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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0327900 |
| Transcript ID | LotjaGi5g1v0327900.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Na+/H+ antiporter; TAIR: AT3G19490.1 sodium:hydrogen antiporter 1; Swiss-Prot: sp|Q9LT68|NHD1_ARATH Sodium/proton antiporter 1; TrEMBL-Plants: tr|A0A0L9TGA2|A0A0L9TGA2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0327900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64507654..64517794) extracted from Lotus japonicus Gifu genome v1.2.
CGGAATTAGTAGGAAATAGTTCGAGTGCGAGTGCCACTGAATGAGAGGTACATTACATTTACATAGAAATTGGAATAGAA CACGACAAAGAACGAGTTCGATAAAATTAACAAATTGAATTGCTCTTTCTTTTTCCACTCATGAAACTGCATTAACCCTG TTTGTTACCCCATCTTCGCGAAGAAGAACACCTCCCACTGTTCCTGTTGGATACAGTGGCTCCAATGGCTTCTTCGCTTT CAATCGGGACACACTTGTCCAACTTTCAACATCTGCGGAATCCTAGAATTCCACTTCATGGTCTTTGCCCTGTTGATTAT TCGCCGTCATCTCAATCTCAACCCCTTTTTGCTGGAATCAGATTTCGAGCTTCCTCTCCCAGGTTGCTTCGTACTGTTGT ATTGGCACGCGCAGAAGATAAGGCTAGAGCTCCTACACCTTCTTCGTTTCAGTCTCAGCAAAATTCCCAGGAACAGTTCC AGGTTCGTTCTTGTTCTGTATAATCTAATCTCATTAATCCTTTTAGTGCATGTTTGGAAACACTTCTACAATTGATTCTG AAACCAAAATCAATTCTGGGTTGCTGGGTGTCACTTGTCAAAATTGATTATGAGGAAAGATGAGCTGATTCAAACATAGC TAGTTTATGAGTCTGGATATTTGATGTTGGTTTGCATATTCCGAGTTAAGGGCACCTTAGCAGCCCATTTAAGATTCTAA ATTTGTGATAAAATGACTGAATTCAAGCATTTTATTTGGAATAAGCTTCTTAACATTCATTCATGTTATGATTTTTGTCA CGGGGTTAACTCTACTTCGTCGCTGTAATGTTTAACTGATGAGAAATGCTATGAATGTGAGTAAAATGAATCTGCTTCTC GTGTGCTGATGCTCACACTGCGAATAACTTTGAAATTGGTCTCAGGACATGACGTCAGAATCTGGAAATTGTGATCCTCT ATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCAGCCTAAGACTGATTTGCTCAAAGCGGTTGCGA TATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGGTGGCAGCTAATCAGGTCCGTCAAAGTCTTTTG CCTGATTTCACTTACAATAAAGGGCATGCATTTGGTGAAACATATCTAGATCTGCTCGATTCTAATAGTTTTATTTTTAT ATCACATCTCATTGCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCATATTTGAAGAATCTCTA GCGTTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTATTGGGGTAAATTTCTATCC CTTCGCGCTTTGGCTTTTGAGAATGTTGGTTAATTTCTGATTAGTCAGAACTTTATGTGTTCATTGTTATTTGTCATGCT TTCAAGATTTAAGTTGCTGTTTGTGTGACATATACAGCATCTTTTCACATTGACACGCACTTGACACATATTTTCCAATA TGCATATCTACAAGTTATAATTGAACAAGAGATGCCCTTATCTGGCATTCAATTCTTTCAATGCACCAGCCAGACTACTC TTCTCAGTGCTCAATGCTGTCAAAAACAAGTATCTAATACCAATAGTCATATATGTACTAGCACTGCTCTTGTTTTCTTT TTTTTCCTTGGGGGTTTGCTTACTTAGTCATCTTTGCAGAACATAAGGAGCCGCAAACAGGGATTAGAATAAGGACACCT TCTATGTACCTTTTTCCATTGTGTACACACTTATGCCCTTTTCATCTCCCCAACCTTTAGTTGAAGCACAATTTAATGTT TGAACCAACATTAACTACAAGGAAATAATATTTTGGGTTTGATCTCGTATCTGTACGGAACTTGTGATTTGGAATGTTTT