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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0326400 |
| Transcript ID | LotjaGi5g1v0326400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methylthioribose kinase; TAIR: AT1G49820.1 S-methyl-5-thioribose kinase; Swiss-Prot: sp|Q7XR61|MTK1_ORYSJ Methylthioribose kinase 1; TrEMBL-Plants: tr|A0A151U7P3|A0A151U7P3_CAJCA Methylthioribose kinase; Found in the gene: LotjaGi5g1v0326400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64377322..64382675) extracted from Lotus japonicus Gifu genome v1.2.
GTGTCTAGTCTAAACTCTAAAGTCTTGACAAGTGATAAATCTCATCAAAATTCTGACCAGGTTCAGTGCACCTCCCACTG GAGAAGTCTTTCTACACCACCTTCACACTTGTCTCTGTTAAATCCGGAAAAAAGCGATAGCTTTATATCTCTTAGGTAGA TTCGATTTATGACGTGAGTTGAGGTTAATATAAACAAGGTGAAGGTAACTATAGTGTTGAATTTCTACAAATCAGGATCC ACCCTTGTTATTGTTAGCGTCTCTCTTCCAAAAGTTAAAGTAACATTCCCACCACTGTCGCCGCCGGTAACAATGGCTTT CTCCGAATTCCGACCACTCGATGACAAGTCTCTGATCGAATACATTAAGGCTGTCCCTGCCCTCTCTTCCATCCTAGGCA ACAACGTCTCCGACTTGTCTGTCAAAGAAGTCGGAGATGGCAACCTTAACTTTGTCTTCATTCTCCTCAACTCCTCTGGT TCTCTTGTCATCAAACAGGTAATTCATAAATCATGGGCACTTGCAAATTTCGTTTGTTTTTCTGGGGTGTTGAAATTCGT GCTGTTTTTGTAGGCTCTGCCTTATGTTCGTTGCATAGGGGAATCATGGCCGATGACGAAGGAGAGAGCATATTTTGAGT CTATGGCTTTGAAAGAAGAGTCTCGGTTGTGCCCTGAGCATGTCCCTCAAGTGTATCACTTTGACCGTACCATGTCTTTG ATTGCTATGCGTTACATTGAGCCTCCACATATAATTCTTAGGAAAGGGTTGATTGCTGGGATTGAGTATCCTTTGCTGGC TGAGCATATGGCTGATTTCATGGCTAAGACACTCTTCTTTACTTCTCTCCTTTTCCGCACCACTGCTGATCACAAACGGG ACGGTATGACCTTTGCCATGTTACTTTGTATTGGAAACATTGATATCCTGATGTTTTTGTTATTAAGAAAAGAGAACCAT TTCTCTGGGTAGAAGATGATTCATGTATACCTTATTACATAAGCTAGCTAGGCTAAGTGCATACTAACTAACAAACTAAC GAACTCTTCCTTTTCGACAGAAGATTAATGAAAGAATCACTTATAAGATTCCACACTTTTCTGTTGACACCAATGCACTC ATTGCAAGTTAACAGTGAACATAACTCCTCTTATTGATTGTGATGGAACAAACATAGTGACTAATGGATGCTCCTGTAGT TGTATGGGCATTGCTTCTTTTGCCTTAATAATTGTTTAAGGGAGATATAGCTAAATAAGTCCATATATATGGTAGAACAA TTCTCACTGCTGAGCTAGTTTTTTGGGTAGAATTAGGCCTAACCCAAATTCTAAATGTGATCATAGCCTATGGATCTGTT TATTGGGTCACCCAAATATGTCCAATCCTGCAAACTTCACTGGAATTCTAAGAAAAATTAAGCTTTATGGATGAAAATGG ATGAAAGAAATGATATTATCTTCCTGTTAGTATAAGAAAGGTTATCACGTATTATCTTTTTATGTCAGCTCGAGGCATGT TTAGCATAAACCTGATCTCATGCTAGTTTCATGCAGTTGGCGAATATTGTGGGAATGTGGAGTTATGCAGGCTCACTGAA