Domain Predictions — View

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cd12108

Source: CDD

Description

Hr-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 30

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0162139.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-related isoform 2 [Theobroma cacao] gi\|508708207\|gb\|EOY00104.1\|	Domains G3DSA:1.20.120.520 IPR012312 PF01814 PTHR21319 PTHR21319:SF9 cd12108	6
Lj0g3v0162139.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-related isoform 1 [Theobroma cacao] gi\|508708206\|gb\|EOY00103.1\|	Domains G3DSA:1.20.120.520 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF9 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	21
Lj0g3v0162139.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-related isoform 1 [Theobroma cacao] gi\|508708206\|gb\|EOY00103.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF9 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj0g3v0298719.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein isoform 1 [Theobroma cacao] gi\|508727329\|gb\|EOY19226.1\|	Domains G3DSA:1.20.120.520 IPR012312 PF01814 PTHR35739 PTHR35739:SF1 cd12108	6
Lj2g3v0719120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj4g3v1600410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger and CHY zinc finger domain-containing protein [Medicago truncatula] gi\|357504223\|ref\|XP_003622400.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.20.120.520 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR013083 IPR017921 NON_CYTOPLASMIC_DOMAIN PF05495 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF17 SM00184 SSF161219 SSF161245 SSF57850 TRANSMEMBRANE cd00162 cd12108 mobidb-lite	24
Lj4g3v3099530.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj4g3v3099540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj5g3v2240780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein isoform 1 [Theobroma cacao] gi\|508727329\|gb\|EOY19226.1\|	Domains G3DSA:1.20.120.520 IPR012312 PF01814 PTHR35739 PTHR35739:SF1 cd12108	6
LotjaGi2g1v0205100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1KIY9\|I1KIY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0205100	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi2g1v0205100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1KIZ0\|I1KIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0205100	Domains G3DSA:1.20.120.520 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 PF01814 PF05495 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SSF161219 SSF161245 cd12108	19
LotjaGi2g1v0205100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1KIY9\|I1KIY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0205100	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 IPR001841 IPR008913 IPR012312 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SSF161219 SSF161245 SSF57850 cd12108	21
LotjaGi2g1v0205100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1KIY9\|I1KIY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0205100	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi2g1v0205100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1KIY9\|I1KIY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0205100	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi2g1v0274900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|I1L2P4\|I1L2P4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0274900	Domains Coil G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF43 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	27
LotjaGi4g1v0244600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT1G74770.1 zinc ion binding protein; Swiss-Prot: sp\|F4HVS0\|BTSL2_ARATH Zinc finger protein BRUTUS-like At1g74770; TrEMBL-Plants: tr\|I1MTQ0\|I1MTQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0244600	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 NON_CYTOPLASMIC_DOMAIN PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF39 SM00184 SSF161219 SSF161245 SSF57850 TRANSMEMBRANE cd12108 cd16464 mobidb-lite	31
LotjaGi4g1v0244600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT1G74770.1 zinc ion binding protein; Swiss-Prot: sp\|F4HVS0\|BTSL2_ARATH Zinc finger protein BRUTUS-like At1g74770; TrEMBL-Plants: tr\|I1MTQ0\|I1MTQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0244600	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 NON_CYTOPLASMIC_DOMAIN PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF39 SM00184 SSF161219 SSF161245 SSF57850 TRANSMEMBRANE cd12108 cd16464 mobidb-lite	31
LotjaGi4g1v0453800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.10 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.11 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 PF01814 PF05495 PF13639 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	23
LotjaGi4g1v0453800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains Coil G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	27
LotjaGi4g1v0453800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 IPR001841 IPR008913 IPR012312 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 cd12108	21
LotjaGi4g1v0453800.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR039512 PF01814 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF57850 cd12108 cd16464	23
LotjaGi4g1v0453800.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|K7L4Y8\|K7L4Y8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi4g1v0453800.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein, putative; TAIR: AT3G18290.1 zinc finger protein-like protein; Swiss-Prot: sp\|Q8LPQ5\|BTS_ARATH Zinc finger protein BRUTUS; TrEMBL-Plants: tr\|A0ZT53\|A0ZT53_LOTJA Putative E3 ubiquitin ligase; Found in the gene: LotjaGi4g1v0453800	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR008913 IPR012312 IPR013083 IPR017921 IPR037274 IPR037275 IPR039512 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF35 SM00184 SSF161219 SSF161245 SSF57850 cd12108 cd16464	26
LotjaGi5g1v0344100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hemerythrin class glutathione S-transferase; TAIR: AT3G54290.1 hemerythrin HHE cation-binding domain protein; Swiss-Prot: sp\|C0SPA7\|YUKB_BACSU ESX secretion system protein YukB; TrEMBL-Plants: tr\|I1NFE3\|I1NFE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0344100	Domains IPR012312 PF01814 PTHR35739 PTHR35739:SF2 cd12108	5
LotjaGi6g1v0020800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hemerythrin HHE cation-binding domain protein; TAIR: AT3G54290.1 hemerythrin HHE cation-binding domain protein; Swiss-Prot: sp\|C0SPA7\|YUKB_BACSU ESX secretion system protein YukB; TrEMBL-Plants: tr\|A0A072VJ07\|A0A072VJ07_MEDTR Hemerythrin HHE cation-binding domain protein; Found in the gene: LotjaGi6g1v0020800	Domains G3DSA:1.20.120.520 IPR012312 PF01814 PTHR35739 PTHR35739:SF2 cd12108	6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd12108	CDD	1	3.33