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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0328100 |
| Transcript ID | LotjaGi5g1v0328100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stress enhanced protein 1, chloroplastic; TAIR: AT4G34190.1 stress enhanced protein 1; Swiss-Prot: sp|Q9M7I9|STEP1_ARATH Stress enhanced protein 1, chloroplastic; TrEMBL-Plants: tr|I3S7G8|I3S7G8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0328100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64519782..64525172) extracted from Lotus japonicus Gifu genome v1.2.
CACACAACTCAAGTTTGGGAGGTCAATGATATGGTATCCCAAAAGCTTAAAAAAAAAATAATACTCACAAGGCCACTAAC TAAAATAAAATTAGTATCTTGGGCCTTCTGCCCTCCCATTAACAAAAAAACATATATAGTATCTACCAAAATGTTGTGTA ACAAAATGAAAAACACTCAAGAGGCCACGTGTGCATTTTCCGAATCTAAGGTTGAAAGAATGGTGATGGTGTTATGTGTC ACCGCGTGTCCAAGAGCAAAGAGATAAAGAATATAGAGGATTGCAAACCTGTTGGCACCGCACAACAAAAACCATGGCAC TTGCAACTCAAACCTCTGCATCTCTTTCTATCTCTTTTCGTGGTAAGCTTACTCACTCTCTTATCTCTTTGTTTCTTCCA TGACTAGTTCCAATGTCTAACACTCAACTATTGAACTGTGCTGTGTTGCAGATGCTTGTGTTTTCCCTGCTGCAAAATAC TCTGCCACTGCTCGCTTTCCTCTACCAAATTTGGTTCCTTCTAGAGCATCCTTCGCCACTGGTACCCCACTATGTAAGTT ATCTCTAGTCTCTAGCTGCTGTCATTACTTCTTCTTATCAGATTCTAACTTATAAGCTGGAATTTGCATTCAGAATCCTT TCTGCATTTAATTTAAAGAAAATTGAATGCTCAGGTAACTTAGCAATCTTGGGTTCATCCTAATTTTTTCTGATATTTTG TTTTAGAAAGGAAAAAAAAAATCATCATTTAGTTGGAAATCGAAATTAAGTAGAACTTCTGAACTGATTAACTTCTAAAG AAGGCAATATTATGCTGGCTTCAAGTGGATTGAAAAAGTGTTAGCATGAGGATTGCTATAGACTACAGCTTCCTTTCTTT AGTACTTGGTTGTTGGTACTTCTTTTGCATACTAAAGTTAGTTATAGCTCCAACAAATACAAGCTCCACACTCAAAATCT GGTATTTTCTGTTACAAAATCTGGTATAAAGTAAATGAACATATTGCAATAGAATGAGGCAATGCTATAGATTGTGTTAT TGGAAAATGGCAATGGTATATCAAATATCACCATAAAGTTAGTTAATGATTCATGTCATATTTGATTCATGTATCCGATA CCACTGGTAAGAAAGGGATTTTGTTGTTGTTATATAGTTGGGGTTTGTAGTTGTATCCATAATTCTGTGACGTTTATGAT GCTTTTTCATTTTATGGGTTTGAGGGGAGGACAGAACTAATGTGATGTTGGAATGAGATCATAGTTAACAAGCTAAGTAT TGTTTGATTTGTCCCAAGTGATTCGGAGAAGTCATGGAAGGAAACTTGCGTGCAGAGCAATGCCGGTTTCAATAAGAAGT GAGCAAAGTACCAAGGATGGGAACGGTTTGGATGTGTGGCTAGGGCGGCTAGCGATGATTGGCTTTGCAGCAGGCATCAC TGTTGAAGTTGCTACTGGAAAGGGACTCCTAGAGGTATGAAAATGAAATGATACAATAATTAGTGAGTTAGTTCAGGCAT AGTTTAGACTGCAAGAGTATATCTCCATCTTTTGAGGCATGATATAGTTTATCATTTTCAACAATCGATTAAAGGATTTT GCCTCTTTTATAACCCCTCATCTTCCGAAAGTTCACTTTGATAGTGTAAATTTTCTCTCTCCCTTACTTTGTTGTGTTTA TAAGTAATGACATCTAGTTGTAAAATTAAGATAGTTTTTTTAAGTCATTGGTAAATTAACAGATCTCAATACTTGTTCAT GACCTTTTAAACTAATAAATTTTACAATTAAGCATATACCTTCATAAAACTTTCCAATGCATGTAAACTAAGTGTAATCA