CTTGTACTGTCCAATATGAACTTGATGCAAAAATAAGAGTTGCTTTTGTCGCCTCTTTGTATTTATTTAATAAGGGCCTG GTATGGTTATCAAAATATTACTACCTGTGCTTGGAACAGATCAAATTTCTTTGGCTGAACCATTCGAAAATCAAGAGAGA ATTGTAACGCTTGATGGTATTTCTTGACCCAAGGAATTTTAGTTAATTTTTTTCAAACTGCACAAGAGGTTACCTTGAAG ATTATGTGCTTTTTATATGTGGTTAATTTTTTTTCAACAATTGATATCTACCCATGCACATGTTATATTGTTATAAAATA AGAAGCAACTTTTACAATTGACATAATGGCAACTAGGCGGCTCCTGATCCCTCTTGTGTCTCCCTAGTATCTGTATCCCT GAACACATCCACTTGATAATTGTTCATCAGCTGATCAGTTAGGTACTTAGGTACACATACTTAATGTTGGGAACCACTTT GGCACAACACTTAACAGATGCAAGTTGGCTTTAAATATACCCCATTGTCTTTTCTTTGCACATCTCCATTCACTGCTCAG ATTGTATGTCTATATTTTGAAGTCAGTTTTTCTCCCCCACTCTTCTGATTGGATCTTCTACTGGTATTTTCTTTTGTATT TTATGAATTGTCTATAGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGCGGAAGTCAGCGAAATA GTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGCTAGTTACTGACAATAT AAAAACCCGAAACCCACGCCTTCTGCTCTGGGTGGTAAGTGCCTTACTGCTTCGTCTCTGCATCGTTGACCAAGCTAAGT AAACTACGTATCAGACAATTTGTGAAATGAAACTTCTTGGAAATTTGACTACATTAGTTGTTGAACATTATAGTTTATGG TCAAGTTGTGTACATAGAGGCTGTAGTACCATTTAGAACACAAAGGGCTCGAATTTCAAGAGTCCCTTCTTTCAAATAAG TACGGCACACATTTCAATATTTGATACTTAAAAATGTTGATATTTAAAAGAATAAAAGATATCATAAACAAAACAAAAGA GTGTACTAGACCATGCTCCCCCCAACCCCAGAATCCTGAATTTTAAATCTTCTGTTTGCTTCACTAGTTTTCTTTCGTCT CAGCAATGGAAGTTGACAAATTAAGATTGAATTTGCAGGTTGGATTTGTTACATTTTTTCTCAGTTCAATTCTAGACAAC CTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGTATGTGTTTGTTAT GTTAGCTCAGTGTAATGTTTTCCCCATGTGTTGTATCATGTTGTAGTGTTAGATTGACCATATTTTACTAAAATACCACA TTAATAAGATTGACTGGAGATATAGATGCATCACCTAAAGTTTCAGTCACTGGACCTCTGTAGATGCTATGACTGGTCCA TACCTGTAGGCTCTGGCAAATTTATATTGCATTACCCTTGTTTGCTTTTTCATTCTTTTAAGAAATCTGAACACTCATTT GAGAGATCTTTACTAATTTTCCTCCAGAGATGAATTTCATTCACATTAATTTACCCGTTCCTGCTAGTGCTTTTTATTCA TAGATGAGATCAAATGTTATTCGCTTTTCCATTTTAGTTGAAATCAGCATTAATGATGGATTTCTTGATTTTTGTTGTGG GCATAAACATTCAGAGTGTGTGGGTCAATCTTCTAAATTTGCTGTTTACAATATTCGCCAATCACCAACTATTCTAAGGT TTGGCTATACCTTATCAAATCATCAAGAAATTTCTTTGGATTCTATTGACAGGATTCTTGGAGGTGTTGTTGTAATAGCA GCAAATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTATGGATACATGGTCAAATATCTACATT ACCAACAATGAAGGTTATCTCATGGAAAAATTATTCCAATATGATATGTCTTTTTGGATCGTGGGATTTTCTTTCCTGCA ACTACATAATAAATTATAGTGGTGAAATGAATTTAGCACGACATACTGAAATATTCTTTGGATATAATGATTAGAAATAT ATAATTTAGGCCCTAAATTAAGATTTCCTTGGTCACAGTCTTTCTGTTACTTAGATTCAATTGCATGAACAGTCTGATTC AATCTCGTGCAATGAAGAACTAACAAGTATCCATAATTTCATTTTTTCGTTATTTACAGGATTTATTTATACCTTCAGCC ATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGGTACTCTTCTTGCACTGCAGAAGGCTGATTTGAAAAGTG AGATTTAGCTTAACATATTACAATTTAGATGATGTTGGTTTTTCTCCATCTGTTCAGTGAAGTTAGTGGGAAGGGCAGTG ATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGAGCTTTGATT TTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTGGTGTGCTTTGGATCCT CACTGATGCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCAAGGATAGACACTCAAG GAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGGTAATAAGGAAAGGAAATGTATTTTACTTTTTTCTAATGC AGGGAAGCTTTGGATGATAGCCATATGTTCCATCTATTTTGAACTTAGGAGGGTACTTGCCATGACTTATTTGGTTTTAT TCCAATGTAGTTATTTCATTCTGAAAAGATAATATGTTACCTGATTCTCTTGTCCTACTATGAGGATGTTCCTCTTCATA TCCGGTGAAAAGTCCTACATTGACCAGAGATATGGTCAAATAAGTCCATATAAAGGGAAGAACAACTCTCAACTGTTAGC TAGGTTTTCTAAGATGGTATCAAAGCCTATACTAGATCCGTTTATTGGGTCACCCTCAGATGTCTTGTCCTCTGCAAATT CAACGCTCCAGATACCTCTTGGCAGCAGAGGTGTGTTGTGAAGTATCACATTGACTAGAGGTATAATCAAATAAGTCTCC ATAAAGGGAAGAACAACCCCCCTCCTAGCCCAGGGTTACGCCTTGCCTGAATTCTAAGAACATGAATACCTGTCTTTTGG GATATCATTACTTACAGAATACAGCTAAATGAGTTTCAAGTTCAAGCATTCTTTTGCATGCATTGTGATTGCATATTCTT CCCTCATATAAATTTCAATGTCTTAAGTCCTAACTACACTTGTTGTATTTGATCAATTTTAATGGTCATGTTCTGCAGTC TGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGAACTGATTGCAAGTGCT ATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATGACGTCACTGCTTTCCC TCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTTATTGGCTCAGCTGCTG GAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACTTTCGAAAGGTATTCCCTACTGTACACTTAGGCTGC ATTTGGAGTGGAGAGTTTGTTTGAGTTTATTTAATAGTATAAAAATAGCTTATCACCTACCTATAAGCTGTTTTTAGTTT ATTTTCATAAGTTTCTCATATTAGCTTTTGAATGAGTTCTTATAACTACTTCTTAAGTTATTTTGAACTAATTCAATAAG TTTTTCAAATAAGCTAATGAAAGCACTTATGTGATGAGTGTGTATTGCTATAAGTGTTTAATTAAGTTTTTTACCCAACG TATTATTGAACATGTTGATGTTATGAAATGTTTGTGCATATTTCATAACAGAATTCATTTATCTCGTTTGTGCAGATTAG TGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAACGTTTCTCTACCGACAA CTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAAATTGAGAATTCAGAGTTCATTTGATTCAGTTTTTATGGGCATCAA AAGCAGCATGGTTTCAAAATTATGAATACAAGTAGACTCTAGCATAAGTTGGCAAAGGTTAAGATTTTGATCAACAAGAA GTTATGTATAGGGGCGTCTCTCAAATGAGAGCATAAGAGGTTAATCTTTATTGTATAATCATATATGAATGATCAGGATT ATTTTATTTAAATTTCATTTTGATCATCCATTATGATTATGATTAGCTCCAACAATGAGATCATCCTCTCACTTGATACA CTGAATAAATCCTTATGTATGTGTGTTTGGGAGCATATCAGGTACGACTTACGAGTGCAAAATTTATTTAGACAAAATTA ATAATTCAATTGTAATGCCTGAGCCTTGAGTTATGAAATGTTTATTCGTATAAAACATCAATAATTAATTTCACTATTTT AGTATGAAAAAGCTTTGTGATATTTGTAGCCTGTGATTTATAAATAACGTATATTTTTAAATTAAAAAAATAATTTAAGA TTAGTCAAAATCATTCAGCTATTTGGACACAGCTTATTTGTGATTTTAAAAAGAATGATATTGCACACAAGAATATTTAA ATAAATATTACCATGCCTTGTAAAAAAAAATAGGAAAAATGAAATAAAAATTATATTGATAGGCACAAATAACAGTGTGA CGGAAGAACTTTATTCTCAATTTACTTTAGGTGCCCCGTGTATGTTTGAAAAGCTATCCAGTTTATACATATGGAGAAGT