATTCCGAAGATGCGAGGACCAACAACCC AGAAAGCATAGAGAGGATAAAAGGCGAAGATAGTGCTAACCCAAAACCAAAGATTCGATTTTAGAGCGTGAGAGATAATG GGGTCTGGAGAAACTGCAGCTTCTTCGTCTGGAACCACTAACATGTCTGGCTCAGGCATGTTATTTGATTTCAATTCATT GTTTTGTGATTCTGTTTGTTGTGTGTTCATCTAGATTTTGATTAGATTCGTTACTACGTTGAAAATTGTAATTTTTTTGA CAAAAATTCCGGATCTTGTGGAATTTTTTTGGTTTTGATCTTTTTCAAATTGAATGGTGTTTTTGGTGGAAGAGAGTTTT CCACTGGTTTTGAAAAGCATTACTTTTTGTCGCGGTTTTTCGATAGATTGGATGGGCTACAATGTTATATTCCTTTGAGG GTTGCTGCTAGGGCAAGTATGTAGTCATGACTGGTTATTTTGGGGGGTTTTTTATTATGTGATAGATGATTATTTCAAAG CTTTCTTTGGGCTGAAATGGGGGAGTGGCAAGTTATGAAGAATCAATCGGTCATTAATCTGTTTCAGACTGCGAAAAACT GACCTTTTGGGTTCACATAGGTTATGGCGACTCGGTTCTTTCTTGTGTTCAAAATGGGGGGCTTTCATATGGCATCTAGG CATCCATATTAGCCAGTCTGCACTACTTCACTATCTGTAGCATGAAAATCTAGGAGTTGAAATCGAGTTTTGGGGTGATA GAGGCCAATGACAGTTTTTAACTAAGAATTTTGGGATGGCCATATTATGTTTTACTAATGTCTGACAAGAAGCATTTGCA ATTTTTTAAGTGATTATATGAATCTTTCAAATGGCTCCATGAAAACTATATGTAGATAGATCCACCACTGCTAGAGCCTC CATCATAAGCATCTCCTTTATTGATGAGTTCCGCAATTAGGGTTATGAAAATTGTTAATCTGTTTTATCATATTGTTGAG GTTTGGGTGAGTGGGGAAGAGGGACTTGTCATGATAGGGATCTTATGGTGTTTAGGTTGCATGATTTTGGGAGAAAAGGT GATGGCCTTAAAGCTTAGGTTATATTTTCATCCTCTTTCTGCTTAAATAATTGGTAATTGCAAAATTTAGCTTGCAAGTG TGTACATAGTTAATGGGTTTGACACATTTTGTTCTTGTAGTTAAATTTGTTGCTTGGGTAAATCATGGAGTTTATATTTT CTCGGTTGGGCTTTTAGGGGGTCTAGTTGAAAGAGACACAAGGGATTATATTGAGTTCCATAGTGGTTGCAGTCTTGGTG AATCAAAAGATTTGAGGAATCTAATAAGCAAGAGGACTCAGAAGAGGAAAAGGAAAAATCGTCAAGCTATAAGTCCAGTG ATATATAGGTAGCAACTATAGGAATACAAATATTAATTTTATAAGATAAAGCCTTAAAAGAGATTTGGGAGGGATTCAGA GAGTAGCAAAGTGTTTCTTGCAAATAAAGAGAGTTCCTAGAAGTAAAGAATCATGGTAATGGGGAGAGAGTGTTCAAGAG AAGGCTCAAATTAAAAGAGTGTTTTAAAGCCTGTCTCCTTTGAAAATTGGCAAAAGAGACATTTGCACTCTGTTAAACTA ATCCTTTGAAAAAATTACTTAAAACTAGTGTTTAGATTCTATTTTCTATGTTTCATTGTATCTCATATACTGATTAGAAA TTCTGTGTATTGCAGGGCTTCACAAGAAGCACCAATTGGAGCTAGAAAATTTGACACTAACCACACAACCCTTCAAAACA CTAAAATTCTTCACATTTTCCGTTATTCAATACTTGAAGAAAACTGCATTTTATCTGTTGGGAAAAGGTGGATGGCTTCT GCTTTTAAGTTTTGTGGTAGGGGCTCTTGGCATAATGCTGATCACCTTTGATGGTCCTCATGAAAAGGTATTCTCATTTA TTCTATCAATAACTTATGTATGAGTGTGTATGACAGTCCTAAATCATACAGAATTTCATGGATAATCATTTATTTCTGGG GTCTTTTTGGCTGTTGTACTAACAAGTAATAACCCTTGTTGTCAAATTTGAATCTAGATATTAAAGCCTCAAATCTGCAA TACAAGGTCAAAACCTGAAACCAGTTTTAGTTTCATTCTGATGTTATTTTTTGAACTTTGAAGATGATTCTAGCTAAAAT GAATGTTCATAATTTCGTTACATGTGGTGCTAAATGTAAGATGAATTTTTTTTTGCCGCTTCAATGTTGCAAACAATTAA