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LotjaGi5g1v0337600.2

Overview

Field Value
Gene ID LotjaGi5g1v0337600
Transcript ID LotjaGi5g1v0337600.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Hydroxyacylglutathione hydrolase; TAIR: AT1G25375.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|Q5XGR8|LACB2_XENLA Endoribonuclease LACTB2; TrEMBL-Plants: tr|K7N2Y2|K7N2Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0337600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:65494470..65501658) extracted from Lotus japonicus Gifu genome v1.2.

CAAAGATTTTGTCCTAATCACATATTCATCCTTAAAAATGACACGTATACTTCTTAGTTAGCAGTCAACATTTGTTAGTT GCCACTCTCCATCCTCGTACTTCACACTCGATCCATTCACAGCTCCTCTTGCAATGGCAGCTCACAGACTCGCTTTGATC ATACACAACCCTTCCAACCACGACGAGTTTCTTCTCGTGAAACAGTCGCACCCTCCCAAATTCCACGATGAAGAATACGA CTCTTTCATTGATTCTGATCTCTGGGACTTACCCTCCGCACAGTTGAACCGGCAACAACCAGAGTCAGAGACCCCGATCG AGCTGGAGGTTCCTGCCTCACATTCTGAGGACTTCAAATCAAGCCAGTTCGACATCCGTTCAGCTCTCATTGAGGTGGTT TTTTTTGAATTTTTGAGGTTTTATGCTTTGGCCATGATGAATGATGATTTTGAGCTAAATGGGTTTCTAATTAGGTGTAT GAACAGCTAGGATTTGAAGCGGTTGTTGAGGGAGGGTGGAAGTTTCACAAGTATGTGAAGGAAGCTGCGTTTGGACCCGG TTTACCTGTTAACACAGTTTACATTGAGGGAAAATTGGTAGCTGAGGACAAGGACATGCAAGGTTTGTTTTTGTGTTTTG TTTATTTTTTTCCAAGTTTGTCATAGTTGGAATGAAAAGAACCGAACTACTAGTTAATATTACTAACATTAGAATTTGGT TAATCTAGTTTAGAGATGAGGATTGCTCTTAGAGAATATGGGATATGCTGCTAAGAACAATTAGATAGAATTTTATTTGT TAAAATGCATGCAAATGTTAACTTTCGTGCAACGTTGATGTATCTTTGCCTTTTCTTCATTTTTAAATTTTAATACCATG TATCTTAACAATGTATTTGATTAATTCTTTAAGTCTATAACTCTATATACAGATTCTCGTAAATGGATGTCCGTCAGAAG CTTTGATAACTGGCTTCTTGAAGTGAAACCACATGGTGATCGTGTTGGACCATTGGTAGTTGTTGGTCTTATGAATGACT CATCTATCTCTACAAAGTGGAAAGTCCCTCAAACCATAAACTATCAGGTTTGCTTTGTTCTAGTTCCCCTGTTTCCATGG TGGGGCATTTATTCGGTCTTAAAATTTCAGAAATAAATCTGCAAACGGCGATATAGGAGAAGCTTTGTTTTTTAAATTAC AATATCAAAAATGATCTGTATTCTGTAAGCAACTTGTTTTCACTTTTCAGTGAAGATTCTACAAGATCTTGTTTAAGGAA GTCTCATGCAGATTGATAATCTATGTAAACATTAATTTTTTGATCCCTGTCGGCCTGTCATGTCTGTCGTACTTAATGGT TATCTACCTCCCATCGATAATATCCCATAAAAAGAGAAAGTGCATTTTCACTTCCCTTTTATGTATTCACTGGTGAATAT GCTAATCACTTTGTTAACTGCTTATTTGTTACTTATAATAACATCCTCCAGATGAGCAAGTCTTCGCAACTCGAAATTTA