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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0327900 |
| Transcript ID | LotjaGi5g1v0327900.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Na+/H+ antiporter; TAIR: AT3G19490.1 sodium:hydrogen antiporter 1; Swiss-Prot: sp|Q9LT68|NHD1_ARATH Sodium/proton antiporter 1; TrEMBL-Plants: tr|A0A0R0I687|A0A0R0I687_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0327900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64511680..64517090) extracted from Lotus japonicus Gifu genome v1.2.
CCATTTAAGATTCTAAATTTGTGATAAAATGACTGAATTCAAGCATTTTATTTGGAATAAGCTTCTTAACATTCATTCAT GTTATGATTTTTGTCACGGGGTTAACTCTACTTCGTCGCTGTAATGTTTAACTGATGAGAAATGCTATGAATGTGAGTAA AATGAATCTGCTTCTCGTGTGCTGATGCTCACACTGCGAATAACTTTGAAATTGGTCTCAGGACATGACGTCAGAATCTG GAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCAGCCTAAGACTGATTTG CTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGGTGGCAGCTAATCAGGT CCGTCAAAGTCTTTTGCCTGATTTCACTTACAATAAAGGGCATGCATTTGGTGAAACATATCTAGATCTGCTCGATTCTA ATAGTTTTATTTTTATATCACATCTCATTGCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCAT ATTTGAAGAATCTCTAGCGTTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTATTG GGGTAAATTTCTATCCCTTCGCGCTTTGGCTTTTGAGAATGTTGGTTAATTTCTGATTAGTCAGAACTTTATGTGTTCAT TGTTATTTGTCATGCTTTCAAGATTTAAGTTGCTGTTTGTGTGACATATACAGCATCTTTTCACATTGACACGCACTTGA CACATATTTTCCAATATGCATATCTACAAGTTATAATTGAACAAGAGATGCCCTTATCTGGCATTCAATTCTTTCAATGC ACCAGCCAGACTACTCTTCTCAGTGCTCAATGCTGTCAAAAACAAGTATCTAATACCAATAGTCATATATGTACTAGCAC TGCTCTTGTTTTCTTTTTTTTCCTTGGGGGTTTGCTTACTTAGTCATCTTTGCAGAACATAAGGAGCCGCAAACAGGGAT TAGAATAAGGACACCTTCTATGTACCTTTTTCCATTGTGTACACACTTATGCCCTTTTCATCTCCCCAACCTTTAGTTGA AGCACAATTTAATGTTTGAACCAACATTAACTACAAGGAAATAATATTTTGGGTTTGATCTCGTATCTGTACGGAACTTG TGATTTGGAATGTTTTCTTGTACTGTCCAATATGAACTTGATGCAAAAATAAGAGTTGCTTTTGTCGCCTCTTTGTATTT ATTTAATAAGGGCCTGGTATGGTTATCAAAATATTACTACCTGTGCTTGGAACAGATCAAATTTCTTTGGCTGAACCATT CGAAAATCAAGAGAGAATTGTAACGCTTGATGGTATTTCTTGACCCAAGGAATTTTAGTTAATTTTTTTCAAACTGCACA AGAGGTTACCTTGAAGATTATGTGCTTTTTATATGTGGTTAATTTTTTTTCAACAATTGATATCTACCCATGCACATGTT ATATTGTTATAAAATAAGAAGCAACTTTTACAATTGACATAATGGCAACTAGGCGGCTCCTGATCCCTCTTGTGTCTCCC TAGTATCTGTATCCCTGAACACATCCACTTGATAATTGTTCATCAGCTGATCAGTTAGGTACTTAGGTACACATACTTAA TGTTGGGAACCACTTTGGCACAACACTTAACAGATGCAAGTTGGCTTTAAATATACCCCATTGTCTTTTCTTTGCACATC TCCATTCACTGCTCAGATTGTATGTCTATATTTTGAAGTCAGTTTTTCTCCCCCACTCTTCTGATTGGATCTTCTACTGG TATTTTCTTTTGTATTTTATGAATTGTCTATAGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGC GGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGC TAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTGCTCTGGGTGGTAAGTGCCTTACTGCTTCGTCTCTGCATC GTTGACCAAGCTAAGTAAACTACGTATCAGACAATTTGTGAAATGAAACTTCTTGGAAATTTGACTACATTAGTTGTTGA ACATTATAGTTTATGGTCAAGTTGTGTACATAGAGGCTGTAGTACCATTTAGAACACAAAGGGCTCGAATTTCAAGAGTC CCTTCTTTCAAATAAGTACGGCACACATTTCAATATTTGATACTTAAAAATGTTGATATTTAAAAGAATAAAAGATATCA TAAACAAAACAAAAGAGTGTACTAGACCATGCTCCCCCCAACCCCAGAATCCTGAATTTTAAATCTTCTGTTTGCTTCAC TAGTTTTCTTTCGTCTCAGCAATGGAAGTTGACAAATTAAGATTGAATTTGCAGGTTGGATTTGTTACATTTTTTCTCAG TTCAATTCTAGACAACCTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAA AGTATGTGTTTGTTATGTTAGCTCAGTGTAATGTTTTCCCCATGTGTTGTATCATGTTGTAGTGTTAGATTGACCATATT TTACTAAAATACCACATTAATAAGATTGACTGGAGATATAGATGCATCACCTAAAGTTTCAGTCACTGGACCTCTGTAGA