CAGGTTGTTTTCTCTGATCCTTACAAAGTTTCTGAATATAATCGTTGGACTTCCCCTCATCTCGATAGTGATGCGGAGGC TGTTCGGGAAGACAATTTGCTGAAGCTTGAAGTTGCTGAGCTCAAATCTAAGTATTATGACTCTCTTTTTTCTCCATTTT ATGCAGTAGTTATGTTGTCAGCATTTTGTTTATAAGAATTTATATCTGTGCAGGTTCTGTGAGAGGGCTCAGGCACTAAT ACATGGAGATCTACACACTGGTTCTGTGATGGTAACTCCTGAATCAACACAAGTTATTGATCCAGAATTTGCATTCTATG GACCAATAGGGTTTGACATTGGAGCATTTTTGGGAAATTTGATTTTGGCTTTCTTCTCTCAAGATGGACATGCTGATCAA GCAAATGATCGAAAAGTAGGTCCCCTTTTCTCACATGTCCTTTGCACAGTCCTTTCCTGGGCTCTTCTTTTTAATATGTA CTGTATTTCTGGTTATTCTTCATAATCTAACTTAAAAACATGAATTCTCTGTCTCTTTTTTTTTAATGTCTTAATTTGTA TTTAACTTTGGTAGTTTAGTTTCATGGCAGAGATGTCAAGGTATTTGTACCAGCAATAAAGTTTATGAATTTTGCTTCCT TTGCGTTTATTTATAGTTTTGAAATTCCCTTGTGTTGTCTGCTTGTTTTGTCTATGTTGTGTCAAGAACCGGTGCCTAGT TATCTTAATTCATAGAAGTATCCTTTTGTTTGCATCTCGATGAGGTATCAGAATTACAATTTATACCATTTGAATTTGAA AAGTTACAAACATAGTTTCCGAGAATGTGAGCTCTCTTAGCCCAACACTCGTAACAAGTGAAGACTTGGTAACGGACAGA TTCATTTGCATGGTTTGTATTTCGTGTTCAGTGCAAGGTTTGTTAAGAGAAACTGCATTTTAGATTATATAGAGATTGGA CAGCTCATACTGACTAGTTTTTAGAAGTTCCCTTCTCTGTTTCTGTTTTTCCTTCTATTTGATCTTTGTTGAGGGTCTCT TATGATTCTATGTTTCGTACTTCTATTTCTTTCTTTGTTTTAAAATTTCGTATTTTATTTAAAAAATTGGAGACCTGATC GGAACTTAGGCTGCTGTTAGCTGAACTAGTACTGTATTGTTTATCTATTGCTTTATCTTCTCCTAATTTGACAAGATCTT TTCCTTTCAGTTGAGTTACTGTGCATTGCAATGAAAGATAAATGAAATAATGAGAATTGGCCTTTAAAAATGTAATTTTT AATAATTCCTGAAGAACATTGACTATTGGGGGAAAAGTGTTATTCTTTGTCTAAAACACTACTTTATGCAGGCATATAAA GAGTGGATTCTTAAGACAATTGAAGACACTTGGGATCTTTTCCACCAGAAATTCACTGCACTTTGGGATGAGCATAGAGA CGGTGCTGGTGAGGCATATCTTCCAGCAATCTATAACAATCCTGAGGTCCAGCTGCTTGTACAGAAGAAATACATGACAG ATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGTGAGACTTTTCTTCTCTAATATTTTTTTAGGTT GCAATAATCATGTTTACTAGAAATTCTATATAATTTCTGTATGCTCTATGATTTATTTTTCAATTTTCGATATATAATAA TTAATGATCTTACAACTAATAGGGGTACAGATGCATGTAGACAAAATTATTATTTGATCTCCTTCACATCCTTGTCTTGT CATATTATTACTAGTACTTTAATTTCTTGCTCTTAAAAGTTTGATTTCCTTTTCATAGAAGTATTATTGAAACAAACTTC TCTTCACTAGATATTTGAATTCCTGTGTGTTATGTGTCCAGAGTCAACCAAGATAACTTTCAGTCATAGCCTGAGAGATA ACATAATAGAACTGTTAGAAATGTTATATAAAATCATTCATGTTTCTTCACCAAGTAGCTTAAATATTTTTGGTAGTTCA TGATATGGTTAATAAGTTGAATTGAGATTGTTCATTTTCCAAGCTTCAAGCCCAATTAGCTCTTACGTGAGGAGACGTGT TACAAAGTGTAAGCTTTTGGGTTAGTTTGTTCATGACAGGAACGCATCCACCTTAATATGTTTATATTGCAGTGCAGTCT