Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0332900 |
| Transcript ID | LotjaGi5g1v0332900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT1G15170.1 MATE efflux family protein; Swiss-Prot: sp|Q8L731|DTX12_ARATH Protein DETOXIFICATION 12; TrEMBL-Plants: tr|G7IC53|G7IC53_MEDTR Protein DETOXIFICATION; Found in the gene: LotjaGi5g1v0332900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65002607..65007911) extracted from Lotus japonicus Gifu genome v1.2.
CTACAACAAAGAGAAAAAGAAGTGTGGAACGTAACGTGATAGAGAAATAATGATTTTCTAATCAATTAAGAATTTCTATA ACTCTTATAATATCATATATCATATATAAGGTACCAAAGAGGAGAGGGCCAAAACTTTCATACTGACCCATTCATATCAT ATATCAGACTCTGTCTGTGGGTTTGTGAAAGGACATAGAAGAGAAAGCATGGAAGAAGGTCTTCTAGCAAAACAGAGGGA TGAGAAAACAGAGCATGAACAGCAGAGCAAAGTAACATGGGAAATTTACGGTCAAGAAATGAAGAGGATTTGCCACATAG CAGGGCCTATGGTGGCGGTGATTTCATCCCAGTATTTGTTGCAGGTTGTTTCAACCATGATTGTTGGTCATCTTGGTGAG CTCTATCTCTCTAGCGCCTCCTTAGCCATCTCCTTTACTGGTGTCACGGGTTTCAGTTTTCTTGTAAGTTCACTACTCAC ACTACCCCTGTTTGCCTCTTTGACTTCTTCTTTTCAATAATTGCATTCAAAACTAATATGGCTTGGTCGATAAGTATGAA TCATTTCCTTTCGGAAGATTATGTGTTTGATTTTGATTGCGCTGTGTTTATGAGTGATATGTAAAGTAACATTATGATTG ACTTCTGGTTTAATGCTCTGGCCCCGGACCCACAATCTCATTCAAAGTTTTTCAATACTCATAAGTGATTTTCTCTTGTT TGATTGACCATGTCTCCGTTACTCTCTTATTTATTTTGTATTTGTTGTTATTAGAAAATGAGCTTGGCATTCTTATGTTT TATTCGTCAGATTGATTGTATTTTGGAAAACTAGAGATGAAAAATGTTACTACTTACTAGACATGTTCCACCCTAAATAA AGGATGAGAGAGATACAATAGAACAACTCAACAACAGTCACAAAGATAGATACATTTTTATGTGTGTGTGGAATAATGAC ATTTTGTTAAAAAAACAATTAGAATATAGGAGTTGGTAATTTGGTATCCTTCCTACTCATACAGTCATTTTGAAAGTTCT TCACATTTTGTCCTTGAGTGAAGAACAACTTTTTCAATTTTCTCTGTGCTTTTTATCTTTTTGTTGTTTATTTAGGGTTT ATGGGGTCCATTTCCTTAATGGTTGGATCTTGGATCTCATTCATGAATGCTGATTCATTTCACATTCTTCACATTTTCCT GAACGGTTTCATACAATTAGCTATTTGGGATAGTTTATTTGTATTTCTGTTTTCTAAGGTAGCAATGAAAAAATATGAAT GGAGTAAGTTTTTTGTTTGAAACTAATGGAGTAAGTTAATTAGGCAGGAATCGAATTCAAAAAAAAATAAAAATTAGGCA GGAATCTAGCTGTATACCTTCATCTTTGAAATAAGCAAGTTGGTTGGGATTTCCCCGTATACTATCGCTTGTGGAGAAAC ATTTATTGGGAGAGATCTACACACTTAATGTGATCTCAGAGCTTCGAAGGATTAGTCGTATGACTACCTACTGTGGAGAT ATATTGAGAAACCAAAAAAAGATAGTAAAGCAATATTAGCCCTAATTAAGCTTAAGGGGTGGAAGTATGGCCAATCGACC TGTTAGGGGTCGCGGCCCGACCCATCAAAGACCTGACTGGTTTATTATAAAGGTCAAACTTAGACTTTTAAAAAGTCCAA TTAACTATAAAGGTTAGGTTTAGGATTTAAAAACATGATTGGCTTGATATATAGGCTAACATAATATCATTTTTACTAAT AATATAAATAAATGTAAATGCAATGTAAAATGACATATTTGTCTGTTGGCCGGACCGTCTAAAAGGCTAGGACATATCTA AAAATTTGGCGTGTAACAGGCCACATGTTAGGTTTGAGTTGTAAAATTAAAATGACGATCAAGCTTGAGTTGTACAAAGT