TATACCCAGTCCTCCCTAGAATAAAAAACCTATGGCCATTCTTCACTTCTTACTACTCTCATATGTTAAATTTCAGGCAG TTTTTTGTTCACTTTTATTAGATGCTCATGCTCCTATGACACTGATATGCACGTTGTTTTTGCAGCATCTTGAGGAGCTG CTTAAATATTTCCGCTTTGGACTTTGGTGGGTCGTCCTTGGAATTGCATCTTCAATTGGTCTTGGTGAGTAAAACGTAGG CATGCATGGATATGACTTATTTTACCCAGATGAGGTTCTTGATTATGTTATACAGTTAGTTACTAGTTAGTAAAACAGTT GGTCTTTAGGCAGCTTGGGTGATTTGGAGTTACAGAAAAACATTTTCTTGCAACACATAGGTTTGATAGTTGATACTTGT AAGCAATAATCATCTATTTGGTACCCCAATATCTTGATTATATATGCCTTGTAGCCTTGAGTTCTCATTTTGTGCTCTTA TCTTGTTAGCTTTTTCGTTTTTTTATTTTCTTTTTGGTAAAATTTTCCCTTTCCGTTTTCTTCAATTCAGGATCTGGTTT GCATACTTTTGTTCTATACTTGGGTCCCCACATAGCATTCTTTACATTGAAAGCCATGCAATGTGGGCGAGTTGATTTGA AAAGTGCTCCATATGATACAATACAGTTAGATAGAGGTCCTTCTTGGCTTGATAAAGACTGCTCCCAATTTGGGCCACCG TTGTTAGAATATAGTTCACACATTCCACTCAGCAGTATTTTGAGTCAAGTTGTGCTGGAGGCTGTTCTATGGGGTATGGG AACAGCTATTGGAGAGCTTCCTCCTTACTTTATCTCCAGGGCAGGTATAATGTTTATATCATATGTCTTGTATTTCTCTT AATTTAAATAAGTCATTGTTAAATCGGTATAAAAGTCTGACTATTAAGATATGCTTACCATACAAATGGTCTATTTACAA GTAACTTTGTCTTTATACTTATTTCATTACCAGGATGGTGTGAAGCTCTGGATCTTCAGTTATTTCGTTCAATGCTTCTT AGATGGAAAAGAAAAGAAAAAAGAATAAGCCATTTAGTTTTTAAAGAAATAAATTATGCCAAGACTATAATAGATTAGCC ACTATTGAAAATTCTCCAAATTAAAGCTCAACCTCAGCTTCGGAACCGTACTAGTTCACATTATCTACCTAATCCAAGTA TATACTTATGGTAAACTGAAAAAATCATCTTAGTGTCTGAAGCCAGGGTATTTTAGTTCTTTTATGTTGTCCGAAAATAA TGGATAATGTTGTATATTATTAATTACTTTTAAAATGAATGAAATAACCAAACCAGAGACTTTGTTTACAAATAATGGAA TTGTTAGAAATTTTGACTCTATTAGAAAATGAATAATTAAATTGTGTAAAACGTGTATAACTAATGGATGGAACACTAAA ATGAATTGCATCCTAATATGCGCCTGCACCTTCTTTGGCAAACAAAATGTTTGGCGTAAGCTGTATCATAGTCAAACTTC ATGTATCTATTTGTAGTTTTCACCACTTCCGTTTTGATTCAGTACTTTTTGATCTCTATCTTTCTATTTCTTCTGAAACT TTCTGAGTTCTATCTCGTCTGATTTAACATGATGATTAACTTACTTATTTTTCAGTAATTTGGTGCTTTATTAGTTAGTT ACTCTATGAGTTGGTTTGTACATGATTCTATTCAAATCATTTGTGTAGCACGCTTGTCTGGTAGCAAATTGGATTCAATT GAAGAATTGGATACTGAAAACAATGGAATCATGGCAACCTACGTTAACAAGATCAAGCGTTGGTTTCTATCTCACACTCA GCATTTGAATTTTTTAACCATTATGGCGCTTGCTTCGGTTAGTGTTAACTTTCTTCTTTAGTAGTATGATATTTTTCTTC ATTAAATAGACCGAACAGTATCTTTTGTGAATAAATTCCCTAGGTATTGCTTCGTTGTATTTTATATAGTAAGTCTTTCC CTTATAGCAAACATATCAGAGTTGGGTTGTTAGTCAGGTAATGGAGATTCTGCAAACAGTGTCTGTCATTTCCCTTTCTC TGTGTTGATATTGAGCTTTCCTTCAGGGGAATAAGCTTGAGGGAGTAACTTATGCTGATTAGTGAAAATCTTTACTCAGT TAGTACTATTTAATGGTTTCTCTATTTTTGTCCTGCAAATTATAGTTGTTTATTCTATATCTTATACTGCTTATATTTGA