TGCTATGACTGGTCCATACCTGTAGGCTCTGGCAAATTTATATTGCATTACCCTTGTTTGCTTTTTCATTCTTTTAAGAA ATCTGAACACTCATTTGAGAGATCTTTACTAATTTTCCTCCAGAGATGAATTTCATTCACATTAATTTACCCGTTCCTGC TAGTGCTTTTTATTCATAGATGAGATCAAATGTTATTCGCTTTTCCATTTTAGTTGAAATCAGCATTAATGATGGATTTC TTGATTTTTGTTGTGGGCATAAACATTCAGAGTGTGTGGGTCAATCTTCTAAATTTGCTGTTTACAATATTCGCCAATCA CCAACTATTCTAAGGTTTGGCTATACCTTATCAAATCATCAAGAAATTTCTTTGGATTCTATTGACAGGATTCTTGGAGG TGTTGTTGTAATAGCAGCAAATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTATGGATACATG GTCAAATATCTACATTACCAACAATGAAGGTTATCTCATGGAAAAATTATTCCAATATGATATGTCTTTTTGGATCGTGG GATTTTCTTTCCTGCAACTACATAATAAATTATAGTGGTGAAATGAATTTAGCACGACATACTGAAATATTCTTTGGATA TAATGATTAGAAATATATAATTTAGGCCCTAAATTAAGATTTCCTTGGTCACAGTCTTTCTGTTACTTAGATTCAATTGC ATGAACAGTCTGATTCAATCTCGTGCAATGAAGAACTAACAAGTATCCATAATTTCATTTTTTCGTTATTTACAGGATTT ATTTATACCTTCAGCCATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGGTACTCTTCTTGCACTGCAGAAG GCTGATTTGAAAAGTGAGATTTAGCTTAACATATTACAATTTAGATGATGTTGGTTTTTCTCCATCTGTTCAGTGAAGTT AGTGGGAAGGGCAGTGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGG TTTAGGAGCTTTGATTTTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTG GTGTGCTTTGGATCCTCACTGATGCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCA AGGATAGACACTCAAGGAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGGTAATAAGGAAAGGAAATGTATTT TACTTTTTTCTAATGCAGGGAAGCTTTGGATGATAGCCATATGTTCCATCTATTTTGAACTTAGGAGGGTACTTGCCATG ACTTATTTGGTTTTATTCCAATGTAGTTATTTCATTCTGAAAAGATAATATGTTACCTGATTCTCTTGTCCTACTATGAG GATGTTCCTCTTCATATCCGGTGAAAAGTCCTACATTGACCAGAGATATGGTCAAATAAGTCCATATAAAGGGAAGAACA ACTCTCAACTGTTAGCTAGGTTTTCTAAGATGGTATCAAAGCCTATACTAGATCCGTTTATTGGGTCACCCTCAGATGTC TTGTCCTCTGCAAATTCAACGCTCCAGATACCTCTTGGCAGCAGAGGTGTGTTGTGAAGTATCACATTGACTAGAGGTAT AATCAAATAAGTCTCCATAAAGGGAAGAACAACCCCCCTCCTAGCCCAGGGTTACGCCTTGCCTGAATTCTAAGAACATG AATACCTGTCTTTTGGGATATCATTACTTACAGAATACAGCTAAATGAGTTTCAAGTTCAAGCATTCTTTTGCATGCATT GTGATTGCATATTCTTCCCTCATATAAATTTCAATGTCTTAAGTCCTAACTACACTTGTTGTATTTGATCAATTTTAATG GTCATGTTCTGCAGTCTGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGA ACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATG ACGTCACTGCTTTCCCTCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTT ATTGGCTCAGCTGCTGGAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACTTTCGAAAGGTATTCCCTAC TGTACACTTAGGCTGCATTTGGAGTGGAGAGTTTGTTTGAGTTTATTTAATAGTATAAAAATAGCTTATCACCTACCTAT AAGCTGTTTTTAGTTTATTTTCATAAGTTTCTCATATTAGCTTTTGAATGAGTTCTTATAACTACTTCTTAAGTTATTTT GAACTAATTCAATAAGTTTTTCAAATAAGCTAATGAAAGCACTTATGTGATGAGTGTGTATTGCTATAAGTGTTTAATTA AGTTTTTTACCCAACGTATTATTGAACATGTTGATGTTATGAAATGTTTGTGCATATTTCATAACAGAATTCATTTATCT CGTTTGTGCAGATTAGTGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAAC GTTTCTCTACCGACAACTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAA
CDS sequence (LotjaGi5g1v0327900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGTCAGAATCTGGAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCA GCCTAAGACTGATTTGCTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGG TGGCAGCTAATCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCG TTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTATTGGGGCTCCGTCAACGGATAT AGCTGTTTCAGAGCTAACACATGCATCTGCGGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTG AGATAGTTGATGCTCATCAAGGATTCAAGCTAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTGCTCTGGGTG GTTGGATTTGTTACATTTTTTCTCAGTTCAATTCTAGACAACCTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAA ATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGGTGTTGTTGTAATAGCAGCAAATGCTGGAGGTGCATGGACTC CTATTGGTGATGTTACTACTACCATGCTATGGATACATGGTCAAATATCTACATTACCAACAATGAAGGATTTATTTATA CCTTCAGCCATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGTGAAGTTAGTGGGAAGGGCAGTGATTCTCC CAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGAGCTTTGATTTTTGTCC CAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTGGTGTGCTTTGGATCCTCACTGAT GCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCAAGGATAGACACTCAAGGAGCACT GTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGTCTGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATT CTCATGTCCCGAATAGCGAACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCT GCAGCAATGGGAATGTATGACGTCACTGCTTTCCCTCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTAC TGGTGGATCCATGTTGGTTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACT TTCGAAAGATTAGTGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAACGTT TCTCTACCGACAACTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAA
Protein sequence (LotjaGi5g1v0327900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSESGNCDPLCSVDETSSEDFEGNYQPKTDLLKAVAILAAAATGAVAINHSWVAANQDLAMALLFVIGYAGIIFEESLA FNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIKTRNPRLLLWV VGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLFI PSAISLAVPLALMSLTSEVSGKGSDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPFMGMLLGLGVLWILTD AIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPNSELIASAIGVISAIIDNVPLVA AAMGMYDVTAFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYATGIAAYLAFHNLNV SLPTTLAEVPFLSGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 2 | 495 | 494 | 0.0 | – | |
| PANTHER | 2 | 495 | 494 | 0.0 | – | |
| Phobius | 32 | 49 | 18 | - | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| Phobius | 50 | 60 | 11 | - | – | |
| Phobius | 61 | 81 | 21 | - | – | |
| TMHMM | 61 | 80 | 20 | - | – | |
| Pfam | 71 | 426 | 356 | 5.6E-27 | ||
| Phobius | 82 | 86 | 5 | - | – | |
| Phobius | 87 | 107 | 21 | - | – | |
| Phobius | 108 | 118 | 11 | - | – | |
| Phobius | 119 | 136 | 18 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 185 | 30 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 186 | 196 | 11 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 197 | 215 | 19 | - | – | |
| Phobius | 216 | 237 | 22 | - | – | |
| Phobius | 238 | 260 | 23 | - | – | |
| TMHMM | 239 | 261 | 23 | - | – | |
| Phobius | 261 | 280 | 20 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Phobius | 281 | 299 | 19 | - | – | |
| Phobius | 300 | 304 | 5 | - | – | |
| Phobius | 305 | 325 | 21 | - | – | |
| Phobius | 326 | 345 | 20 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| Phobius | 346 | 365 | 20 | - | – | |
| Phobius | 366 | 384 | 19 | - | – | |
| TMHMM | 381 | 403 | 23 | - | – | |
| Phobius | 385 | 408 | 24 | - | – | |
| Phobius | 409 | 419 | 11 | - | – | |
| TMHMM | 418 | 440 | 23 | - | – | |
| Phobius | 420 | 445 | 26 | - | – | |
| Phobius | 446 | 456 | 11 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 457 | 475 | 19 | - | – | |
| Phobius | 476 | 495 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0327900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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