CATCCAATTTGATCTATTCAGAGATTATAGCTGCACTCTGATATTTGTGTACTAGGAAAGGAAAAAGAATCTCACTTTTT ATTCTTCAAAGTCATTATTTTTATAATTTGGTAACAAGGAAGATTTATTTATATTTTCAGGAGTACCCACCTGGTGTTAT ACTTATACCTATGGGAAGTAGGACAGGAAAGCCTTTTCACACGACAAACATTATGGTGTTTGCACCTGAGAATGCTCTAA ATGATTCAAAGGATAGTAATTTTATTGCATGTGGAGATGCACTAATAATTGATCCCGGATGTCTATCAGAGTTCCATGAT GAGGTATACTTCCACATAACATCCAAACTTGTGTAGTTACTCCATGTCATTTTGTCCTTTGAGCCATCTTTTACCCTTTT GTTTTCTATTCTATGTAAATGGGATGTGTTGCATTTCATACTTCCTTCAGACTCAATTTTATCGATTTGACTGTTTATTA ATTATTTGTCATTATTTATTTATTGACAGCAAAAGCAAAAACAAGTCCTATTAGTTAAAATTTAACAGCCAATTTTTTCT TTTCTGCTCAAATACAAGTCACATGACTTTCGAGAAATTTACATTGAGATATAGTTTTTGATGTTTCATTCCCCTCAGAA TAGATCTTTTATAAGTGGTTTACTTTCCACATAATCTAACTCATTTTTGAATATGTTTCTTTAGTTAAATCTTATCTTAT GTCCCTGAAATTATCAGCTAAAGCAACTTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTTACTCATCATCACCAT GACCACGTAGATGGTAAGTCTCTGCTTAAACATTTGAGTTGTAATTTTTTTAAGTTAGATTATGCTATGAGTATAGGTGG AGAATTATGAGGTAGTTATCATGAATAGAAATTTTTATTTTGTTATTTCTGCACTTGGGCTAAGTGAGAACCAAAAAGCG GCTATAGACAACATACTCTTATCTTTGTTAGTTCTGCACTCAATTTCATCTCGTGAATCATCATGTTTTCTCTCTTGTAG AAGCTTTTATCTGTAACAGATACACACTTATACTTGGAAACTTAAATATCAGTTGTATTTTATAAATTGAATTGAGTATA CTCTTTTGATTCTAATGTATTTCACCCTTTATGACAGGTCTCTCAGTTATCCAGAAGTACAATCCTGATGCTACTCTGTT AGCACATGAAAATACCATGCGTCGCATAAGCAGAGGTTATAATATACATCCATGGTGAAATAATGTATATTCTGTGTTTG TTATGAACTTTCACAAAGTATTGATTTTAAGTAAATGATGAGTAATGGATCATGTCATTGTTATGAAATCAAAATGGTCA CACCAAAATTACAAAAATGACTTTTGGTATCATGTATATTATTAGTGCTCATCCATAATAACTATTTAGTGTGCTTGGTG TATTTTTCCTTAATATGGATCTATTGCTGTGGTTGTTGGCGAAACTTCGAAGAAAGGGGAAGCAGAAGCACTAGAGCTAG GTTTTTTCCCAAACGTGGTGGGCATTAATTTTTTGCACTGAGTAGAATTGAGAATTCTCCCAACACTAGTAATCAATAAA GAAAAAGGAATTGGTTTGATTATATATGCTGTTATATCTATTTTTTTACCTGCATGTTTTTAAATTAGTTTTTAAATTTT TTTACCTGCATGTTTCACCCATATGTTTTGACCTTATCTAACTTTGCCAAGCTGTTAAACTAATATTCTATGATAATACA GATGATTGGTCTCTTGGCTATACCTCTGTTACTGGAGATGAAGATATTTACATTGGTGATCAGAGATTGAGAGTTATTTT TGCACCGGTATTTTTTTACATTCATAATCCTTCTTTTAAAGGGTAGAGTATACCATGTTTTTTCAACAAAAAAAGAAGAG TATAACATGTTTCAGTCTATCCTCTTGCATGTATTGTACTATTTCTTCATTGTCTAATAGGACTGAAAAGGATTTCGGTT AAATTGATTCTTAACATTGCAAAACAGATGCTTCAAACAGTGAACCTGTGGGTTGTTCCTACTTTAAATCCAAAGTACTT