CTAACCTAATCTATTTTCACCCCCAAGCTTCACTATCGTTTCAATTTCTAGAAGGAAGATAAAATACATCACAATTGTTC TCTGTAAACTTTTATATTATGGAAATACTAAATGATTTTCATATTTTTGCAAACAATTCTCTATTAAAATCTAAATAACT TCACAGTCATTTTGTATTTTATAATTCAAAAAGCACTTCAACCTTTACAACTGTCATCATATCAGTATTAAAATGAACTC TATAAGCAAATACAACAATAGAAATATTAATGGTTTCTACCATGTTAGTTTATCATCTTTATCAATAATTTCTACCATGT TAGCTTGTTCAAAATTACCAAAATTTTCTTGTACCAATTACTCAGTGCATTGATGATTTGCACATACTAACAGATGGGAA TGGCTAGTGGACTTGAAACTATCTGTGGACAAGCTTATGGAGCTCAACAATATCACAGAATTGGAATGCAAACCTACACT GCCATATTCTCCCTCATAATTGTTTGCATTCCATTGTCTTTCATTTGGATCAACATAGAAAATATTCTAGTTTTCGTAGG CCAGGACCCTCTAATTGCACATGAAGCAGGGAGATTCACAATCTGGCTTGTTCCAGCACTTTTTGCATATGCAATTCTGC AGCCACTAGTTCGGTATTTCCAAATACAAAGCTTGATTCTTCCCATGCTTTTAAGCTCTTGTGTCACTCTTGTTATCCAT GTTCCACTATGTTGGGCCTTGGTTTTCAAGACTGAGCTGAATAATATTGGTGGAGCAATAGCAATGAGCATCTCGATCTG GTTAAATGTGATTTTTCTTGGATTGTACATGAGATACTCTTCTGCGTGTGCGAAAACCCGTGCTTCGATTTCTATGGAGA TGTTCCGAGGAATCGGGGAGTTCTTTCGTTTTGCTGTACCTTCTGCAGTCATGATTTGGTAATTTATTATCTTTCCCTTC AACTTAAATTCAAATTGCTAATATTGATGCTTTTTCAAGAATTGTATTGTTTTTTCCTTAATAACTCTATAACATGTTTC CTTTTCATGTTGATGACTTTAGCCTTGAATGGTGGTCATATGAACTGCTTGTCTTGCTGTCTGGTCTGTTACCAAATCCA CAACTTGAAACTTCAGTTCTATCAGTTTGGTATGTTCATCACTTTTTTCTTTTTGAAACTAACATATGATTTTCGAGCCC CCTTTTAAAGCATGTTTGTATAATATTTCTTTCCTAAGATTCAATTATGAAATTCATAAGCCACCCACACAAACTTCTCC CTGAAATTGACTTTGGCTCCAGAGTCGATTCTGGTTCTAGAAGAATTTCCAAACATGCACTTAGACTGCAATCTTCTCTT TTGAGATTTTGTGTACTAATGTGATTTTACTAACTCTATCATTCTCATGTACAGTCTCAATACCATTGCAACTCTCTATA CAATACCCTTTGGAATTGGTGCTGCAGCAAGGTTACATTAAGATACTTTTTCATACTACATGTCATAATATGTTTGGATT AACTTATTTTTCCTCAGAATCAATTCTAGCTCCTACTCACAGAAGCTTCTCTCCAGAATTGATTCTGCCATACATGCACT CACTATATATCTAAACTAATTATCCTTACTCCTATTTGATTATGCAGCACAAGAGTTTCAAATGAATTAGGAGCTGGGAA TCCATATGCTGCCCGCGTAGCCATGTTGGCTGCAATGTCTCTTGCAGCCATAGAGACGAGCATAGTGAGCGCATCGCTCT TCGCCTGCCGCCACGTTTTCGGTTACATCTTCAGCAATGAAAAGGAAGTTGTTGATTATGTCACTGTCATGGCACCTCTG GTTTGTTTATCTGTCATTCTTGACAGCGTACAAGGTGTCCTCGCAGGTACATGTCTCCATTGTCTATGCTTGACTAAGTT AATGTTAGGATTTCTTTTCTAAAATTGATTCAAAAGCCAGAATTAATTCTGGAGTGAAGCTTTTGTGAGTAGTTTTTGGC TGTCAAAATTGATTCTGAGGAAAAACAAGCTGATCTAAACATTCTATAAATCTTATATAGAAGACAAGCCTTTTCTCAGT TTATTTTACTATTCTTTTGGTTCAGGGATTGCTAGAGGTTGTGGATGGCAACACCTTGGGGTTTATGTTAATTTAGGGGC CTTTTACCTATGTGGGATTCCAGTTGCAGCTGCATTGGCATTTTGGATAAAAGTGGGAGGAAAAGGACTTTGGATTGGTA TTCAAGTTGGTGCTCTTGTTCAATCTGTTCTCCTTTCTATCATAACATGTTGCATAAACTGGGAACAACAGGTATATAAG CTCTTCACCCTTTTATTCTGAAAAATTACTCCAAACTTCAAATTTCATGAAGTTAAAAGGGCAATAATAACATATACCAA