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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0336500 |
| Transcript ID | LotjaGi5g1v0336500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0336500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65375662..65380697) extracted from Lotus japonicus Gifu genome v1.2.
GGCTTATTAAAAAAAAAAAAACAAAGAAAACCATGCCAGAACTGGAAAATTGGTGGTGTGGTGCACGCGCTGTGGGGTCC ATTGATCTTGTCTTTAGTGGTGGGAGTGAGTGAACACCACAGCCACACTTGAGGGTGAGTTAGGTGGAGCTAATCTCTGA TTAAGGAACACTAACCATGGTTAAGGATGTGTGTTACTATGTTGGAGTACACTGTGTTGTGGTACTCATGTCATCACACA TCACTGAGAGTGAGTGAGTGTGAGTGTGTGTCTTTCTGTGTGATTGAAGAGAACCATGTTCTTTCTTTGCATAAAGGTAT CTACTTTGTCGTTGGTTGGTTGTAAGAGACGAAAAATATCACTATGAGATTTCTGTTTTTGTGTACAAAAAAGTAAATGA AAAGGGTATTCTCAGTTGACACCATTGCTCACTGAGGTATGTGAGTGAGTGAGTGAGTGTGTGTGTGACAGTGATAAAGA GAGAGAGGAAAAAAAGAAGAATCTTTGGTGTCTGTCTCATCTTCCAACTAACACCACCTTGGATATTTTCAAGGGTAGGA ATTTTTTTTCACCTTGCCCTTCATTGCTCTTGTGAAAAGCTTGTTGCTTTCTTGCTTCTTCTGTTCATTCATGTGCTAGT TTAGCCTCTCTTGAGCTTCTACTTGCATCTATGGAAGATGGGGTAATCATGCATTTTAATAATTCTTGCTGTTTGAATCG ATTTAAAATTCCATGGCATTAATTCCTCCAATTCTCAGTGTTACTACTAGATTTTCCCTTTTTGTCTTGGTATGTCATGT TATTAATAACTCTATTACTAGATTCAGAAGTCTAGGATTTTCTCAAATTATTGCTATAGGTGTCTTTTTTTGTTGAGTGT GAGATTCTTTGGAATATAACTTGACAATGGCCTAAGTATTTAAACACTATCAAACCCAGCTGAAGGGGGTCTTTAATCTT TAGTGTGAGATTTTAGATTTGTCTGTCCTCTGTTGTTCTTTTCTCATGGGGTCTAAGTGCATATTGTAAGGATTGTATGC CAAAGCTGACACCATGTTTGGATGGGCTTCTCTTTTCTCATAATCAATTCTGAAACTCAAAGCTACTCCCATAGACTTCA CCCCAAAGTTGATTTTGTCTTTAGAATTAATTGTATAAGAATTTCCAAACATGCACTGAATTAAGCCATGTGGGTAAAGA AAACTGTTCATACTTTACTATAGATCTTTCTTGTGATGTAACATTATGTAATATTGATTCTGGTATTCTGAAGGACTTGC TAGTTTATTTGTTTTCAGGTTTCTGAGTTATGACTGTTTGAAGGACTGTGAACAATCAATATAAGCCTGCTTTGTCCCTT AAGAAGGTGATTTGGCCCATCGCCAAAATGGCTTCAAGGTCATATTCCAACTTGTTAGATCTCACTTCATGTGGCTCCCC ATCATCTTTTAGTAGAGAGAGGAAAAGGCTTCCTAGAGTGGCAACTGTTGCTGGAGTACTATCTGAACTTGATGATGAGG CCAGCAACAGTGTTGGCTCTGATGCTCCTTCCTCCATCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCCATA AAGGCACACAGGAAAGGCAATGGTGAGTGGGAATTCTCATGGGATGAAGACTCACTTCTCTTGCAGCTGAAAGATGGTCT TGGAGATGATGTGGAAACTATCTACATTGGTTGTCTCAAAGAAGAAATTGAGCCAAGTGAGCAAGATGATGTTGCTCAGT ACTTGCTTGACACTTTCAAGTGTGTCCCCACTTTCCTCCCTCCTGAGCTTTTCACTAAATTCTACCATGGATTCTGCAAA CAACACCTATGGCCTTTGTTTCACTACATGCTTCCCCTGTCACCTGATCTTGGTGGTAGATTTGATAGGTCCCTTTGGCA AGCTTATGTTTCTGTGAACAAGATATTTGCAGATAAAGTGATGGAAGTGATTACCCCTGATGAGGACTATGTTTGGGTCC ATGACTACCACTTGATGGTTCTTCCAACTTTTTTGAGGAAAAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCACAGT CCATTTCCTTCCTCTGAGATATACCGAACCCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTAAATTCAGACCTTAT AGGGTTTCATACTTTTGATTATGCAAGACATTTCCTCTCCTGCTGCAGTAGAATGCTTGGGATTTCTTATCAATCGAAGC GCGGCTACATTGGTCTTGAGTACTATGGAAGAACTGTGAGCATTAAGATTCTTCCGGTTGGGATTCACATAGGTCAGCTT CAATCTGTCATGAACCATCCTGAGACAGAAAGCAAGGTTGCTGAGTTACAAAACCAGTTCAAAGGTCAAACTGTGATGCT TGGGGTGGATGACATGGATATCTTCAAAGGAATCAGCTTGAAACTGTTGGCGATGGAACAGTTGCTTTTACAACATGCTG ATAAGAGGGGCAATCTTGTTCTGGTCCAAATAGCAAACCCGGCTCGAGGCCGGGGAAAGGATGTCCAAGAAGTGCAGTGC GAAACTTATGCTACTGTGAAAAGGATAAATGATACATTTGGAAGGTCTGGATATACACCAGTGATCTTGATTGATACACC ACTTCAAAGCTATGAGAGAATCGCTTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACC TTATACCTTATGAGTATGTCATTTGTAGACAAGGAAATGAGAAGATAGATGAGATTTTAGGGATAAACCCACTTACTCAA AAGAAAAGCATGCTGGTAGTGTCTGAGTTCATTGGTTGCTCTCCATCATTAAGTGGAGCAATTAGAGTGAATCCATGGAA TATTGATGCTGTTGCTGACGCTATGGATTCTGCTCTAAGGGTCCATGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATT ATAGGTATGTTAGCACACATGATGTTGCATATTGGGCGCGTAGCTTCTTGCAGGATTTAGGAAGGGCTTGTAGAGATCAT CAGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGCTTTCGAGTAATCGCTTTGGATCCCAACTTTAGAAAGCTATC TGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCACAGAGCAATTCTTTTGGATTATGATGGTACTATGGTGCAGC CTGGATCAATCAGCACAACGCCTAATGCTGAAGCTGTTGGCATCTTGAACAGCTTGTGCAAGGACACTAAGAATTGTGTT TTCATCGTAAGTGGTAAGGAGAGAAAGACTATTAATGAATGGTTTTCTTCTTGTGAAAGGCTAGGAATTGCTGCAGAACA TGGTTATTTTGTGAGGTATGTCTTTTTCCTTGGAAGTGTACTTATTGTGTTAAGTGGTGACTGTAAACTTTACCTGTGGT TTTTCTTTTTGGTGCAATAATTATTTACTAGTCAATTGTTTAATTTATTAAGAATGGTGAATTTTTTCTTCTCTCATATT TGGTACTTTTATTGTTAATAGAGTTGTCACTTCAAATGAACTCAAATGTTTTATTTTATGCATGAAAAAATATTGAGGAA AAACATGAATTATTTTCCTTGGCAGAGTTAGCTTCTGTGCTCAAACTGAAGTTTATCCTCTCTTTTTTTTTTCTCCAGGG CAAATCATAATGCACAATGGGAAGCATGTGTTTCTGTGCCTGATTTTGACTGGAAGCAGATTGCTGAACCAGTTATGCAA TTATACATGGAAACAACTGATGGTTCTAACATAGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTATGAGTTTGCAGACCG AGATTTCGGTTCATGCCAGGCTAAGGAGCTTCTTGATCATCTTGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAAA GTGGTCCTAACTATGTGGAAGTTAAACCTCAGGTCAGTAACAAATACTTGTCTTTCTACTTTTAATATATTATGATGTCA GTTATATTTAGTTGTAGTCACTTATATAGATCACTAAAGTGAATTCCAATATTTTTTTCATGAAAAATACTAAAGGGCAT TCAATGATTCTCCCATGCACTTTTTGTTCTGTCTTTGCAGTTTCTTTATCTTGGAACTTGAAAAAACCAACTTAAAACAT TGAATCCCCATTTTGTGTGCTGAGTCTTTGTCCTCCAACTTTTGGTGCAGGGTGTGAGTAAAGGGATTGTAGCAGAACGT CTTCTCTTAACAATGCAACAAAAGGGAGTGATTCCAGATTTTGTGTTGTGCATTGGGGATGATAAATCAGATGAGGACAT GTTTGGGGTAATAATGAATGCAAGGGCATCACTGTCCCCAGTTGCTGATGTGTTTCCTTGCACTGTTGGTCAGAAACCTA GCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATTTTCAGAATGTTGCATGGCCTTGCCAATGCTTCTGAGCAAGCT GCTAGAAATTCTTCTCAGTCTTCTCATTAAGCTTTTCTAATTTGTAGCACACATAATAGTTGCAGCTACATGGTATTTGT