TTGCATCATGGGTTGTCTCAGAGTTGTAAACCAAGAACCATCCATGACTACTTGTTGAATTGATACTTCACAGTACAAAA GATCCATCTCAAATATTACTTGAATTCTTAACTGTGTTTGTATTGAAGTCATAAGCATGGTTATAAAATATTATATTATC TATAGAGTTACTTTGATTTTCTTCTGAAGGTGGAGATTCTCTTTTGTTCAGGGACATACAGATGGTCATATGGCGCTGCT TCATGTGAATACTCATTCCTTAATTGTAGGTGATCATTGTGTGGGGTAAGATCGCCTACTGTATCATGGTTGATAAGCAA AGAGCAGCTCTTCTTATCTGGAGTACATACACATTCACAAAAATTATAGTTTGTGTATTTATGTATATTTGGATGGTTCT GAAACTTTCCATATATCTGAATACCTTATCTGGAATTATGTCTCATCGTCTCAGTTGCACTGTTTTAGATCTTGAATTTA GTAACCTATTTCTTTTAAAGTGCACAGAGAGTTGTAGGTTATGATTTTTTTTTTTCACTTTTGAAGTGCACAGGGGGTTT TTTCTGCAGTAGGTTATTCCAAATACTAAATGTGTCTATTATTTTATTCAAAGCCAAAGTTGTCTGTTAAAAAGTTAGAA GTTTTTGAATATTATGAGATTGTTGAAATTAACTTATTTGCTGTCTTAAAAATAAATAAGACTGCTACATTCTGATATTC CTCCGTTTTTTTGGTCAAAGAATTTATCAGACATATATATACAAGGGAGAACACAGATATGATAGGATTATTTTAAGAGG AATATTCTGTTTGATTTACCCCAGCAAAAACCTTTTTGAAATTTAACGAGGGGGAATAGACGGTCTTCCTAATTTTGATT TAGAAAGAGATGGTTTGGCATGCTGATGAAATGTCAAACCCGAATAGTTTCCTATTCATTTCCAATATTTTCCAAGACCT ATTACATCTTCAAGGTTTTTTTGTTATTTACTCCACTCTCCTAACATATTAGTTCAATTTATTTCAGTCAGGGAAGTGCT TTATTGGACATAAATTCTGGTGGAAATATGATGGTAAGTGCAAAAATACCTTGTATGTTAGAAATGCCTTAATTTTTGTT ATTATATTATAGACTATAAGTACTAGATTCACCAAAAATAATATTGTAGACAGAGTAAGAACCGTTACTCTGTATTGCTA GCTTCAGCTTGTCTAAAATGAATGGTGCACTCCCTCCAATTTAGAGCATAAAGTCCACTTTAACTCAGTAACCATCGATA AAAGAAAATAATATTAATAAAATCACTGTAATAGATGTTCTTTTGTTTAATGTTATTGTCATTTACAGGAGTACTTCCAA ACCACATACAAATTTCTGGAGCTTGCACCACATGTCTTAATACCAATGCACGGGAGAGTAAATCTCTGGCCAAAGCAGAT GCTGTGTGGATATCTGAAGTATTAACCATCAATCACTTCCTTCCTTTGACTGAACAAATTATTGGTCACAGTTTGACGTT TTGTCAGATTCAATAACTGCGAGGATTGTTATCGTTGTTTTCAGGAATCGTAGGAGTAGAGAAGCTAATATCTTGGAAGC AATTCAAGGTGGAGCCAAGACATTGTTTGACATTGTTGCATATGTATATTCTGATGTTGACCGTCGGGCCTGGATTTATG CATCATCAAATGTGAGGCTCCATGTGGATCATCTGGCCCATCAACATAAGTTACCAAAGGTATTAACCAATATGCTTCAA GCTTCATACCCGCTAACTATCTTTGAGAAATTCTTAGTATCGATTGATGAAAAATCCACCATGCCCATGGGCGTATCAAG GCCTAGGATTTCTAGCCTTGTCAGCTCTCTTTGCTTGGTTGTTGGTATTTACATTTACTGCGTGCCCTGATCTCTCCCTT TGGCCTTTTACCCACCTCTAGGGTAAAAAGGCTTTGGTTGTTGTTATGTTATATCTGATACATTCATTTTTATTGTATTA TTATTTATTAATAAGTTTTATTGGACTAGCAAAATAACCTTGAGGCTTGACTGACCCAATATCCAGTATGGGTTTGATAT