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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0344100 |
| Transcript ID | LotjaGi5g1v0344100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hemerythrin class glutathione S-transferase; TAIR: AT3G54290.1 hemerythrin HHE cation-binding domain protein; Swiss-Prot: sp|C0SPA7|YUKB_BACSU ESX secretion system protein YukB; TrEMBL-Plants: tr|I1NFE3|I1NFE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0344100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66115628..66118307) extracted from Lotus japonicus Gifu genome v1.2.
ACACAGAAAAACATAGTCAAATAAATCTCTTGTTCTCTCTCTGTCACTCTTTCTCTCCCTCTCATTGCACAGTTCTTGCA TCTGCAACTGTAACAATCTCTCTGGTCGCTACAACCCAAAATACGGTGTCGTTTTCAGTTCGTTTAACCATCACCATTCC CCATTTTCTCCTTCTTCTTCTTCCAAATACCGGTTTCTTACTCTAATCTCCAACCATAACCAATACGCTAACACCTTCTT CTTCTTCTTCACCTTCGTTTTCTCTGTCTGCAACCAATCAATGGGAAACTGTTTCGGCAAGTCGGAGAAATTGACGGCGG AGATTGTACCTCACGGCGGAGCTAGAGTGTATCCGACGGTGAGGCTATACGGTTCGCCGAAGAGCATTCTCGCCGCTTAC ATTCGTTTCGCTCTCCTCCACAAGTCCGTTTCGCCGGACTTCGTTCCATCTGACAACCGGGCTGACCCGGTTACGCTCCA GGTTGGATCCGAGGTTGTTTCGGGTTCCCGCGAAACGCTGCTCCGGTTCATAGACGAGCGGTTTCCGAGCCCGCCGTTGG GTGGTGGTGAGGAGGAGGAGGGGGGAACGGCGCCGGTGATGGTGACGGTGACTAGGCTGCAGCATAAGAGCATGTTGTGG CATGTGGAGAGGGTGTTGAGGTGGGCGGAGGATCTGGCGGCGCGTGGAGGGAAGAAGGCTGTTGATCCGTCGGTGGGGAC CCCGAAGATGGAGGTGAGGAAATTCGCGAGGAGCTACTCCGAGCTGCTGGAGGTGATGATGGAACATGCTCAGATGGAGG AGACTCTCCTCTTCCCTTTGTTTGATTCAGCTGATCGAGGTAACAATAACATAACACTTTCATATAGAATAGATTTTGGC CCGGAAGAGCTTATTTGAGTTTATTGAGGCGCTTATTCGAGTTTAAGAGTTTATGTAAATAAATTGTTTCGAACTTATTT TCATAAGAGGTTCATATTAACTTATTAATAAGAGCTTATACTAATCCAAAATCTATGCTCAGCTTCTTTTAATAAGATTT TCTAACTAGCTTGTGAATAAGTGCTTATGCGATAAACACTTAATTAAGCTTTTTACCCAAACTCACCCTTTTTGTTATAT TTTTTTTCAATTTTTGTTTATTTGCTATTTTCATGTTTTAATTTGATTATTTATTGATGAATTTGGAACTTGAAAGTACA TACATAATTTTGCTTTATGTTGATTTTTCTTCTTGTTTTGTTGGTGAGAATCTGAGGTAGTAATGGTTGTTACTTGATTT TGTGAGGGAGAAAGTAAGAGGTTTGTTGTGAGTAACATATGTAAAAGGTTTAACTTGTCTATGAAGCAATGCTCTGAATG AATATATTAATTATGTCTGTAATGAAAAAAAATGCAGGGCTCTCTAAAGCTGCAAAAGAGGAACATGCTAGGGACCTACC TCTCATGAATGGCATCAAAGAAGTCATCAAATCTGTAGGGGTTTTGAACCCTGGGAGCCCTGATTACCGTGAGGCTCTGT GTAACCTTTCTGCGCGGCTCAAGTTATTGCAGGTAAGGTCAACTCCTATAATGATTTTAGCTATGTTTGGATATTTGTTA GCACTGGTTTGGCAAGCGGTCATTAGCACTCACTTTAAAATTGTGTCTTACACCATTGGCTTAGTGAACATTGATTATTG TTACTAGCATTTTCATGATCTCTGATTTTTTTATTTGGGACCCTCATTTAGTTGTTTAATATGTTATTAGCGGCAGTGCA AGCTACATTTCAAGGAGGAGGAAGTGGAATTACTTCCACTAATGGAGGCATTGGAGCTGAGCAAAGAGGGAGAGGAGAGT GCACTGGAGCAATGTTTTGATGTGATGCAAGGAACACATGGTCGTTTGTTTAAGTTCCTTCTTGAAGGGCTCCGACCTCG