CTGTAGTGGGGTTATCCAGTATTAGATTGCTTGATCTATTTATAGCATGTTTGGATTAGTTTCGATTTCATCATAATCAA TTATGGCACTCAGAGGCTACTCAATAAGTTCCTCTCCATAATTGGTTCTGGCTTTAAAATCAGTTGTAGTAGAATTTCCA AACATGTACTTAATTTTCTGGTTGACATGCCTATATTTATTAAGATGTCTTGCTGGGTCATCCAACATACAACCTGATAC CCCAACCTTGTTGCAGCTACCAAGTGTTCTAGGTTGATAAATTATATGATGTATCAGATCATTTTGATGTATAATAACGT GATTCTTGAGTGGGAATGAACGCTAGGATTGTGAGCTAATTAATGTCTTCACTGATACAATGGCGGGTCCGATTTTAAAA ACATTGATATTTAGCCTTAGGCCTCCTGCAGCCAAAGAGTGCAAAACCTACATTAGCAACTTTTCTTTATGAAAAC
CDS sequence (LotjaGi5g1v0336500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAAGGTCATATTCCAACTTGTTAGATCTCACTTCATGTGGCTCCCCATCATCTTTTAGTAGAGAGAGGAAAAG GCTTCCTAGAGTGGCAACTGTTGCTGGAGTACTATCTGAACTTGATGATGAGGCCAGCAACAGTGTTGGCTCTGATGCTC CTTCCTCCATCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCCATAAAGGCACACAGGAAAGGCAATGGTGAG TGGGAATTCTCATGGGATGAAGACTCACTTCTCTTGCAGCTGAAAGATGGTCTTGGAGATGATGTGGAAACTATCTACAT TGGTTGTCTCAAAGAAGAAATTGAGCCAAGTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACTTTCAAGTGTGTCC CCACTTTCCTCCCTCCTGAGCTTTTCACTAAATTCTACCATGGATTCTGCAAACAACACCTATGGCCTTTGTTTCACTAC ATGCTTCCCCTGTCACCTGATCTTGGTGGTAGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCTGTGAACAAGATATT TGCAGATAAAGTGATGGAAGTGATTACCCCTGATGAGGACTATGTTTGGGTCCATGACTACCACTTGATGGTTCTTCCAA CTTTTTTGAGGAAAAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCACAGTCCATTTCCTTCCTCTGAGATATACCGA ACCCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTAAATTCAGACCTTATAGGGTTTCATACTTTTGATTATGCAAG ACATTTCCTCTCCTGCTGCAGTAGAATGCTTGGGATTTCTTATCAATCGAAGCGCGGCTACATTGGTCTTGAGTACTATG GAAGAACTGTGAGCATTAAGATTCTTCCGGTTGGGATTCACATAGGTCAGCTTCAATCTGTCATGAACCATCCTGAGACA GAAAGCAAGGTTGCTGAGTTACAAAACCAGTTCAAAGGTCAAACTGTGATGCTTGGGGTGGATGACATGGATATCTTCAA AGGAATCAGCTTGAAACTGTTGGCGATGGAACAGTTGCTTTTACAACATGCTGATAAGAGGGGCAATCTTGTTCTGGTCC AAATAGCAAACCCGGCTCGAGGCCGGGGAAAGGATGTCCAAGAAGTGCAGTGCGAAACTTATGCTACTGTGAAAAGGATA AATGATACATTTGGAAGGTCTGGATATACACCAGTGATCTTGATTGATACACCACTTCAAAGCTATGAGAGAATCGCTTA TTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCTTATGAGTATGTCATTTGTA GACAAGGAAATGAGAAGATAGATGAGATTTTAGGGATAAACCCACTTACTCAAAAGAAAAGCATGCTGGTAGTGTCTGAG TTCATTGGTTGCTCTCCATCATTAAGTGGAGCAATTAGAGTGAATCCATGGAATATTGATGCTGTTGCTGACGCTATGGA TTCTGCTCTAAGGGTCCATGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACACATGATGTTG CATATTGGGCGCGTAGCTTCTTGCAGGATTTAGGAAGGGCTTGTAGAGATCATCAGAGGAGGAGATGCTGGGGAATTGGT TTTGGTTTAGGCTTTCGAGTAATCGCTTTGGATCCCAACTTTAGAAAGCTATCTGTGGAACATATTGTTTCAGCTTATAA GAGGACCAAGCACAGAGCAATTCTTTTGGATTATGATGGTACTATGGTGCAGCCTGGATCAATCAGCACAACGCCTAATG CTGAAGCTGTTGGCATCTTGAACAGCTTGTGCAAGGACACTAAGAATTGTGTTTTCATCGTAAGTGGTAAGGAGAGAAAG