GCATGCATTGCTTAGTACTTACACACTAGATCTTTTTTTGGCTCCCTTCATTTATTATTTTTACTTTTACTCCTTCATTA CCCAAAGCTCTGTCGTGCTTCATTTTTTTTAAAGATAGAAAATAACTAAGACAGGTCTGTGATTTTTCTGATTCAAGTGT TTAATCTAGAATTTTCTATTTTCCTCTATTAGGTGAAGTGAACCAGATGTGACACTGGTTCTAATCTCCATATTTTTCGT ATTCATTTGTGATTATTTTGGATGGCATAATTGTGAATGATTAATGGGAATGCAATTCTAATCTTATCTTGAGAATATTG TTCACAAGCATATTTGAATTAGTGACATACCTACATTCCAGATTGAGTGAAACTACAATTTTTGTGAGAATGTGCAGGAT TTTTCTGTAGAAAATTTCAATTCCAGTTTGGTTACATTTGCCGACAGTGTGGGTAAATTATAAGTATGAAGAGCTGCACT GGCTGGCTCTCTGACTACCTACCACCAGCTTCTTCAATTGCATTGAAATAATTGTGAGAGTGGCTGTTATTCTCTTGTGG AACTGACAGAACAAACTGCATCTGCCTTCTTAGGATTTTTCAATCCAGAATTTCAAAAATACCTGTGGGCTGCGTTTTCT ATCTCGATGGATATGGGCATACACTAGTGGCTGTTTACATCTAAGCAAATCTTCATTTCTTATTACTGGTGCTCTGGTTG GCATCGCTGTATCAGTGTATTGTACTGTCAAAAACAAGTTCAGTAGATAGACAGACATGTGCACCTTCATGGGAGAGTTG CATTCTACTTGGTGATTAATAAGCGGCGTCTCTTGATGAATGCATGCTGAAATTGATCACGTAGACTTGCTGCCAAGTAT TTACTGCTTTCTCCTACCATCAAGCTTTCTTGTATTTCTATTGCTTATGGGGGTGTCTATAGAAGCATGGGTGTCTGTGT TGTTGTTTAATATAATTAACTTAATTGCAGCGTTGAGTGAAAAATAGTTACTCTTCCTCTCCTTATGTGAGAGTTTGAGA GTTTATGTTCCATTAATGAAGAAATGATGAAATTTGCATTTTTTTGCAAATTGTGAACTGGTGACATTTGAAGCATTAAA TGGTCAACATTGGAGAAAAGTCATGGCCGGCGAAATTCATGTCATAGAGAAGAATGAAACATGAGAATTGACTGATTTGC TTGGAGATCAGAGACTAATTAGTGTTAAGTGGGTTCACAAAACAAAATACAAGAGACAATCGCAATATTTGCAATAGTAT ATAGCATTTCATGTTCATGCCTTTGATTTAGACTGAATAGCTGCATAGAAATACAGCCGTCATTGATGGAAATAATATAA TGTTCACCCTCAAAGCCTTTTCAAATTTAACTAGCTTTCAGATTATTCAGATGGTGCATGAGAAGTCATGTCATACTGCT CATTATTTCTGAAATACAACAGCCTAGAATTTTAAAACTTCAATTTCTTTCCCTTATAATTGGACGAAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0337600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCTCACAGACTCGCTTTGATCATACACAACCCTTCCAACCACGACGAGTTTCTTCTCGTGAAACAGTCGCACCC TCCCAAATTCCACGATGAAGAATACGACTCTTTCATTGATTCTGATCTCTGGGACTTACCCTCCGCACAGTTGAACCGGC AACAACCAGAGTCAGAGACCCCGATCGAGCTGGAGGTTCCTGCCTCACATTCTGAGGACTTCAAATCAAGCCAGTTCGAC ATCCGTTCAGCTCTCATTGAGGTGTATGAACAGCTAGGATTTGAAGCGGTTGTTGAGGGAGGGTGGAAGTTTCACAAGTA TGTGAAGGAAGCTGCGTTTGGACCCGGTTTACCTGTTAACACAGTTTACATTGAGGGAAAATTGGTAGCTGAGGACAAGG ACATGCAAGATTCTCGTAAATGGATGTCCGTCAGAAGCTTTGATAACTGGCTTCTTGAAGTGAAACCACATGGTGATCGT