TTTATTGGACCATGAATTTAATACTGGACCATTATGCATCATATATTCTTATGTTATATTCACTTCACTATATATTATTT TAAAGGAAAAGTAGGTAGATTGGACATTATAATGCTGACAACACCCTTGATGTGCTAGCTTTGTGTCCTGATCTTAGTAG AGTAGAATGAGTAGGAACTTCATTTGACGATTTGTATGACTATGTTCATAATGAATGCAAAAATCCATATTTTTGTTAAT GCGTCTAACACTTGCATTTTAATTATTTGATTGGCAGGAGAATTGTTGGGGTGGTACATGTTGCGGATTTTGAGTCAATT ACTGATGCTGATAAACGGGCAAATTGTGAAAGGAGGGCGCTTAATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATT TGAAGGAATAGCTGAAATTGTTTCAGCAATCAGGGAATTCTAGTTCTAGTCATGGCAAGGTTTTTCTATATCAAAACCTC CATCATGGATCTTTTTTTCTCTTTTACATTTTGGTCGCATGGGTGTTTGTGAGGCATCCAAGTAAGAGGTGACTGAAAAT AAATAAATAACATCACCAGCTTTAATTTTTGAAAAACAATTGAAAAAGATGCGTGTTTCCAGTTTCTTTGTGTATTTGAA TATAGCATGGGAGAAGCTGGAATCTTTAAGGTCGATCCCATGTTGCACTTGTACGCTATAGAGTGCAGTAGTAATTTGAT TAGTGACATGAAGAAGCATTGTGATGACCAATTTAACACTGCAAGGGATCGGATTCTTTTAATGGAGCCATAACCATGGA CTAACATGGTGTTCTCTCTAGCTTTATAGCAAGAGATGCAGATTAATGGAAGTATCTTAGGGGAACATATGGCACTTTTC AGTAGCAGTGCCAATGCTCCTCAAGATATAGGATCCTCTCAAGGAGGGAGAGGACGTGGAAGGTACAACTTTGGTGGAAA ATGAGGAAACAATGGTGCCAGTGTCAAATGAGCACCTAGGAAAATTAAACATATAGTGGAAACTTGCTATCTAAAGCATG ACTTTCCAGCCTAAATAGGCGAAGCTATCATGCGTAAATAGATTCAATGTTATCTTCCTTTTTGTTTATGAAAGACTAAG GGTATACTTAGAAGATAAGAGAAGCATAGCCTATATAGGCGGAGAGACATGGAGGTGAATGTCAAGGCTGTCAAATTAAC CACGGCGGGCTAGAACGTCTACAACCTTATTAATTTCTCTGTAGTCATGACTTACAGGACAATAATCTAACAGAGACATA AATCTGTTGCAAGTAGACATCAATTGCTAATTTCGTACACGTTGACTGTGGAAAAGTCTCAAGTCTTCTATGAATGATAT CAAAGGGGAAAATGTGGCATGCTTCTGGACCAAACAATTAATTTATGGGAAATAATAATTGCATATAAGGGTGGATACAC CTAATCTTAATGGATGATATAATGGAACAGAAAAAAATAAAATAAAGAAGAATTGAAAATACGGAAAGTCCATAGTCCAT ACCACAAACACAAGAAAGTAAGAGAAGAGATAAAGTAATAAACCTATATAATGTATCACGAATGTGTTTAGAAG
CDS sequence (LotjaGi5g1v0326400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCTCCGAATTCCGACCACTCGATGACAAGTCTCTGATCGAATACATTAAGGCTGTCCCTGCCCTCTCTTCCAT CCTAGGCAACAACGTCTCCGACTTGTCTGTCAAAGAAGTCGGAGATGGCAACCTTAACTTTGTCTTCATTCTCCTCAACT CCTCTGGTTCTCTTGTCATCAAACAGGCTCTGCCTTATGTTCGTTGCATAGGGGAATCATGGCCGATGACGAAGGAGAGA GCATATTTTGAGTCTATGGCTTTGAAAGAAGAGTCTCGGTTGTGCCCTGAGCATGTCCCTCAAGTGTATCACTTTGACCG TACCATGTCTTTGATTGCTATGCGTTACATTGAGCCTCCACATATAATTCTTAGGAAAGGGTTGATTGCTGGGATTGAGT ATCCTTTGCTGGCTGAGCATATGGCTGATTTCATGGCTAAGACACTCTTCTTTACTTCTCTCCTTTTCCGCACCACTGCT