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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0327900 |
| Transcript ID | LotjaGi5g1v0327900.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Na+/H+ antiporter; TAIR: AT3G19490.1 sodium:hydrogen antiporter 1; Swiss-Prot: sp|Q9LT68|NHD1_ARATH Sodium/proton antiporter 1; TrEMBL-Plants: tr|A0A0R0I687|A0A0R0I687_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0327900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64511680..64517090) extracted from Lotus japonicus Gifu genome v1.2.
CCATTTAAGATTCTAAATTTGTGATAAAATGACTGAATTCAAGCATTTTATTTGGAATAAGCTTCTTAACATTCATTCAT GTTATGATTTTTGTCACGGGGTTAACTCTACTTCGTCGCTGTAATGTTTAACTGATGAGAAATGCTATGAATGTGAGTAA AATGAATCTGCTTCTCGTGTGCTGATGCTCACACTGCGAATAACTTTGAAATTGGTCTCAGGACATGACGTCAGAATCTG GAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCAGCCTAAGACTGATTTG CTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGGTGGCAGCTAATCAGGT CCGTCAAAGTCTTTTGCCTGATTTCACTTACAATAAAGGGCATGCATTTGGTGAAACATATCTAGATCTGCTCGATTCTA ATAGTTTTATTTTTATATCACATCTCATTGCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCAT ATTTGAAGAATCTCTAGCGTTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTATTG GGGTAAATTTCTATCCCTTCGCGCTTTGGCTTTTGAGAATGTTGGTTAATTTCTGATTAGTCAGAACTTTATGTGTTCAT TGTTATTTGTCATGCTTTCAAGATTTAAGTTGCTGTTTGTGTGACATATACAGCATCTTTTCACATTGACACGCACTTGA CACATATTTTCCAATATGCATATCTACAAGTTATAATTGAACAAGAGATGCCCTTATCTGGCATTCAATTCTTTCAATGC ACCAGCCAGACTACTCTTCTCAGTGCTCAATGCTGTCAAAAACAAGTATCTAATACCAATAGTCATATATGTACTAGCAC TGCTCTTGTTTTCTTTTTTTTCCTTGGGGGTTTGCTTACTTAGTCATCTTTGCAGAACATAAGGAGCCGCAAACAGGGAT TAGAATAAGGACACCTTCTATGTACCTTTTTCCATTGTGTACACACTTATGCCCTTTTCATCTCCCCAACCTTTAGTTGA AGCACAATTTAATGTTTGAACCAACATTAACTACAAGGAAATAATATTTTGGGTTTGATCTCGTATCTGTACGGAACTTG TGATTTGGAATGTTTTCTTGTACTGTCCAATATGAACTTGATGCAAAAATAAGAGTTGCTTTTGTCGCCTCTTTGTATTT ATTTAATAAGGGCCTGGTATGGTTATCAAAATATTACTACCTGTGCTTGGAACAGATCAAATTTCTTTGGCTGAACCATT CGAAAATCAAGAGAGAATTGTAACGCTTGATGGTATTTCTTGACCCAAGGAATTTTAGTTAATTTTTTTCAAACTGCACA AGAGGTTACCTTGAAGATTATGTGCTTTTTATATGTGGTTAATTTTTTTTCAACAATTGATATCTACCCATGCACATGTT ATATTGTTATAAAATAAGAAGCAACTTTTACAATTGACATAATGGCAACTAGGCGGCTCCTGATCCCTCTTGTGTCTCCC TAGTATCTGTATCCCTGAACACATCCACTTGATAATTGTTCATCAGCTGATCAGTTAGGTACTTAGGTACACATACTTAA TGTTGGGAACCACTTTGGCACAACACTTAACAGATGCAAGTTGGCTTTAAATATACCCCATTGTCTTTTCTTTGCACATC TCCATTCACTGCTCAGATTGTATGTCTATATTTTGAAGTCAGTTTTTCTCCCCCACTCTTCTGATTGGATCTTCTACTGG TATTTTCTTTTGTATTTTATGAATTGTCTATAGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGC GGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGC TAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTGCTCTGGGTGGTAAGTGCCTTACTGCTTCGTCTCTGCATC GTTGACCAAGCTAAGTAAACTACGTATCAGACAATTTGTGAAATGAAACTTCTTGGAAATTTGACTACATTAGTTGTTGA ACATTATAGTTTATGGTCAAGTTGTGTACATAGAGGCTGTAGTACCATTTAGAACACAAAGGGCTCGAATTTCAAGAGTC CCTTCTTTCAAATAAGTACGGCACACATTTCAATATTTGATACTTAAAAATGTTGATATTTAAAAGAATAAAAGATATCA TAAACAAAACAAAAGAGTGTACTAGACCATGCTCCCCCCAACCCCAGAATCCTGAATTTTAAATCTTCTGTTTGCTTCAC TAGTTTTCTTTCGTCTCAGCAATGGAAGTTGACAAATTAAGATTGAATTTGCAGGTTGGATTTGTTACATTTTTTCTCAG TTCAATTCTAGACAACCTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAA AGTATGTGTTTGTTATGTTAGCTCAGTGTAATGTTTTCCCCATGTGTTGTATCATGTTGTAGTGTTAGATTGACCATATT TTACTAAAATACCACATTAATAAGATTGACTGGAGATATAGATGCATCACCTAAAGTTTCAGTCACTGGACCTCTGTAGA