GTTGGACCATTGGTAGTTGTTGGTCTTATGAATGACTCATCTATCTCTACAAAGTGGAAAGTCCCTCAAACCATAAACTA TCAGGAGTACCCACCTGGTGTTATACTTATACCTATGGGAAGTAGGACAGGAAAGCCTTTTCACACGACAAACATTATGG TGTTTGCACCTGAGAATGCTCTAAATGATTCAAAGGATAGTAATTTTATTGCATGTGGAGATGCACTAATAATTGATCCC GGATGTCTATCAGAGTTCCATGATGAGCTAAAGCAACTTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTTACTCA TCATCACCATGACCACGTAGATGGTCTCTCAGTTATCCAGAAGTACAATCCTGATGCTACTCTGTTAGCACATGAAAATA CCATGCGTCGCATAAGCAGAGATGATTGGTCTCTTGGCTATACCTCTGTTACTGGAGATGAAGATATTTACATTGGTGAT CAGAGATTGAGAGTTATTTTTGCACCGGGACATACAGATGGTCATATGGCGCTGCTTCATGTGAATACTCATTCCTTAAT TGTAGGTGATCATTGTGTGGGTCAGGGAAGTGCTTTATTGGACATAAATTCTGGTGGAAATATGATGGAGTACTTCCAAA CCACATACAAATTTCTGGAGCTTGCACCACATGTCTTAATACCAATGCACGGGAGAGTAAATCTCTGGCCAAAGCAGATG CTGTGTGGATATCTGAAGAATCGTAGGAGTAGAGAAGCTAATATCTTGGAAGCAATTCAAGGTGGAGCCAAGACATTGTT TGACATTGTTGCATATGTATATTCTGATGTTGACCGTCGGGCCTGGATTTATGCATCATCAAATGTGAGGCTCCATGTGG ATCATCTGGCCCATCAACATAAGTTACCAAAGGATTTTTCTGTAGAAAATTTCAATTCCAGTTTGGTTACATTTGCCGAC AGTGTGGGTAAATTATAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0337600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAHRLALIIHNPSNHDEFLLVKQSHPPKFHDEEYDSFIDSDLWDLPSAQLNRQQPESETPIELEVPASHSEDFKSSQFD IRSALIEVYEQLGFEAVVEGGWKFHKYVKEAAFGPGLPVNTVYIEGKLVAEDKDMQDSRKWMSVRSFDNWLLEVKPHGDR VGPLVVVGLMNDSSISTKWKVPQTINYQEYPPGVILIPMGSRTGKPFHTTNIMVFAPENALNDSKDSNFIACGDALIIDP GCLSEFHDELKQLVTALPRRLVVFVTHHHHDHVDGLSVIQKYNPDATLLAHENTMRRISRDDWSLGYTSVTGDEDIYIGD QRLRVIFAPGHTDGHMALLHVNTHSLIVGDHCVGQGSALLDINSGGNMMEYFQTTYKFLELAPHVLIPMHGRVNLWPKQM LCGYLKNRRSREANILEAIQGGAKTLFDIVAYVYSDVDRRAWIYASSNVRLHVDHLAHQHKLPKDFSVENFNSSLVTFAD SVGKL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23131
138 465 328 1.5E-128 –
PANTHER
PTHR23131:SF0
138 465 328 1.5E-128 –
SMART
SM00849
224 390 167 1.4E-17
IPR001279
Gene3D
G3DSA:3.60.15.10
225 399 175 1.3E-28
IPR036866
SUPERFAMILY
SSF56281
232 462 231 2.66E-37
IPR036866
Pfam
PF00753
233 353 121 3.1E-6
IPR001279
Gene3D
G3DSA:1.10.10.10
400 473 74 2.0E-8
IPR036388

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0337600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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