GATCACAAACGGGACGTTGGCGAATATTGTGGGAATGTGGAGTTATGCAGGCTCACTGAACAGGTTGTTTTCTCTGATCC TTACAAAGTTTCTGAATATAATCGTTGGACTTCCCCTCATCTCGATAGTGATGCGGAGGCTGTTCGGGAAGACAATTTGC TGAAGCTTGAAGTTGCTGAGCTCAAATCTAAGTTCTGTGAGAGGGCTCAGGCACTAATACATGGAGATCTACACACTGGT TCTGTGATGGTAACTCCTGAATCAACACAAGTTATTGATCCAGAATTTGCATTCTATGGACCAATAGGGTTTGACATTGG AGCATTTTTGGGAAATTTGATTTTGGCTTTCTTCTCTCAAGATGGACATGCTGATCAAGCAAATGATCGAAAAGCATATA AAGAGTGGATTCTTAAGACAATTGAAGACACTTGGGATCTTTTCCACCAGAAATTCACTGCACTTTGGGATGAGCATAGA GACGGTGCTGGTGAGGCATATCTTCCAGCAATCTATAACAATCCTGAGGTCCAGCTGCTTGTACAGAAGAAATACATGAC AGATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGGGTGGTACATGTTGCGGATT TTGAGTCAATTACTGATGCTGATAAACGGGCAAATTGTGAAAGGAGGGCGCTTAATTTAGCTAAGATGCTTCTCAAAGAA AGAAGAAAATTTGAAGGAATAGCTGAAATTGTTTCAGCAATCAGGGAATTCTAG
Protein sequence (LotjaGi5g1v0326400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFSEFRPLDDKSLIEYIKAVPALSSILGNNVSDLSVKEVGDGNLNFVFILLNSSGSLVIKQALPYVRCIGESWPMTKER AYFESMALKEESRLCPEHVPQVYHFDRTMSLIAMRYIEPPHIILRKGLIAGIEYPLLAEHMADFMAKTLFFTSLLFRTTA DHKRDVGEYCGNVELCRLTEQVVFSDPYKVSEYNRWTSPHLDSDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTG SVMVTPESTQVIDPEFAFYGPIGFDIGAFLGNLILAFFSQDGHADQANDRKAYKEWILKTIEDTWDLFHQKFTALWDEHR DGAGEAYLPAIYNNPEVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVVHVADFESITDADKRANCERRALNLAKMLLKE RRKFEGIAEIVSAIREF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 120 | 120 | 2.6E-48 | – | |
| PIRSF | 1 | 417 | 417 | 3.7E-163 | ||
| PANTHER | 2 | 415 | 414 | 4.5E-203 | – | |
| SUPERFAMILY | 5 | 416 | 412 | 7.73E-87 | ||
| Pfam | 37 | 289 | 253 | 3.5E-17 | ||
| TIGRFAM | 38 | 412 | 375 | 4.6E-123 | ||
| Gene3D | 121 | 417 | 297 | 2.4E-129 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Methionine biosynthetic process | The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins. | ||
| Molecular function | S-methyl-5-thioribose kinase activity | Catalysis of the reaction: S-methyl-5-thio-D-ribose + ATP = S-methyl-5-thio-alpha-D-ribose 1-phosphate + ADP + 2 H(+). |
Expression pattern of LotjaGi5g1v0326400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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