TTCTTCATAATCCACTACTTTAAAAGTATTTAAATGAGTCATATCCAAATCCTTATTCATCAGGGTGCTTGAGTCCTTTT TTTTATGCCTCTGTACCTATTCTCATATAAAATCGAGTTTAATAGAATGAGTTGACGATTCCTTTGGTCAAGGTGCATCC TACAAAATAGCATTTTCAATTAACTAAACAACATCTGTTGTATAAACATTCGAACTGTCCATTAACTTAGTTTATATTTC AGGTTCCAAATCCTCTATTTGACCTTGCCGGTATCATGTGTGGACAATTTGGCATTCCATTTTGGAAGTTCTTTCTTGCC ACTTTCATCGGAAAGGCAATTATTAAAACTCACATACAGGTTTGTATAAGTTTAGACTCATCTTCTATCCTTACCAACTA ATTTCGCTTTTTATGCCATGCCTTTGCTTTGCTTTTCAATGGCTCCAAATTAAGACTCAGCTTGTTAACATTTTATTATT TATTAAATGGTACTAAAAGGTTTAAGTATATCTAGGCTTACACTGTTACACTGGGTGTGAACAGATCATAACTCATATAT AGATATGTTAGGAACTAGAAAATAGCACAATGACTAAGAGTGAAAATAGGATAGATGAACACTGAATCCTCTGGAAAATA CCCAGAAGCAGTGTTTTAGGGAATTACAAATAACAGTAGAAAATTAAAGATAAGAAACTGAGGCAATTCGAGAGTGCCTC TACTCTCCCAAGCCTAATCCCAAATCAAGCCTACCTTCTCTCTCACACAATACATGCTTATATAATCCCCAATCTCTCTC TCTCTCTCTACCTGCACAGCTCATGCCACCTCAGCAAGCGGTTACTCCTCTCAAGGGAAAAGATTTGGTGCATTGCACCT CTTCCTCTTACTTTCATGGACTCTAGTAGTATTGGGCCTATTCCTAATAATTGGGTTCCTATCAAGATATATTGTGCACA GAGCTTGTAGTCTATAAACTATAATATAATGCTTTTGATTCACCCTCTATGCTATATTTGTTGTGCAGACGGTATTTATC ATCTCAGTTTGCAATAATCAGCTCCTTAACTGGATAGAGAATGAATTTATCTGGGTTCTCGGCCATATACCTGGTTTTGA ATCTATCTTGCCGTCTTTGATTGCTAAGCTCCATGCTGCTAAAGATAAGTATCTCAAAGCATCCCATCCAGTTTCCCCAA ATATCCAGGTAACTGTTGGCTGCAAGTTAACGTGTTTATCAATGTTTCTCATCATCAATAATATCCCTCATAATCTGGTT TTTGCCGAGCTCAATGGCGTAGTGTGATCCACTTCACTTTGTGGGATAAGACTTTTATTGTTGTTTGTTTAAGTGCTCAT ATTGAATGACAGCCTCAAGAGTCTTATTCTAATTTTTGATTACTTTTTCCTAAAAAAAATTGATCTATAATTTTCAGGGG AAAAAATGGGATTTCTCAATTGCTTCAGTGTGGAACACTGTGGTGTGGCTTATGCTTATGAACTTCTTTGTCAAGATAGT GAATTCAACTGCTCAGAGTTATGTGAAGAAACAGCAGGAGAAAGAGCTAGCTGCATCAACAGAATAGAATGTTCATGTTC TGCTTGCACATTGCTTTGTTTTTTTTAAGCTACTCTTGCAAGCAGAAATGTTGAACTTACTGCTCTTCCTGTGAAAGTGA AATTTACTCATTGAATTAGAGTTAGAGGTCTTGTTAGGAGCGCTTCTATAGGCATCAATATACGAACACAATAGGTAACA TAAGCTGTGACTTTCATTTTAGGCAACAATTATTTGGGATGGCTCATAGATTTTTAACCACACTATTGCTGTTTACCATG GAATTACTCTAATCCTACTATTCTTTTGGAATTGCAAAACTATTTGCTTTTTTTTATGAGTATTTGACAGTAGACTCTCT CTC