TGCTATGACTGGTCCATACCTGTAGGCTCTGGCAAATTTATATTGCATTACCCTTGTTTGCTTTTTCATTCTTTTAAGAA ATCTGAACACTCATTTGAGAGATCTTTACTAATTTTCCTCCAGAGATGAATTTCATTCACATTAATTTACCCGTTCCTGC TAGTGCTTTTTATTCATAGATGAGATCAAATGTTATTCGCTTTTCCATTTTAGTTGAAATCAGCATTAATGATGGATTTC TTGATTTTTGTTGTGGGCATAAACATTCAGAGTGTGTGGGTCAATCTTCTAAATTTGCTGTTTACAATATTCGCCAATCA CCAACTATTCTAAGGTTTGGCTATACCTTATCAAATCATCAAGAAATTTCTTTGGATTCTATTGACAGGATTCTTGGAGG TGTTGTTGTAATAGCAGCAAATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTATGGATACATG GTCAAATATCTACATTACCAACAATGAAGGTTATCTCATGGAAAAATTATTCCAATATGATATGTCTTTTTGGATCGTGG GATTTTCTTTCCTGCAACTACATAATAAATTATAGTGGTGAAATGAATTTAGCACGACATACTGAAATATTCTTTGGATA TAATGATTAGAAATATATAATTTAGGCCCTAAATTAAGATTTCCTTGGTCACAGTCTTTCTGTTACTTAGATTCAATTGC ATGAACAGTCTGATTCAATCTCGTGCAATGAAGAACTAACAAGTATCCATAATTTCATTTTTTCGTTATTTACAGGATTT ATTTATACCTTCAGCCATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGGTACTCTTCTTGCACTGCAGAAG GCTGATTTGAAAAGTGAGATTTAGCTTAACATATTACAATTTAGATGATGTTGGTTTTTCTCCATCTGTTCAGTGAAGTT AGTGGGAAGGGCAGTGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGG TTTAGGAGCTTTGATTTTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTG GTGTGCTTTGGATCCTCACTGATGCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCA AGGATAGACACTCAAGGAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGGTAATAAGGAAAGGAAATGTATTT TACTTTTTTCTAATGCAGGGAAGCTTTGGATGATAGCCATATGTTCCATCTATTTTGAACTTAGGAGGGTACTTGCCATG ACTTATTTGGTTTTATTCCAATGTAGTTATTTCATTCTGAAAAGATAATATGTTACCTGATTCTCTTGTCCTACTATGAG GATGTTCCTCTTCATATCCGGTGAAAAGTCCTACATTGACCAGAGATATGGTCAAATAAGTCCATATAAAGGGAAGAACA ACTCTCAACTGTTAGCTAGGTTTTCTAAGATGGTATCAAAGCCTATACTAGATCCGTTTATTGGGTCACCCTCAGATGTC TTGTCCTCTGCAAATTCAACGCTCCAGATACCTCTTGGCAGCAGAGGTGTGTTGTGAAGTATCACATTGACTAGAGGTAT AATCAAATAAGTCTCCATAAAGGGAAGAACAACCCCCCTCCTAGCCCAGGGTTACGCCTTGCCTGAATTCTAAGAACATG AATACCTGTCTTTTGGGATATCATTACTTACAGAATACAGCTAAATGAGTTTCAAGTTCAAGCATTCTTTTGCATGCATT GTGATTGCATATTCTTCCCTCATATAAATTTCAATGTCTTAAGTCCTAACTACACTTGTTGTATTTGATCAATTTTAATG GTCATGTTCTGCAGTCTGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGA ACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATG ACGTCACTGCTTTCCCTCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTT ATTGGCTCAGCTGCTGGAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACTTTCGAAAGGTATTCCCTAC TGTACACTTAGGCTGCATTTGGAGTGGAGAGTTTGTTTGAGTTTATTTAATAGTATAAAAATAGCTTATCACCTACCTAT AAGCTGTTTTTAGTTTATTTTCATAAGTTTCTCATATTAGCTTTTGAATGAGTTCTTATAACTACTTCTTAAGTTATTTT GAACTAATTCAATAAGTTTTTCAAATAAGCTAATGAAAGCACTTATGTGATGAGTGTGTATTGCTATAAGTGTTTAATTA AGTTTTTTACCCAACGTATTATTGAACATGTTGATGTTATGAAATGTTTGTGCATATTTCATAACAGAATTCATTTATCT CGTTTGTGCAGATTAGTGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAAC GTTTCTCTACCGACAACTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAA
CDS sequence (LotjaGi5g1v0327900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGTCAGAATCTGGAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCA GCCTAAGACTGATTTGCTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGG TGGCAGCTAATCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCG TTTAATAAAAGCGGAGTGGGATTGTTGATGGCGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGC GGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGC TAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTGCTCTGGGTGGTTGGATTTGTTACATTTTTTCTCAGTTCA ATTCTAGACAACCTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGAT TCTTGGAGGTGTTGTTGTAATAGCAGCAAATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTAT GGATACATGGTCAAATATCTACATTACCAACAATGAAGGATTTATTTATACCTTCAGCCATTTCCCTTGCTGTTCCCCTG GCTCTAATGTCCCTGACTAGTGAAGTTAGTGGGAAGGGCAGTGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCC TCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGAGCTTTGATTTTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTC CGTTCATGGGGATGCTGCTTGGTCTTGGTGTGCTTTGGATCCTCACTGATGCTATCCATTACGGCGAATCGGAAAGGCAG AAGCTAAAAGTTCCACAGGCTCTGTCAAGGATAGACACTCAAGGAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAG CAGTCTGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGAACTGATTGCAA GTGCTATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATGACGTCACTGCT TTCCCTCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTTATTGGCTCAGC TGCTGGAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACTTTCGAAAGATTAGTGGCTTTGCTTTTGCTG GTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAACGTTTCTCTACCGACAACTCTAGCCGAAGTTCCT TTCCTTTCTGGTTCATAA
Protein sequence (LotjaGi5g1v0327900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSESGNCDPLCSVDETSSEDFEGNYQPKTDLLKAVAILAAAATGAVAINHSWVAANQDLAMALLFVIGYAGIIFEESLA FNKSGVGLLMAAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIKTRNPRLLLWVVGFVTFFLSS ILDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLFIPSAISLAVPL ALMSLTSEVSGKGSDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPFMGMLLGLGVLWILTDAIHYGESERQ KLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPNSELIASAIGVISAIIDNVPLVAAAMGMYDVTA FPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYATGIAAYLAFHNLNVSLPTTLAEVP FLSGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 2 | 485 | 484 | 2.2E-297 | – | |
| PANTHER | 2 | 485 | 484 | 2.2E-297 | – | |
| Phobius | 32 | 54 | 23 | - | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| Phobius | 55 | 59 | 5 | - | – | |
| Phobius | 60 | 81 | 22 | - | – | |
| TMHMM | 61 | 80 | 20 | - | – | |
| Pfam | 73 | 416 | 344 | 5.9E-27 | ||
| Phobius | 82 | 101 | 20 | - | – | |
| Phobius | 102 | 126 | 25 | - | – | |
| Phobius | 127 | 145 | 19 | - | – | |
| Phobius | 146 | 175 | 30 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 176 | 186 | 11 | - | – | |
| Phobius | 187 | 205 | 19 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 206 | 227 | 22 | - | – | |
| Phobius | 228 | 250 | 23 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 251 | 270 | 20 | - | – | |
| Phobius | 271 | 289 | 19 | - | – | |
| TMHMM | 271 | 293 | 23 | - | – | |
| Phobius | 290 | 294 | 5 | - | – | |
| Phobius | 295 | 315 | 21 | - | – | |
| Phobius | 316 | 335 | 20 | - | – | |
| Phobius | 336 | 355 | 20 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 356 | 374 | 19 | - | – | |
| TMHMM | 371 | 393 | 23 | - | – | |
| Phobius | 375 | 398 | 24 | - | – | |
| Phobius | 399 | 409 | 11 | - | – | |
| TMHMM | 408 | 430 | 23 | - | – | |
| Phobius | 410 | 435 | 26 | - | – | |
| Phobius | 436 | 446 | 11 | - | – | |
| TMHMM | 443 | 465 | 23 | - | – | |
| Phobius | 447 | 465 | 19 | - | – | |
| Phobius | 466 | 485 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0327900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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