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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0330500 |
| Transcript ID | LotjaGi5g1v0330500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xylosyltransferase 1; TAIR: AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|A0A151U7T4|A0A151U7T4_CAJCA Xylosyltransferase 1; Found in the gene: LotjaGi5g1v0330500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64751738..64754857) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAGCTGAGAAGAAATGGCTATTCACGCTGTTCGTTGCAGCACTCGTCTCCCTCATGCTTCTCTTGATGTCTTCCTT CTCCGCCTTCAGCTCGCCGAAGGCGTTTCCCTCTCTGGTTCAGCATGGTTCTCACTACCCTCCTTCGTTTGCGTACTTTA TCTCCGGTGGAAACAGGGACAAGGATCGGATCTTGCGGTTGTTGCTGGCAGTTTATCATCCTCGGAATCGGTACCTTCTT CATCTGGGGATGGATGCTGGGGATGCAGAGAGAGCGGCTCTAGCTGCTGCTGTGAGGTCTGTGCCGGCGATTCGGGCTTT TGGGAACGTTGATGTGGTCGGTAAGGCTGAGTGGATCACCTATTTGGGGTCCTCCAATGTTGCCATCACTCTCCGAGCTG CGGCTATTATGCTGAAATTGGATAGTGGGTGGGATTGGTTCATCACTTTGAGTGCACGTGATTATCCTCTCATCACTCAG GATGGTATGCCAATTTTGTCATTTCTGTTTGCTCCATGGATTTGTGTACCTTGAATTTGATTTTGGATTGTGCTATGCTA AGATTGGTGTCATATTGATTGGAAATTTGAATATGTATGATTGGTTTTCAATCAATTCAACTAGCTTGGCAATTGACATG AATGATTCGATGTTAAGATTTTTGCATGTGTGGTGCCTTGGTACTCATGGGAAAGTTTCTGTTAAGCTTTTAGAAGATTT GTTTATATTGTCATCTTTTGTTCCTTTTGTTCACCTTTATATTGTCAAGTTGGCTTGTTTTAGGAAATTTGAGTAGATTT AATATTCAAATCAATGAGCTTGATCTAAGGTGCCAGTGTTCTCACTTCATTTATCCCAGATTATGGGAAAACAATGTCTT TTCATTGAATATCTTAGATGATAAGCTTAAATCTATGTATCTTAGCTTAAGTATTTATAGATGTTTTTCTTTTGTGGCCC TTGCACTATTTCTTTTATTCTTAATATGATACTTTTGTGAGTTTTCATCATTGTTAAGTTATTATTATTATTATTTTTAA TTTTAAGACCTGAAGTTTTAGGTTTAACGGAAAAGAGGTATACAGTTGAAAGAGGAGTCACAAATTAGGAGAGAGGAGTA TGGAGGTTGAATTGGTAGAACCATAGAAGGGTATTTAAGGAGGAAGGAGGGGTTCAAATGGGGATCTTGTAGAAGGGTAT GTTGAAAATAAAAGCAGTTAGAGTTACTTTAGTTAGTTAACTTCTGTTTCAGAGTCTGTTAGCTAATAGCTTATTAGTTA GCTTGTTAGTTTGTAGTTCTTTGTATAAATACACCAATACTACATTGTAAACATACAGAGAACTAGGGTGAAGGTTTCTT ATTCAGTCCTCTTTCTCTCTACTCTACCCCTCTCTTCTTCTTTCTATTTTTGCCTGTGCATGTTCGACAAACTGCTTTGG CATTGCATATTAATTTCCGCATAGAAGAGAGTGGTTCTAACCTGTGCTATTTATTCCTGAGATGAATGAATATCTTAAGT GCTTATGATTGCCAAAATCTGATAATGGACCACAATATTCTTCTGATTGCATGGGATTTTCTGTGACTGTTCATATTTGC TGAAGCTATGGGCTTCCAGATAGAGATAATTTTAGCGTCCTTGTGAAGTGGAATCTAAAGGTCGAATAAAGTTTCTGTTG GTGAATTGGCATTTGTTAGTCTGACTGTTTTTTTTTAAATTGGCAGTCTGACTGATATGGTGACTAGAGGGGAAAATTTT TCAAACCTTCTGTAGGACCTATTTTCTACACTAAAAGCATGACACCTGACATGTATTGTTATTTTTAGTTTTCTTAAAAA AGAAAACTATAAGAGACTGTTATTTTCGAGGTAGTTGCTACTGTTGAAAACTAAAAATAAAGGTAGTTGCATAAATGCTC ATATTGTTCTGAGTAATGACCTTTATTCACTGAATTGTGCTTATTGTGAGTTCATAGATGAGCCATATCTCATTTATATT CTTGTATCTCAGTTTGACAATTGTCTCTTTTCCTGACTTGTCTAAGTTACTGATCCGTGCTCTGTTTTCTTTATCAGATT TGTCCCATGTTTTCTCTTCAGTAAGGAGGGACCTAAATTTCATTGATCATACCGGTGACCTTGGATGGAAAGAGTATGAA AACTACCACTAGCTCTAGCTGCTACTTTGTGGCCATATTCAATTAGGCCTAGATCATTTATTTATGTACTCATCTGCCCA TGCAGGAGTGATAGGTTCCAACCTATTGTAGTTGATCCAGGGCTATATTTAGCTAGGAGAAGCCAAATTTTTCAGGCTAC AGAGAAGAGGGCAACACCTGATGCATTCAAACTCTTCACAGGTAAATCTGTTCTATCAGGCAAAAATGATTCGTGGGCAT