TTTCAAGTTTAAAGCTTCCAAGTGAATTCAACTCACTGAATCCTATTTCTCTCGCCCATTCTAGTATTGATTTTTAGCAG AATTTGTTGCAAGAGAATAACAATGTTCCTGTAATTTGATTGTGCAGAACTTTGGAGTCGCATCTCCACTGCCTACAGTT GCACTGGCAGTAACAGCACTCGTGGGTGTCTTGACAGCAGTCTTCATCTTCCAATCAGCCTCAAAGAACTGACAATGTAC TTAGGTTGTGTTTGTTGTAAATTCTGTAATTTTGAGGTTTCATTTTCCATGTAAAACCTTTTTCTTGTAATATTTGTTTT GATGCAAAGAATTGGCTTCAAGGCCTCAAATATTAAAAGCAATGGAAGCCTTAAATCATATTAAATCTTCTCCTTTCCTT GTTAGCCTTATCCAAGCCAATGTTTATCTTCTTGAATTATGATGTATTTGCATTAATTTAGCTGTGAAGGAGTTGGTGCA GGATTTGCAATCTATGCATTGCTTAAATAAATAAAAGTTCACAGTAAAATAAGCTTCTCTGAGCGAGAGAATAAAGGTTA ATAGTGTTTCAAATTAATAACCCTGTTAGTCATATTCCTACCTTTAGTGACTTTCATTACTTTTCTTCATATGAAAAGCC TCTTAGATAAATGTTCATAAAAATGATTCATCATAGGTTTCACGTGATGCTGTGTTGAGAGTAGATATGCTCAGCATCTA GCCACTCTGGATACTGATATAAAAATAAGTGACCAACTACAATGGACATCATGCTTAAGATTGTCATTCATATCTTGAAT AATCTGATTCCTAGAACTAACAAAATTATGGAAACACCTTGAAAAAAGGAGATCATTACAGCAGCCACTTAGAGACCTCA CATATCCATAGACTGTAATCCAGTTGAAGCCTTTGATTTCTTCCTCTTCTTGGATCCATTTTTGTTAACTTTCTTCTTGG GTTGTTTCTCTTCTATCGGTTGTGTGTTCTGCAAGTGTTGATGGAGGATAGCCAATGGATCCGCTTGGAATAAATTATCC TTAAGAACTGCAGACAACCGTTGTCCTTCCTTCAATCTGATGAACAAGTAAAAAAAAGTTACAAATACAATTTTACATGC AAAATTTAATGTTGGCTATAAGGGAAGCACTTACAATAGTTTCTTCCTAGATTTGCAATTTAGTTTAAAGTCATCCTCAC GATCTGATTTCTGTGATGCCTTCAACTCCGGAAGAGACTCTAAGATTGAGGAAAGGTTATATGCCTTCAATTTATTCTGC CGCCTTTGCTGTTTGCTCTTCTTCTGCCACAAGACAAAAACATATTAAAAAAACCAAGAACACTAGTACATTTTGCACAT ATAATTAGAGTGGCATATATTTTCCAAAAGATCTTGATTCAGTCAATAGAATAGACAACAAGCATGTGAACAGAACATTC TCAATAAATATTTGTGGACAAATATTTAAAATACCTATACCTATTAGATACATAACAAAAAGAACTCTTCAGAGTTCAGA CCAAGATATCATCACAAGTTTACTATACTACCGTGGAAGTTGGAACATGAAACTTGTTTTCATTTAAAGGGTAAGAAAAA ACAAAATCTTATGATAATTGGAGACTACAATTAGTTTTAATTCTACCAAGTGTCCTATAATTAAATATTAAACAATAACT TTTAAATTTCCCAATACTAACACGTCAAAGAGTGTACACTATGTTTCCATCAAGATTTACTCATGTGAAGCATTTAACTG CTTCTTAAATGAAAGTGGAAATTGTCCTTGGAATATTTTTGTAAGCAACAAAATTACATGAACACCCAGATTTGAATATC AGAGCAAGCATGTATAATCATTAGGACGAAATAACCTGTCCTGCCTGAAGTTGTGGGACCGTAACAAAGTGAAGAACAAG CAAGGACCAGAAAATTATTCATTATTTAACGTGTCCATCAACAAGATAACATTTTAAAACCAATTGTCCACTAATGATTT GTAATAACCAGCATAATGCAATTGATTAGCCAGTAAATCAAGCCCATTACATAAAATTACTGAAGTTCTTCCACAGTTCA GCCAATTAATCTCAAGAACAGTAATGCCATAGAAATAAGATTCTAACCTTGCTAATAGACTTTTGGGCGCCCAAGGAAGC AACAGTATCTTTCACCTCTGAAATAACAGATGGATTGGAAGGAGTTAAAATCTAGACAGTTTTGACAAGTAATATGCGCC AAGCCACTAGATATTTTATATACACCTAAACAAAACAGATATAAGCCCTAACATAAAACTAACATTTTGACACCTCGACA CTGGCAATTGTTTTCTATTCCTCAATAGATTCAATTGTTCTGTTTTGTATTAAAATTAAGAAGCAACAAGCCTCTGCTTA AAGTGAAGACCAGAAATTTTAATGTTATAATTCAAGACAAAAAACAATGGATCCCAAACGTACTGGAATAAAACTCTAGC