ACTATTAATGAATGGTTTTCTTCTTGTGAAAGGCTAGGAATTGCTGCAGAACATGGTTATTTTGTGAGGGCAAATCATAA TGCACAATGGGAAGCATGTGTTTCTGTGCCTGATTTTGACTGGAAGCAGATTGCTGAACCAGTTATGCAATTATACATGG AAACAACTGATGGTTCTAACATAGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTATGAGTTTGCAGACCGAGATTTCGGT TCATGCCAGGCTAAGGAGCTTCTTGATCATCTTGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAAAGTGGTCCTAA CTATGTGGAAGTTAAACCTCAGGGTGTGAGTAAAGGGATTGTAGCAGAACGTCTTCTCTTAACAATGCAACAAAAGGGAG TGATTCCAGATTTTGTGTTGTGCATTGGGGATGATAAATCAGATGAGGACATGTTTGGGGTAATAATGAATGCAAGGGCA TCACTGTCCCCAGTTGCTGATGTGTTTCCTTGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTATTACTTGGAAGACAC AAGTGAGATTTTCAGAATGTTGCATGGCCTTGCCAATGCTTCTGAGCAAGCTGCTAGAAATTCTTCTCAGTCTTCTCATT AA
Protein sequence (LotjaGi5g1v0336500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASRSYSNLLDLTSCGSPSSFSRERKRLPRVATVAGVLSELDDEASNSVGSDAPSSISQERMIIVGNQLPIKAHRKGNGE WEFSWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFTKFYHGFCKQHLWPLFHY MLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVITPDEDYVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYR TLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNHPET ESKVAELQNQFKGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHADKRGNLVLVQIANPARGRGKDVQEVQCETYATVKRI NDTFGRSGYTPVILIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKIDEILGINPLTQKKSMLVVSE FIGCSPSLSGAIRVNPWNIDAVADAMDSALRVHESEKKMRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHQRRRCWGIG FGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSISTTPNAEAVGILNSLCKDTKNCVFIVSGKERK TINEWFSSCERLGIAAEHGYFVRANHNAQWEACVSVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEFADRDFG SCQAKELLDHLESVLANEPVSVKSGPNYVEVKPQGVSKGIVAERLLLTMQQKGVIPDFVLCIGDDKSDEDMFGVIMNARA SLSPVADVFPCTVGQKPSKAKYYLEDTSEIFRMLHGLANASEQAARNSSQSSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 849 | 849 | 0.0 | – | |
| PANTHER | 1 | 849 | 849 | 0.0 | – | |
| Gene3D | 51 | 292 | 242 | 5.1E-71 | – | |
| Pfam | 61 | 544 | 484 | 7.8E-185 | ||
| SUPERFAMILY | 61 | 548 | 488 | 1.57E-148 | – | |
| CDD | 61 | 544 | 484 | 0.0 | – | |
| Gene3D | 309 | 530 | 222 | 1.0E-73 | – | |
| TIGRFAM | 590 | 837 | 248 | 5.1E-35 | ||
| Gene3D | 591 | 699 | 109 | 2.2E-10 | ||
| SUPERFAMILY | 592 | 838 | 247 | 3.9E-41 | ||
| CDD | 593 | 829 | 237 | 3.85289E-62 | – | |
| TIGRFAM | 594 | 796 | 203 | 2.9E-17 | ||
| Pfam | 595 | 827 | 233 | 2.1E-73 | ||
| Gene3D | 717 | 853 | 137 | 1.2E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi5g1v0336500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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