GATTATGAAAAAATAAAAGACCACCTAAAAGTGGCTTTTGTTAGGAGAGAAGTGATTAAGAAGATCCAAATATAAGTAAT TCTTTGAAACTTCAAACAGCATTTGACCAAGAACTCACTGAACCACACCATTCATTGCAAAGCTGAATTATTCTTTTTTT TAATCACCCAAAACTACAACTACACTCAATTCATGATGATGCATCAAAATCGGGCATATCTGGCAGCCATACCCAATCCA ATATCTGTGGGGAAAAAAACAAAAAAGAGCCAAATGATGAGACAACCATTTTAATCTTACAATTTAAGGAAAACGAATTC TTCAACAGCAGGAATGTCCCCAATCTTCTTCAAAGTTTGTTTGGTAGGTGGCTCATCCACTCCAATTGCCATCACAGCTT GTTTACGAGGAGCAATCCTTCCTACACTCATGAAGCTCACATTCACATTCTCCTCACCCAGAACGCTCCCCACCTTTCCG ATCATCCCTGGCTGATCTACCTGCCTGCAGAGGATAATGCTGCCTTCCAAACTCACATCAACTTCAAAAAATCCAACCTT TGTCAGATGGGGGATGCCATCTTTCACCCGGCCCTCAACCTTAATCTCGCCGGATTCTGATATGGCGCTGGCGAATCGGG ATTCCACATTGGCAATCTGGACCTGGATGAACTCGAGTGGATTCTCAGGTGAACCATCAAGAATGACCCTCTCCTCAGTT ATCCTGAGCCCTCTTTGTTTAGCAGTGAAATCAGCATTAACCAAGTTCACAAAAACACTGGATATGGGCTCAATCAGACC CTTGATTATCATGGCACGAAGAAGACGGGTGTCAAGATCATCAGGGGCCCTTGCAGAAGCATAAGTCACTTTCACTGTTT TTACACCGCTTCCTCCCGCTACCAGCTGGACAGCCAATCTCCCTAGTTTCTCAGCAAGATCAACAAATGGTTTTAACTCA GTTATCACCTGTAGTCACGAAGGAATGAAACAGATGTTGAAGTCAAGCGATAACACTCAATAGGAATCAAATAGATCTTA AAGTCGAGCAATAACACTCATAGATAATATCCCTATGATCCCAATTACTTTTATCAGATTTCTCAAACCAAACCTTCACA TTACATTAAGTACTTAATTTGAAACAAGAGCAAATAACAGTTAAAGAATAATAAGGCGCCGTGTTCCAAATATTATTTTC AATATTTGAGCCTAGTTAAACAAAGAGTTAATGAATACAACAATGATTTTCTCATGCCAAACAGCTGTAACACGAAGTCA AGTTATTCACCATGAAAAGGATACCAGTTAGGAAGAGGAGAATACCAGTATCATGATGTAAGATTATTTATCATGAAATG GAAAAGGCTTAAGATGAATTTTTCTACAGTACCTCTGAGGGGACCATTGGTGCATTGACTGCAGTAGCGGCAAGCTCCCC TCTCAATGCCCCAACCACAGCTTCTGCTATTTCAATAGCCACACCTTCCTGGTCATCATTTCCAAAAGGTTATAAAACAT CAGTGACAAGTGAAAAAAATGTAAAGCTCATAGTCATAACCAATTGCTTCAAGTAACTTACCTGAGCTTCCATGGTACTG GCACCAAGATGAGGTGTTGCAGTAACTTGCTCATGAAGAACCAACTTGCTGTCTTTTGCTGGTGGCTCCTCAGTGAAAAC ATCAAGAGCCGCCTGAAACAAAGAGACACAAAGCTATCATTAATTATTCCTTATGTAGGGAGAGACCCAATTGATTAATT ATTTACCTCTAAAGTCAACTATTAGTGCTTCAAATTTCAAAATAAGAGATGAGAGACAAGAACCTGAGCTACAATTCCTG AGTCCAAAGCCCTAACAAGAGCATCCTCATCGATGACCCCTCCACGAGCAACGTTCACAATTCGAACTCCTTTCTTCATC TTGGCAAAAGTCTCATCATTGAGCATCTTTGAAGTAGCAGGAGTAAGAGGCATATGCAGAGAAATGAAATCCGCAGAGGC AAGGGCCTCATCAAAGCTCACAAGCTCCACACCAATAGCACGAGCACGATCCGCAGGGGCATAAGGATCATGTGCAATGA CATTCATACCAAGCCCCTTGGCACGACGAGCAACCTCAGTGCCAACCTTCCCAAATCCCAACACAGCTAGTGTCTTCCCA ACCATGGACACTCCAACATACTTGCTTCTCTGCCATTTCCCTGCATTAAACAACCACCATGAGGCAAATCAATAACAGAA TCCGCACCAACAACACAACCAAAACAAAAACAGCATCAAAAGAACAATAAACTACAACCTTATATTCAACACAAGTACAA AAAGAGTGAGCCACACACAAATGTATATATCAGGAAAAGAAAAGTCACCCTTTACACAGGAAATATTAATTCAAAGATTT GGTTCCAGAAAGAGAAGATTCATCAAAATGACGTTTCAAGTCAATACATGGGTACATCAAACACGATAAATCCAAACGAA TCCAAACAAGCAAACAAACAAAGGACTCAAATGTAAAGCAAATCAACCATGGTACAACAGTAACACGATCTAACAAGCAA