CCGCCTAGTGTCCAGTGTGAGAAATGAAGAGAAGTAATGAATATGATATATGATGTATGTGATAAGGAGAGATAGAGAAA AATGAGGTGTATGTGAGGTGTCTAACTGTTTGGATGTCTAAGTATCATTATTGTTTCTCTCATGCTGTGTTTGCGTAACA CTGTTGCCTCAGGTTAATTATGTTGAATGCTTTCCTTGTCTGCAGGTTCACCATGGGTCATCTTGAGCAGACCCTTTCTG GAGTTCTGCATTTTTGGTTGGGATAATTTGCCTCGAACACTGCTGATGTATTTTACAAATGTGAAGTTATCCCAGGAAGG GTACTTTCACTCAGTCATTTGCAATGCACCAGAATTCAAGAACACAACAGTAAATGGCGACTTACGGTACATGATCTGGG ACAATCCTCCAAAGATGGAACCGCTCTTCCTGAACGCCTCTGTTTATGATCAGATGGTGGAAAGTGGAGCTGCTTTTGCA AGACAGTTCCAAGTTGATAACCCTGTGCTGGACATGATTGATGAAAAGATCCTCCGTCGCGGTCGCCATCAAGCTGCCCC AGGGGCATGGTGCACCGGGAGGAGGAGCTGGTGGGTGGATCCATGCTCCCAGTGGGGTGATGTCAATATCCTGAAGCCTG GTCCTCAGGCTAAGAAGCTTGAGGGGTCTGTTTCAAGCCTCCTTGATGACTTGGGCTCACAGACCAATCAGTGCCAGTGA
CDS sequence (LotjaGi5g1v0330500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCTGAGAAGAAATGGCTATTCACGCTGTTCGTTGCAGCACTCGTCTCCCTCATGCTTCTCTTGATGTCTTCCTT CTCCGCCTTCAGCTCGCCGAAGGCGTTTCCCTCTCTGGTTCAGCATGGTTCTCACTACCCTCCTTCGTTTGCGTACTTTA TCTCCGGTGGAAACAGGGACAAGGATCGGATCTTGCGGTTGTTGCTGGCAGTTTATCATCCTCGGAATCGGTACCTTCTT CATCTGGGGATGGATGCTGGGGATGCAGAGAGAGCGGCTCTAGCTGCTGCTGTGAGGTCTGTGCCGGCGATTCGGGCTTT TGGGAACGTTGATGTGGTCGGTAAGGCTGAGTGGATCACCTATTTGGGGTCCTCCAATGTTGCCATCACTCTCCGAGCTG CGGCTATTATGCTGAAATTGGATAGTGGGTGGGATTGGTTCATCACTTTGAGTGCACGTGATTATCCTCTCATCACTCAG GATGATTTGTCCCATGTTTTCTCTTCAGTAAGGAGGGACCTAAATTTCATTGATCATACCGGTGACCTTGGATGGAAAGA GAGTGATAGGTTCCAACCTATTGTAGTTGATCCAGGGCTATATTTAGCTAGGAGAAGCCAAATTTTTCAGGCTACAGAGA AGAGGGCAACACCTGATGCATTCAAACTCTTCACAGGTAAATCTGTTCTATCAGGCAAAAATGGTTCACCATGGGTCATC TTGAGCAGACCCTTTCTGGAGTTCTGCATTTTTGGTTGGGATAATTTGCCTCGAACACTGCTGATGTATTTTACAAATGT GAAGTTATCCCAGGAAGGGTACTTTCACTCAGTCATTTGCAATGCACCAGAATTCAAGAACACAACAGTAAATGGCGACT TACGGTACATGATCTGGGACAATCCTCCAAAGATGGAACCGCTCTTCCTGAACGCCTCTGTTTATGATCAGATGGTGGAA AGTGGAGCTGCTTTTGCAAGACAGTTCCAAGTTGATAACCCTGTGCTGGACATGATTGATGAAAAGATCCTCCGTCGCGG TCGCCATCAAGCTGCCCCAGGGGCATGGTGCACCGGGAGGAGGAGCTGGTGGGTGGATCCATGCTCCCAGTGGGGTGATG TCAATATCCTGAAGCCTGGTCCTCAGGCTAAGAAGCTTGAGGGGTCTGTTTCAAGCCTCCTTGATGACTTGGGCTCACAG ACCAATCAGTGCCAGTGA
Protein sequence (LotjaGi5g1v0330500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAEKKWLFTLFVAALVSLMLLLMSSFSAFSSPKAFPSLVQHGSHYPPSFAYFISGGNRDKDRILRLLLAVYHPRNRYLL HLGMDAGDAERAALAAAVRSVPAIRAFGNVDVVGKAEWITYLGSSNVAITLRAAAIMLKLDSGWDWFITLSARDYPLITQ DDLSHVFSSVRRDLNFIDHTGDLGWKESDRFQPIVVDPGLYLARRSQIFQATEKRATPDAFKLFTGKSVLSGKNGSPWVI LSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPLFLNASVYDQMVE SGAAFARQFQVDNPVLDMIDEKILRRGRHQAAPGAWCTGRRSWWVDPCSQWGDVNILKPGPQAKKLEGSVSSLLDDLGSQ TNQCQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 3 | 405 | 403 | 8.5E-233 | – | |
| PANTHER | 3 | 405 | 403 | 8.5E-233 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 23 | 16 | - | – | |
| Phobius | 24 | 31 | 8 | - | – | |
| Phobius | 32 | 405 | 374 | - | – | |
| Pfam | 50 | 306 | 257 | 4.2E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi5g1v0330500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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