CDS sequence (LotjaGi5g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCTGGAGAAACTGCAGCTTCTTCGTCTGGAACCACTAACATGTCTGGCTCAGGGCTTCACAAGAAGCACCAATT GGAGCTAGAAAATTTGACACTAACCACACAACCCTTCAAAACACTAAAATTCTTCACATTTTCCGTTATTCAATACTTGA AGAAAACTGCATTTTATCTGTTGGGAAAAGGTGGATGGCTTCTGCTTTTAAGTTTTGTGGTAGGGGCTCTTGGCATAATG CTGATCACCTTTGATGGTCCTCATGAAAAGCATCTTGAGGAGCTGCTTAAATATTTCCGCTTTGGACTTTGGTGGGTCGT CCTTGGAATTGCATCTTCAATTGGTCTTGGATCTGGTTTGCATACTTTTGTTCTATACTTGGGTCCCCACATAGCATTCT TTACATTGAAAGCCATGCAATGTGGGCGAGTTGATTTGAAAAGTGCTCCATATGATACAATACAGTTAGATAGAGGTCCT TCTTGGCTTGATAAAGACTGCTCCCAATTTGGGCCACCGTTGTTAGAATATAGTTCACACATTCCACTCAGCAGTATTTT GAGTCAAGTTGTGCTGGAGGCTGTTCTATGGGGTATGGGAACAGCTATTGGAGAGCTTCCTCCTTACTTTATCTCCAGGG CAGCACGCTTGTCTGGTAGCAAATTGGATTCAATTGAAGAATTGGATACTGAAAACAATGGAATCATGGCAACCTACGTT AACAAGATCAAGCGTTGGTTTCTATCTCACACTCAGCATTTGAATTTTTTAACCATTATGGCGCTTGCTTCGGTTCCAAA TCCTCTATTTGACCTTGCCGGTATCATGTGTGGACAATTTGGCATTCCATTTTGGAAGTTCTTTCTTGCCACTTTCATCG GAAAGGCAATTATTAAAACTCACATACAGACGGTATTTATCATCTCAGTTTGCAATAATCAGCTCCTTAACTGGATAGAG AATGAATTTATCTGGGTTCTCGGCCATATACCTGGTTTTGAATCTATCTTGCCGTCTTTGATTGCTAAGCTCCATGCTGC TAAAGATAAGTATCTCAAAGCATCCCATCCAGTTTCCCCAAATATCCAGGGGAAAAAATGGGATTTCTCAATTGCTTCAG TGTGGAACACTGTGGTGTGGCTTATGCTTATGAACTTCTTTGTCAAGATAGTGAATTCAACTGCTCAGAGTTATGTGAAG AAACAGCAGGAGAAAGAGCTAGCTGCATCAACAGAATAG
Protein sequence (LotjaGi5g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSGETAASSSGTTNMSGSGLHKKHQLELENLTLTTQPFKTLKFFTFSVIQYLKKTAFYLLGKGGWLLLLSFVVGALGIM LITFDGPHEKHLEELLKYFRFGLWWVVLGIASSIGLGSGLHTFVLYLGPHIAFFTLKAMQCGRVDLKSAPYDTIQLDRGP SWLDKDCSQFGPPLLEYSSHIPLSSILSQVVLEAVLWGMGTAIGELPPYFISRAARLSGSKLDSIEELDTENNGIMATYV NKIKRWFLSHTQHLNFLTIMALASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCNNQLLNWIE NEFIWVLGHIPGFESILPSLIAKLHAAKDKYLKASHPVSPNIQGKKWDFSIASVWNTVVWLMLMNFFVKIVNSTAQSYVK KQQEKELAASTE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 63 | 63 | - | – | |
| PANTHER | 18 | 409 | 392 | 1.4E-195 | – | |
| PANTHER | 18 | 409 | 392 | 1.4E-195 | – | |
| TMHMM | 64 | 83 | 20 | - | – | |
| Phobius | 64 | 84 | 21 | - | – | |
| Phobius | 85 | 103 | 19 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 104 | 127 | 24 | - | – | |
| Phobius | 128 | 368 | 241 | - | – | |
| Pfam | 196 | 297 | 102 | 1.0E-8 | ||
| TMHMM | 253 | 275 | 23 | - | – | |
| TMHMM | 288 | 310 | 23 | - | – | |
| TMHMM | 323 | 342 | 20 | - | – | |
| Phobius | 369 | 388 | 20 | - | – | |
| TMHMM | 369 | 391 | 23 | - | – | |
| Phobius | 389 | 412 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0314900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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