TTCTTTTCAAGCTTGCGGTCGGACTTTGAATCAGACCTGCACGGGTTAGGAAGAATTAGAAACACAACCTCAAATTGCAG AAACAACAAGCAATTAGATGAGAAGTAAGATTAACTATTCAGAATTGAAAGCGAAGAGGGAAAACATTAACCTTGTACTT GTCTTGCCCATCGATGATAAAAAGTTAGGGTTTGAGTAGAACCCAATTCCTATATACACGAGTCACGAGGGGTTAGTCTC TCAATGGATATTATATATTAGGTAAATGACAATAAGTAATTGCAGGTGTGAGGGGTTGGAGTGATTAAATCCAAAGCTTC TCCAAACACATCCGAAACTACTAATATATTGGAAATTCTTTTTTCTATTTAAGCTGAACCATGGAGAGATAGCATTCTTA TACTGCACTAATAATGCCCTCCAATCACTAGAAAGCTTAACAGTTAACACAACAACTTCATACTATCAATGCACTCAAAA GCAATCACTCACAGGTAAAAGACACCAAAATTTCAATTATTGTAAAGTACATTCAATTGGGTTTTCACATAACAGCACAG TACAGAATGCAAAAAATGCACTGATCATCACTAGCTACCAAACTGGGAAGAAAATTAAACAGTTCTACAATCGATTGAAT CAAATACAGTCAGAAGCAGGAAAACCTGAATCTAAAGAAATTTTAATCTAAGCTATTGTTCCTGAATTCGTTTCATAAGA ACATGGAGCGTGAAAATTGGGGATTACGAACCAGGAACTCAAACGCAGTGATGAGAGTGGTGTAACCTTGATGTGGAGAA CACGCGTTCTGACGAATACCTTGCCGCCGTCAGAAGATTCGCCGGTGACGACGACGCCGCCTTCTTCGACGGTGACTGAG AAAGAGCAGGATTAGAAGAAAATGTTGCGTTAGGGTTTTCCAGTGAAAATTAAACCATAAAAAAAAGTTGACAAATTGAT CTAATATGAAAACTAATGAAATAAACACTATAATTTTTTAAATTTTATTTATCATTTTTGGCTAAAAAGTATTTTTGGCC CCTGATGTTTCAAGTTTGTGCAAATTCTGCC
CDS sequence (LotjaGi5g1v0328100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTTGCAACTCAAACCTCTGCATCTCTTTCTATCTCTTTTCGTGATGCTTGTGTTTTCCCTGCTGCAAAATACTC TGCCACTGCTCGCTTTCCTCTACCAAATTTGGTTCCTTCTAGAGCATCCTTCGCCACTGGTACCCCACTATTGATTCGGA GAAGTCATGGAAGGAAACTTGCGTGCAGAGCAATGCCGGTTTCAATAAGAAGTGAGCAAAGTACCAAGGATGGGAACGGT TTGGATGTGTGGCTAGGGCGGCTAGCGATGATTGGCTTTGCAGCAGGCATCACTGTTGAAGTTGCTACTGGAAAGGGACT CCTAGAGAACTTTGGAGTCGCATCTCCACTGCCTACAGTTGCACTGGCAGTAACAGCACTCGTGGGTGTCTTGACAGCAG TCTTCATCTTCCAATCAGCCTCAAAGAACTGA
Protein sequence (LotjaGi5g1v0328100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALATQTSASLSISFRDACVFPAAKYSATARFPLPNLVPSRASFATGTPLLIRRSHGRKLACRAMPVSIRSEQSTKDGNG LDVWLGRLAMIGFAAGITVEVATGKGLLENFGVASPLPTVALAVTALVGVLTAVFIFQSASKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 143 | 143 | 2.2E-44 | – | |
| PANTHER | 1 | 143 | 143 | 2.2E-44 | – | |
| Phobius | 1 | 83 | 83 | - | – | |
| SUPERFAMILY | 82 | 127 | 46 | 2.22E-8 | – | |
| TMHMM | 83 | 102 | 20 | - | – | |
| Phobius | 84 | 104 | 21 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| Phobius | 116 | 137 | 22 | - | – | |
| TMHMM | 117 | 139 | 23 | - | – | |
| Phobius | 138 | 143 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0328100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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