TTAATCTTGTGGTTAATATTTTTGTTATTCTTAATAAAAATGAATGCCCTTCAAATGTTTTTGGTCTTGCTAATGCAGGC AATGAAGGCTAGAAAGAGGTTACGTGATGATCAATTTTCAGCAGACAGTAGATTGATATAAAAGGCAATTTTTGAAGGCC AATTTTTGTGATGAGGGTGACAATTCTGCACAAAATGAGGAGTAGGAACTTATTCCCATTATTTGAAGTGTGGAACTAAA GTTTGACATGTATCATAGATTTATGGTAATTTCATTGCTTATCCTTGACAGTTCCAGTATTAATCTTTAACTAAAATTGT GCCATTCTATTCTATGAACTAATGTTAAAGAGACACCTACTTGCTAATAAGTAATAACCCAGATAAGTGGTGACATCTTT ACCATTTGCACATTTCAAAAAAAAAATTATTTACCATTTGTAATTGCGAAAAAAATGAATTATAAGTCTTGAACTTAGTC CAATTCAGACACGTCCATGTTGAGAGAAAATTAAAACCATACAAAAACCAGTGATCGATTTGGACAAAAGGTTAAGCAGG TCACGCTCGTTGATTGCAACTTTTGCTCTTGCTAAAAGCCAAGCATCATTGTCACATCACATACACTAGAAGCTGCTTAT AAAAAAAAAACATGCATTAGAAGCTGAAAATGTCTGCTAGCCTGGATCAATTGGTTAACATTTAAGTTTGCGCTTGTATT TACGTTTAATTTAGTCAGCACATTCACATGGAATGATAAGAAAACACATTCGATTTATCTTAAAATGTCCACCGATAAAA ATACAAACACACCCTAACAAGTTTGATGTGATGATGTTTTCCAAAACCTTTATAGAGTAATAAATAAATTATTCAATTGT TTTAGACATAAATAAATAAAATATTCAATTTCTGAAAAAAAGCCATGGAGCTAGAATTCGCAGTTGCGTGAGCAGTGCAA ACGGCTACAAAGGAACACATTAGAG
CDS sequence (LotjaGi5g1v0332900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGGTCTTCTAGCAAAACAGAGGGATGAGAAAACAGAGCATGAACAGCAGAGCAAAGTAACATGGGAAATTTA CGGTCAAGAAATGAAGAGGATTTGCCACATAGCAGGGCCTATGGTGGCGGTGATTTCATCCCAGTATTTGTTGCAGGTTG TTTCAACCATGATTGTTGGTCATCTTGGTGAGCTCTATCTCTCTAGCGCCTCCTTAGCCATCTCCTTTACTGGTGTCACG GGTTTCAGTTTTCTTATGGGAATGGCTAGTGGACTTGAAACTATCTGTGGACAAGCTTATGGAGCTCAACAATATCACAG AATTGGAATGCAAACCTACACTGCCATATTCTCCCTCATAATTGTTTGCATTCCATTGTCTTTCATTTGGATCAACATAG AAAATATTCTAGTTTTCGTAGGCCAGGACCCTCTAATTGCACATGAAGCAGGGAGATTCACAATCTGGCTTGTTCCAGCA CTTTTTGCATATGCAATTCTGCAGCCACTAGTTCGGTATTTCCAAATACAAAGCTTGATTCTTCCCATGCTTTTAAGCTC TTGTGTCACTCTTGTTATCCATGTTCCACTATGTTGGGCCTTGGTTTTCAAGACTGAGCTGAATAATATTGGTGGAGCAA TAGCAATGAGCATCTCGATCTGGTTAAATGTGATTTTTCTTGGATTGTACATGAGATACTCTTCTGCGTGTGCGAAAACC CGTGCTTCGATTTCTATGGAGATGTTCCGAGGAATCGGGGAGTTCTTTCGTTTTGCTGTACCTTCTGCAGTCATGATTTG CCTTGAATGGTGGTCATATGAACTGCTTGTCTTGCTGTCTGGTCTGTTACCAAATCCACAACTTGAAACTTCAGTTCTAT CAGTTTGTCTCAATACCATTGCAACTCTCTATACAATACCCTTTGGAATTGGTGCTGCAGCAAGCACAAGAGTTTCAAAT GAATTAGGAGCTGGGAATCCATATGCTGCCCGCGTAGCCATGTTGGCTGCAATGTCTCTTGCAGCCATAGAGACGAGCAT AGTGAGCGCATCGCTCTTCGCCTGCCGCCACGTTTTCGGTTACATCTTCAGCAATGAAAAGGAAGTTGTTGATTATGTCA CTGTCATGGCACCTCTGGTTTGTTTATCTGTCATTCTTGACAGCGTACAAGGTGTCCTCGCAGGGATTGCTAGAGGTTGT GGATGGCAACACCTTGGGGTTTATGTTAATTTAGGGGCCTTTTACCTATGTGGGATTCCAGTTGCAGCTGCATTGGCATT TTGGATAAAAGTGGGAGGAAAAGGACTTTGGATTGGTATTCAAGTTGGTGCTCTTGTTCAATCTGTTCTCCTTTCTATCA TAACATGTTGCATAAACTGGGAACAACAGGCAATGAAGGCTAGAAAGAGGTTACGTGATGATCAATTTTCAGCAGACAGT AGATTGATATAA