AGAAGGTGCTCGACAAAATGAGTGAACATACCAGCTTTAACAGAGGCATCAGCTTGAGCAACGTTCCTGGCCATGGCGGC GAGGAGGGCAATACCGTGCTCAGCGGCAGCAACAGTGTTGGCGGTGGGGGCATTGACAACCAAACATCCATGCTCAGTGG CGGCGGCGAGATCCACGTTGTCGATTCCGACGCCAGCTCTTCCAACGACCTTGAGCCTACCAGCGGAGGATTCAAACACC TCGCGATTGACCTTGGTGCCACTGCGGACGATTAAGGCGTCGCAGAGGGAGATCTTGGTGCAGAGCTCCTCAGGGGTGAG ATTGTAGGAGCAGTCGACGTTGGCGAAGTCCTTGAGGAGTTTGAGACCCGCTTCGCCGAGCTTCTCGGCGACGAGGACGG TGGGTTTGGCGTCGAGGGAGGCGGAGACGAGGACGACGAGGGGGCGGGAACGGTGGCCGTGGCGGCGGAGGGAGACGGAG AAGGCGGAGGAGAGTGGGAGTTTTGATGAGAGAGAAAGTGAGGGAGAGGGGAGTCGGAGGGTTTTGGAAGCTACTGCGGT GGTTCCGGCGGCCATGTTTGGAAGTGAGTATAGGAGTAGTCGCAAGTTTTCAAAGGGAAGTAAAAGAGAGTGGGTTGGTG ATTGTCTTATAAAGAATGAATGAAACCTCTCACATCAAAGGGTTTATCAATCAACCTTTCA
CDS sequence (LotjaGi5g1v0327900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCGCTTTCAATCGGGACACACTTGTCCAACTTTCAACATCTGCGGAATCCTAGAATTCCACTTCATGGTCT TTGCCCTGTTGATTATTCGCCGTCATCTCAATCTCAACCCCTTTTTGCTGGAATCAGATTTCGAGCTTCCTCTCCCAGGT TGCTTCGTACTGTTGTATTGGCACGCGCAGAAGATAAGGCTAGAGCTCCTACACCTTCTTCGTTTCAGTCTCAGCAAAAT TCCCAGGAACAGTTCCAGGACATGACGTCAGAATCTGGAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGA AGATTTTGAAGGCAACTACCAGCCTAAGACTGATTTGCTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTG TGGCAATTAACCATTCTTGGGTGGCAGCTAATCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATC ATATTTGAAGAATCTCTAGCGTTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTAT TGGGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGCGGAAGTCAGCGAAATAGTGTTTTTCTTGC TTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGCTAGTTACTGACAATATAAAAACCCGAAAC CCACGCCTTCTGCTCTGGGTGGTTGGATTTGTTACATTTTTTCTCAGTTCAATTCTAGACAACCTGACATCCACCATAGT CATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGGTGTTGTTGTAATAGCAGCAA ATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTATGGATACATGGTCAAATATCTACATTACCA ACAATGAAGGATTTATTTATACCTTCAGCCATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGTGAAGTTAG TGGGAAGGGCAGTGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTT TAGGAGCTTTGATTTTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTGGT GTGCTTTGGATCCTCACTGATGCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCAAG GATAGACACTCAAGGAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGTCTGGAGGCAGCGGGGATTCTTCGAG AAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGAACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATAATA GACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATGACGTCACTGCTTTCCCTCAAGATTCTGAGTTCTGGCAATT AGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGAATGGAAA AGGTGGACTTCTTTTGGTACTTTCGAAAGATTAGTGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTA GCGTTTCATAACCTCAACGTTTCTCTACCGACAACTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAA
Protein sequence (LotjaGi5g1v0327900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSLSIGTHLSNFQHLRNPRIPLHGLCPVDYSPSSQSQPLFAGIRFRASSPRLLRTVVLARAEDKARAPTPSSFQSQQN SQEQFQDMTSESGNCDPLCSVDETSSEDFEGNYQPKTDLLKAVAILAAAATGAVAINHSWVAANQDLAMALLFVIGYAGI IFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIKTRN PRLLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLP TMKDLFIPSAISLAVPLALMSLTSEVSGKGSDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPFMGMLLGLG VLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPNSELIASAIGVISAII DNVPLVAAAMGMYDVTAFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYATGIAAYL AFHNLNVSLPTTLAEVPFLSGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 118 | 118 | - | – | |
| PANTHER | 51 | 582 | 532 | 0.0 | – | |
| PANTHER | 51 | 582 | 532 | 0.0 | – | |
| MobiDBLite | 69 | 94 | 26 | - | – | |
| MobiDBLite | 70 | 94 | 25 | - | – | |
| TMHMM | 119 | 141 | 23 | - | – | |
| Phobius | 119 | 141 | 23 | - | – | |
| Phobius | 142 | 146 | 5 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 147 | 168 | 22 | - | – | |
| Pfam | 158 | 513 | 356 | 8.0E-27 | ||
| Phobius | 169 | 205 | 37 | - | – | |
| Phobius | 206 | 223 | 18 | - | – | |
| Phobius | 224 | 242 | 19 | - | – | |
| Phobius | 243 | 272 | 30 | - | – | |
| TMHMM | 247 | 269 | 23 | - | – | |
| Phobius | 273 | 283 | 11 | - | – | |
| TMHMM | 284 | 303 | 20 | - | – | |
| Phobius | 284 | 302 | 19 | - | – | |
| Phobius | 303 | 324 | 22 | - | – | |
| Phobius | 325 | 347 | 23 | - | – | |
| Phobius | 348 | 367 | 20 | - | – | |
| Phobius | 368 | 386 | 19 | - | – | |
| TMHMM | 368 | 390 | 23 | - | – | |
| Phobius | 387 | 391 | 5 | - | – | |
| Phobius | 392 | 412 | 21 | - | – | |
| Phobius | 413 | 432 | 20 | - | – | |
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 433 | 452 | 20 | - | – | |
| Phobius | 453 | 471 | 19 | - | – | |
| TMHMM | 468 | 490 | 23 | - | – | |
| Phobius | 472 | 495 | 24 | - | – | |
| Phobius | 496 | 506 | 11 | - | – | |
| TMHMM | 505 | 527 | 23 | - | – | |
| Phobius | 507 | 532 | 26 | - | – | |
| Phobius | 533 | 543 | 11 | - | – | |
| TMHMM | 540 | 562 | 23 | - | – | |
| Phobius | 544 | 562 | 19 | - | – | |
| Phobius | 563 | 582 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0327900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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