Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0009086

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Methionine biosynthetic process
Full defintion The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
Subterm of

Relationships

The relationship of GO:0009086 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0009086, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCjl
ISBN

· ISBN: 0198506732

, · pages

Associated Lotus transcripts 26

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0068489.1
– PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Glycine max] gi|356547867|ref|XP_003542326.1|
GO terms
3
Lj0g3v0222539.1
– PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Glycine max] gi|356514027|ref|XP_003525709.1|
GO terms
3
Lj1g3v3975830.1
– PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like isoform 1 [Glycine max] gi|356571744|ref|XP_003554033.1|
GO terms
3
Lj1g3v3975830.2
– PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like isoform 1 [Glycine max] gi|356571744|ref|XP_003554033.1|
GO terms
3
Lj1g3v4446860.1
– Selenocysteine methyltransferase [Astragalus chrysochlorus] gi|336359707|gb|AEI53593.1|
GO terms
3
Lj4g3v3113380.1
– PREDICTED: aspartate-semialdehyde dehydrogenase-like [Glycine max] gi|356524624|ref|XP_003530928.1|
GO terms
7
Lj5g3v2112230.1
– PREDICTED: methylthioribose kinase-like [Glycine max] gi|356536154|ref|XP_003536604.1|
GO terms
2
LotjaGi1g1v0646100.1
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|P93263|METE_MESCR 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|Q71EW8|Q71EW8_SOYBN Methionine synthase; Found in the gene: LotjaGi1g1v0646100
GO terms
3
LotjaGi1g1v0646100.2
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|P93263|METE_MESCR 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|Q71EW8|Q71EW8_SOYBN Methionine synthase; Found in the gene: LotjaGi1g1v0646100
GO terms
3
LotjaGi1g1v0646100.3
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|P93263|METE_MESCR 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|Q71EW8|Q71EW8_SOYBN Methionine synthase; Found in the gene: LotjaGi1g1v0646100
GO terms
3
LotjaGi1g1v0646100.4
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|P93263|METE_MESCR 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|Q71EW8|Q71EW8_SOYBN Methionine synthase; Found in the gene: LotjaGi1g1v0646100
GO terms
3
LotjaGi1g1v0646100.5
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|P93263|METE_MESCR 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|Q71EW8|Q71EW8_SOYBN Methionine synthase; Found in the gene: LotjaGi1g1v0646100
GO terms
3
LotjaGi1g1v0716600.1
– Homocysteine S-methyltransferase-like protein; TAIR: AT3G63250.1 homocysteine methyltransferase 2; Swiss-Prot: sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase; TrEMBL-Plants: tr|F8QPI4|F8QPI4_9FABA Selenocysteine methyltransferase; Found in the gene: LotjaGi1g1v0716600
GO terms
3
LotjaGi2g1v0109800.1
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800
GO terms
3
LotjaGi2g1v0109800.2
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800
GO terms
3
LotjaGi2g1v0109800.3
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800
GO terms
3
LotjaGi2g1v0109800.4
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800
GO terms
3
LotjaGi2g1v0277100.1
– Homocysteine S-methyltransferase-like protein; TAIR: AT3G25900.1 Homocysteine S-methyltransferase family protein; Swiss-Prot: sp|A4ZGQ8|HMT1_BRAOT Homocysteine S-methyltransferase 1; TrEMBL-Plants: tr|I3S0S3|I3S0S3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0277100
GO terms
3
LotjaGi4g1v0458700.1
– Aspartate-semialdehyde dehydrogenase, N-acetyl-gamma-glutamyl-phosphate reductase; TAIR: AT1G14810.1 semialdehyde dehydrogenase family protein; Swiss-Prot: sp|P49420|DHAS_PROMA Aspartate-semialdehyde dehydrogenase; TrEMBL-Plants: tr|I1KQD8|I1KQD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0458700
GO terms
7
LotjaGi5g1v0311700.1
– Homocysteine S-methyltransferase-like protein; TAIR: AT3G22740.1 homocysteine S-methyltransferase 3; Swiss-Prot: sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3; TrEMBL-Plants: tr|A0A151U6Y9|A0A151U6Y9_CAJCA Homocysteine S-methyltransferase 3; Found in the gene: LotjaGi5g1v0311700
GO terms
3
LotjaGi5g1v0326400.1
– Methylthioribose kinase; TAIR: AT1G49820.1 S-methyl-5-thioribose kinase; Swiss-Prot: sp|Q7XR61|MTK1_ORYSJ Methylthioribose kinase 1; TrEMBL-Plants: tr|A0A151U7P3|A0A151U7P3_CAJCA Methylthioribose kinase; Found in the gene: LotjaGi5g1v0326400
GO terms
2
LotjaGi5g1v0326400.2
– Methylthioribose kinase; TAIR: AT1G49820.1 S-methyl-5-thioribose kinase; Swiss-Prot: sp|Q7XR61|MTK1_ORYSJ Methylthioribose kinase 1; TrEMBL-Plants: tr|A0A151U7P3|A0A151U7P3_CAJCA Methylthioribose kinase; Found in the gene: LotjaGi5g1v0326400
GO terms
2
LotjaGi6g1v0193300.1
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|Q42699|METE_CATRO 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|I1LXY1|I1LXY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193300
GO terms
3
LotjaGi6g1v0193300.2
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|Q42699|METE_CATRO 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|I1LXY1|I1LXY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193300
GO terms
3
LotjaGi6g1v0193300.3
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|Q42699|METE_CATRO 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|I1LXY1|I1LXY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193300
GO terms
3
LotjaGi6g1v0193300.4
– 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|Q42699|METE_CATRO 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TrEMBL-Plants: tr|I1LXY1|I1LXY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193300
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0009086
Biological process Methionine biosynthetic process 1 3.85