Protein sequence (LotjaGi5g1v0332900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEGLLAKQRDEKTEHEQQSKVTWEIYGQEMKRICHIAGPMVAVISSQYLLQVVSTMIVGHLGELYLSSASLAISFTGVT GFSFLMGMASGLETICGQAYGAQQYHRIGMQTYTAIFSLIIVCIPLSFIWINIENILVFVGQDPLIAHEAGRFTIWLVPA LFAYAILQPLVRYFQIQSLILPMLLSSCVTLVIHVPLCWALVFKTELNNIGGAIAMSISIWLNVIFLGLYMRYSSACAKT RASISMEMFRGIGEFFRFAVPSAVMICLEWWSYELLVLLSGLLPNPQLETSVLSVCLNTIATLYTIPFGIGAAASTRVSN ELGAGNPYAARVAMLAAMSLAAIETSIVSASLFACRHVFGYIFSNEKEVVDYVTVMAPLVCLSVILDSVQGVLAGIARGC GWQHLGVYVNLGAFYLCGIPVAAALAFWIKVGGKGLWIGIQVGALVQSVLLSIITCCINWEQQAMKARKRLRDDQFSADS RLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 14 | 471 | 458 | 1.3E-234 | – | |
| PANTHER | 14 | 471 | 458 | 1.3E-234 | – | |
| CDD | 30 | 464 | 435 | 3.18443E-173 | – | |
| TMHMM | 37 | 59 | 23 | - | – | |
| Phobius | 37 | 59 | 23 | - | – | |
| TIGRFAM | 40 | 437 | 398 | 2.0E-71 | ||
| Pfam | 40 | 199 | 160 | 4.7E-30 | ||
| Phobius | 60 | 64 | 5 | - | – | |
| Phobius | 65 | 92 | 28 | - | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 93 | 112 | 20 | - | – | |
| Phobius | 113 | 133 | 21 | - | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 134 | 152 | 19 | - | – | |
| TMHMM | 153 | 171 | 19 | - | – | |
| Phobius | 153 | 171 | 19 | - | – | |
| Phobius | 172 | 182 | 11 | - | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 183 | 203 | 21 | - | – | |
| Phobius | 204 | 208 | 5 | - | – | |
| Phobius | 209 | 231 | 23 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 232 | 251 | 20 | - | – | |
| Phobius | 252 | 272 | 21 | - | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| Pfam | 261 | 422 | 162 | 2.2E-28 | ||
| Phobius | 273 | 291 | 19 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 292 | 316 | 25 | - | – | |
| Phobius | 317 | 327 | 11 | - | – | |
| Phobius | 328 | 352 | 25 | - | – | |
| TMHMM | 332 | 354 | 23 | - | – | |
| Phobius | 353 | 371 | 19 | - | – | |
| TMHMM | 369 | 386 | 18 | - | – | |
| Phobius | 372 | 393 | 22 | - | – | |
| Phobius | 394 | 404 | 11 | - | – | |
| Phobius | 405 | 429 | 25 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Phobius | 430 | 434 | 5 | - | – | |
| Phobius | 435 | 460 | 26 | - | – | |
| TMHMM | 438 | 460 | 23 | - | – | |
| Phobius | 461 | 483 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0332900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…