TGATGCTATGAAGTACTTGGACTTGATCAGCAAGTGTAGGGACAGAGAACGAATGGAATCCATGCTTCAAATGATAGTTA AGTGACTACAGATCTTGTTAATGGCTTCAATTATTAAGCACACATGGATGAGCTGTGAAGCCTGCTTAGTCAATAGATGT AAAATTGAGTTTTTCTTCTTTTTGATCAAGTCCATCTTCTCAAGGAAGCACCCAGCACATGGGTAGAAAGACAATCTCAT AGTGTACTCTGCTTTTGTGGTATGGGACATTGTTCTCGAACCTGTCAGCCTGGCCTTTTGATTAAGGGAACAGAAAGCAG GAATAGCATTTGGAAAAGCAGGGAGCTTTCCTTTTTCCTTTTCCTCATGATAGTTTGGATAAGGTGGTCATGAATATATT CTCAAGTAATGTACATATGCAAGTGAGTGCTCCCAAAAAATTTCAATAGTGCTTGGAGTATACTAGTTTGCTGGTTTTGA TTGGTAATACCATAATCTGTTGAAATTTGTTTAACCAAGTCCTTGTTTGTGTTTGTCCTTGTCCACTAGCTGATAGGTTG CAACCCAGCTTCCTTCCTACCTAAGTATTTGTTTGGATCTATTGTTCAAATTCCATAAGTGAATAAGTAATAGGAATTGA AACTAAAAACTTTTTTTTTAACTAATACATGTATCCTCCACAATCATGTTCCAATCCTGTTCATGGTTGATATTTTTTTG GGTCTAATAAGGGTAGATATAAGAGGTAACTCTATTCAAG
CDS sequence (LotjaGi5g1v0344100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAACTGTTTCGGCAAGTCGGAGAAATTGACGGCGGAGATTGTACCTCACGGCGGAGCTAGAGTGTATCCGACGGT GAGGCTATACGGTTCGCCGAAGAGCATTCTCGCCGCTTACATTCGTTTCGCTCTCCTCCACAAGTCCGTTTCGCCGGACT TCGTTCCATCTGACAACCGGGCTGACCCGGTTACGCTCCAGGTTGGATCCGAGGTTGTTTCGGGTTCCCGCGAAACGCTG CTCCGGTTCATAGACGAGCGGTTTCCGAGCCCGCCGTTGGGTGGTGGTGAGGAGGAGGAGGGGGGAACGGCGCCGGTGAT GGTGACGGTGACTAGGCTGCAGCATAAGAGCATGTTGTGGCATGTGGAGAGGGTGTTGAGGTGGGCGGAGGATCTGGCGG CGCGTGGAGGGAAGAAGGCTGTTGATCCGTCGGTGGGGACCCCGAAGATGGAGGTGAGGAAATTCGCGAGGAGCTACTCC GAGCTGCTGGAGGTGATGATGGAACATGCTCAGATGGAGGAGACTCTCCTCTTCCCTTTGTTTGATTCAGCTGATCGAGG GCTCTCTAAAGCTGCAAAAGAGGAACATGCTAGGGACCTACCTCTCATGAATGGCATCAAAGAAGTCATCAAATCTGTAG GGGTTTTGAACCCTGGGAGCCCTGATTACCGTGAGGCTCTGTGTAACCTTTCTGCGCGGCTCAAGTTATTGCAGCGGCAG TGCAAGCTACATTTCAAGGAGGAGGAAGTGGAATTACTTCCACTAATGGAGGCATTGGAGCTGAGCAAAGAGGGAGAGGA GAGTGCACTGGAGCAATGTTTTGATGTGATGCAAGGAACACATGGTCGTTTGTTTAAGTTCCTTCTTGAAGGGCTCCGAC CTCGTGATGCTATGAAGTACTTGGACTTGATCAGCAAGTGTAGGGACAGAGAACGAATGGAATCCATGCTTCAAATGATA GTTAAGTGA
Protein sequence (LotjaGi5g1v0344100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNCFGKSEKLTAEIVPHGGARVYPTVRLYGSPKSILAAYIRFALLHKSVSPDFVPSDNRADPVTLQVGSEVVSGSRETL LRFIDERFPSPPLGGGEEEEGGTAPVMVTVTRLQHKSMLWHVERVLRWAEDLAARGGKKAVDPSVGTPKMEVRKFARSYS ELLEVMMEHAQMEETLLFPLFDSADRGLSKAAKEEHARDLPLMNGIKEVIKSVGVLNPGSPDYREALCNLSARLKLLQRQ CKLHFKEEEVELLPLMEALELSKEGEESALEQCFDVMQGTHGRLFKFLLEGLRPRDAMKYLDLISKCRDRERMESMLQMI VK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 322 | 322 | 2.1E-188 | – | |
| PANTHER | 1 | 322 | 322 | 2.1E-188 | – | |
| Pfam | 108 | 255 | 148 | 8.5E-18 | ||
| CDD | 109 | 254 | 146 | 2.80292E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0344100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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